RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 KLF6Q99612 283 aaPredicted RBP15.87■□□□□ 0.13
CUX1-214ENST00000550008 SIK2Q9H0K1 926 aa15.87■□□□□ 0.13
CUX1-214ENST00000550008 A0A0G2JND7 137 aa15.87■□□□□ 0.13
CUX1-214ENST00000550008 P4HA2O15460 535 aa15.87■□□□□ 0.13
CUX1-214ENST00000550008 TGFB2P61812 414 aa15.87■□□□□ 0.13
CUX1-214ENST00000550008 SNAPC2Q13487 334 aa15.87■□□□□ 0.13
CUX1-214ENST00000550008 KIZQ2M2Z5 673 aa15.87■□□□□ 0.13
CUX1-214ENST00000550008 IER5Q5VY09 327 aa15.87■□□□□ 0.13
CUX1-214ENST00000550008 ACAD10Q6JQN1 1059 aa15.87■□□□□ 0.13
CUX1-214ENST00000550008 XRRA1Q6P2D8 792 aa15.87■□□□□ 0.13
CUX1-214ENST00000550008 EPM2AIP1Q7L775 607 aaPredicted RBP15.87■□□□□ 0.13
CUX1-214ENST00000550008 SPATC1LQ9H0A9 340 aa15.87■□□□□ 0.13
CUX1-214ENST00000550008 RAP1GAPP47736 663 aa15.87■□□□□ 0.13
CUX1-214ENST00000550008 EIF3EP60228 445 aaKnown RBP15.87■□□□□ 0.13
CUX1-214ENST00000550008 PPATQ06203 517 aa15.87■□□□□ 0.13
CUX1-214ENST00000550008 KIF22Q14807 665 aa15.87■□□□□ 0.13
CUX1-214ENST00000550008 C9orf131Q5VYM1 1079 aa15.87■□□□□ 0.13
CUX1-214ENST00000550008 ERAP1Q9NZ08 941 aa15.87■□□□□ 0.13
CUX1-214ENST00000550008 CST8O60676 142 aa15.86■□□□□ 0.13
CUX1-214ENST00000550008 SPATS2Q86XZ4 545 aaKnown RBP15.86■□□□□ 0.13
CUX1-214ENST00000550008 C4orf33Q8N1A6 199 aa15.86■□□□□ 0.13
CUX1-214ENST00000550008 EMC1Q8N766 993 aa15.86■□□□□ 0.13
CUX1-214ENST00000550008 MYH2Q9UKX2 1941 aa15.86■□□□□ 0.13
CUX1-214ENST00000550008 CCDC78A2IDD5 438 aa15.86■□□□□ 0.13
CUX1-214ENST00000550008 CRCPO75575 148 aa15.86■□□□□ 0.13
CUX1-214ENST00000550008 CYP3A4P08684 503 aa15.86■□□□□ 0.13
CUX1-214ENST00000550008 RPSAP08865 295 aaKnown RBP15.86■□□□□ 0.13
CUX1-214ENST00000550008 TAF1CQ15572 869 aaPredicted RBP15.86■□□□□ 0.13
CUX1-214ENST00000550008 UGCGQ16739 394 aa15.86■□□□□ 0.13
CUX1-214ENST00000550008 TRIM68Q6AZZ1 485 aa15.86■□□□□ 0.13
CUX1-214ENST00000550008 METTL23Q86XA0 190 aa15.86■□□□□ 0.13
CUX1-214ENST00000550008 KCTD17Q8N5Z5 321 aa15.86■□□□□ 0.13
CUX1-214ENST00000550008 MCUQ8NE86 351 aa15.86■□□□□ 0.13
CUX1-214ENST00000550008 FIS1Q9Y3D6 152 aa15.86■□□□□ 0.13
CUX1-214ENST00000550008 TGFB1I1O43294 461 aa15.86■□□□□ 0.13
CUX1-214ENST00000550008 MYBL2P10244 700 aa15.86■□□□□ 0.13
CUX1-214ENST00000550008 MDH1P40925 334 aaKnown RBP15.86■□□□□ 0.13
CUX1-214ENST00000550008 RFC5P40937 340 aa15.86■□□□□ 0.13
CUX1-214ENST00000550008 MORC4Q8TE76 937 aa15.86■□□□□ 0.13
CUX1-214ENST00000550008 PARD3BQ8TEW8 1205 aa15.86■□□□□ 0.13
CUX1-214ENST00000550008 PPP4R1Q8TF05 950 aa15.86■□□□□ 0.13
CUX1-214ENST00000550008 RSRC1Q96IZ7 334 aaKnown RBP15.86■□□□□ 0.13
CUX1-214ENST00000550008 CALR3Q96L12 384 aaKnown RBP15.86■□□□□ 0.13
CUX1-214ENST00000550008 KCTD10Q9H3F6 313 aa15.86■□□□□ 0.13
CUX1-214ENST00000550008 KLHL8Q9P2G9 620 aaPredicted RBP15.86■□□□□ 0.13
CUX1-214ENST00000550008 TNPO2O14787 897 aaKnown RBP15.85■□□□□ 0.13
CUX1-214ENST00000550008 ITGA8P53708 1063 aa15.85■□□□□ 0.13
CUX1-214ENST00000550008 CACNB2Q08289 660 aaPredicted RBP15.85■□□□□ 0.13
CUX1-214ENST00000550008 SEPT6Q14141 434 aa15.85■□□□□ 0.13
CUX1-214ENST00000550008 CCDC117Q8IWD4 279 aaPredicted RBP15.85■□□□□ 0.13
CUX1-214ENST00000550008 MAML1Q92585 1016 aa15.85■□□□□ 0.13
CUX1-214ENST00000550008 CPB2Q96IY4 423 aa15.85■□□□□ 0.13
CUX1-214ENST00000550008 RIPK3Q9Y572 518 aa15.85■□□□□ 0.13
CUX1-214ENST00000550008 CYP3A7-CYP3A51PA0A087WV96 503 aa15.85■□□□□ 0.13
CUX1-214ENST00000550008 CCDC160A6NGH7 325 aa15.85■□□□□ 0.13
CUX1-214ENST00000550008 ZNF263O14978 683 aa15.85■□□□□ 0.13
CUX1-214ENST00000550008 GH1P01241 217 aa15.85■□□□□ 0.13
CUX1-214ENST00000550008 CYP3A7P24462 503 aa15.85■□□□□ 0.13
CUX1-214ENST00000550008 MAP1SQ66K74 1059 aaPredicted RBP15.85■□□□□ 0.13
CUX1-214ENST00000550008 PHLDB3Q6NSJ2 640 aa15.85■□□□□ 0.13
CUX1-214ENST00000550008 SMC1BQ8NDV3 1235 aa15.85■□□□□ 0.13
CUX1-214ENST00000550008 GPRC5AQ8NFJ5 357 aa15.85■□□□□ 0.13
CUX1-214ENST00000550008 RDM1Q8NG50 284 aa15.85■□□□□ 0.13
CUX1-214ENST00000550008 CCT8L2Q96SF2 557 aa15.85■□□□□ 0.13
CUX1-214ENST00000550008 MRIQ9BWK5 157 aa15.85■□□□□ 0.13
CUX1-214ENST00000550008 SLC13A1Q9BZW2 595 aa15.85■□□□□ 0.13
CUX1-214ENST00000550008 OGTO15294 1046 aa15.85■□□□□ 0.13
CUX1-214ENST00000550008 MOCS2O96007 188 aaPredicted RBP15.85■□□□□ 0.13
CUX1-214ENST00000550008 CYP2C8P10632 490 aa15.85■□□□□ 0.13
CUX1-214ENST00000550008 COILP38432 576 aaPredicted RBP15.85■□□□□ 0.13
CUX1-214ENST00000550008 MAPK7Q13164 816 aa15.85■□□□□ 0.13
CUX1-214ENST00000550008 ITGB3BPQ13352 177 aaPredicted RBP15.85■□□□□ 0.13
CUX1-214ENST00000550008 KRT35Q92764 455 aa15.85■□□□□ 0.13
CUX1-214ENST00000550008 C17orf75Q9HAS0 396 aa15.85■□□□□ 0.13
CUX1-214ENST00000550008 IFT122Q9HBG6 1241 aa15.85■□□□□ 0.13
CUX1-214ENST00000550008 HBP1O60381 514 aa15.85■□□□□ 0.13
CUX1-214ENST00000550008 BAG2O95816 211 aa15.85■□□□□ 0.13
CUX1-214ENST00000550008 APRTP07741 180 aa15.85■□□□□ 0.13
CUX1-214ENST00000550008 LSP1P33241 339 aa15.85■□□□□ 0.13
CUX1-214ENST00000550008 NOP9Q86U38 636 aaKnown RBP15.85■□□□□ 0.13
CUX1-214ENST00000550008 FEZF2Q8TBJ5 459 aa15.85■□□□□ 0.13
CUX1-214ENST00000550008 KLC2Q9H0B6 622 aa15.85■□□□□ 0.13
CUX1-214ENST00000550008 ROBO3Q96MS0 1386 aa15.84■□□□□ 0.13
CUX1-214ENST00000550008 CXCL8P10145 99 aa15.84■□□□□ 0.13
CUX1-214ENST00000550008 CHN1P15882 459 aa15.84■□□□□ 0.13
CUX1-214ENST00000550008 FAXCQ5TGI0 409 aa15.84■□□□□ 0.13
CUX1-214ENST00000550008 KCNV1Q6PIU1 500 aa15.84■□□□□ 0.13
CUX1-214ENST00000550008 ERO1BQ86YB8 467 aa15.84■□□□□ 0.13
CUX1-214ENST00000550008 TTC13Q8NBP0 860 aa15.84■□□□□ 0.13
CUX1-214ENST00000550008 AFG1LQ8WV93 481 aa15.84■□□□□ 0.13
CUX1-214ENST00000550008 ATXN7L3BQ96GX2 97 aa15.84■□□□□ 0.13
CUX1-214ENST00000550008 HPDLQ96IR7 371 aa15.84■□□□□ 0.13
CUX1-214ENST00000550008 AGAP3Q96P47 875 aa15.84■□□□□ 0.13
CUX1-214ENST00000550008 PRMT1Q99873 361 aaKnown RBP15.84■□□□□ 0.13
CUX1-214ENST00000550008 INTUQ9ULD6 942 aa15.84■□□□□ 0.13
CUX1-214ENST00000550008 ADRB2P07550 413 aa15.84■□□□□ 0.13
CUX1-214ENST00000550008 ZNF286BP0CG31 522 aa15.84■□□□□ 0.13
CUX1-214ENST00000550008 CYP2C9P11712 490 aa15.84■□□□□ 0.13
CUX1-214ENST00000550008 PRLRP16471 622 aa15.84■□□□□ 0.13
CUX1-214ENST00000550008 SLC1A1P43005 524 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms