RNA–Protein interactions for RNA: ENST00000549417.5

LIN7A-202, Transcript of lin-7 homolog A, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene LIN7A, Length 905 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7A-202ENST00000549417 CCDC69A6NI79 296 aa7.54□□□□□ -1.2
LIN7A-202ENST00000549417 TK2O00142 265 aa7.54□□□□□ -1.2
LIN7A-202ENST00000549417 GAS7O60861 476 aa7.54□□□□□ -1.2
LIN7A-202ENST00000549417 MICAL2O94851 1124 aa7.54□□□□□ -1.2
LIN7A-202ENST00000549417 APBB3O95704 486 aa7.54□□□□□ -1.2
LIN7A-202ENST00000549417 CFIP05156 583 aa7.54□□□□□ -1.2
LIN7A-202ENST00000549417 CYP3A4P08684 503 aa7.54□□□□□ -1.2
LIN7A-202ENST00000549417 CYP21A2P08686 494 aa7.54□□□□□ -1.2
LIN7A-202ENST00000549417 FTH1P19P0C7X4 201 aa7.54□□□□□ -1.2
LIN7A-202ENST00000549417 ITPKBP27987 946 aa7.54□□□□□ -1.2
LIN7A-202ENST00000549417 ABCG1P45844 678 aa7.54□□□□□ -1.2
LIN7A-202ENST00000549417 ATXN3P54252 364 aaPredicted RBP7.54□□□□□ -1.2
LIN7A-202ENST00000549417 NPEPPSP55786 919 aa7.54□□□□□ -1.2
LIN7A-202ENST00000549417 ROR1Q01973 937 aa7.54□□□□□ -1.2
LIN7A-202ENST00000549417 CYP4F3Q08477 520 aa7.54□□□□□ -1.2
LIN7A-202ENST00000549417 SPIRE1Q08AE8 756 aa7.54□□□□□ -1.2
LIN7A-202ENST00000549417 TWF1Q12792 350 aa7.54□□□□□ -1.2
LIN7A-202ENST00000549417 GRSF1Q12849 480 aaKnown RBP eCLIP7.54□□□□□ -1.2
LIN7A-202ENST00000549417 AP3B2Q13367 1082 aa7.54□□□□□ -1.2
LIN7A-202ENST00000549417 TRIP6Q15654 476 aaKnown RBP7.54□□□□□ -1.2
LIN7A-202ENST00000549417 XKR3Q5GH77 459 aa7.54□□□□□ -1.2
LIN7A-202ENST00000549417 NAIF1Q69YI7 327 aaPredicted RBP7.54□□□□□ -1.2
LIN7A-202ENST00000549417 IQCEQ6IPM2 695 aa7.54□□□□□ -1.2
LIN7A-202ENST00000549417 PDXDC1Q6P996 788 aa7.54□□□□□ -1.2
LIN7A-202ENST00000549417 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.54□□□□□ -1.2
LIN7A-202ENST00000549417 TMTC3Q6ZXV5 915 aa7.54□□□□□ -1.2
LIN7A-202ENST00000549417 ANO5Q75V66 913 aa7.54□□□□□ -1.2
LIN7A-202ENST00000549417 MIER3Q7Z3K6 550 aa7.54□□□□□ -1.2
LIN7A-202ENST00000549417 TTC30AQ86WT1 665 aa7.54□□□□□ -1.2
LIN7A-202ENST00000549417 ARID3BQ8IVW6 561 aaPredicted RBP7.54□□□□□ -1.2
LIN7A-202ENST00000549417 ELMOD1Q8N336 334 aa7.54□□□□□ -1.2
LIN7A-202ENST00000549417 NCOA7Q8NI08 942 aa7.54□□□□□ -1.2
LIN7A-202ENST00000549417 DDX27Q96GQ7 796 aaKnown RBP7.54□□□□□ -1.2
LIN7A-202ENST00000549417 ZNF512Q96ME7 567 aaPredicted RBP7.54□□□□□ -1.2
LIN7A-202ENST00000549417 FBRSL1Q9HCM7 1045 aaKnown RBP7.54□□□□□ -1.2
LIN7A-202ENST00000549417 ASAH2Q9NR71 780 aa7.54□□□□□ -1.2
LIN7A-202ENST00000549417 CEP72Q9P209 647 aa7.54□□□□□ -1.2
LIN7A-202ENST00000549417 INSL5Q9Y5Q6 135 aa7.54□□□□□ -1.2
LIN7A-202ENST00000549417 NBPF19A0A087WUL8 3843 aa7.53□□□□□ -1.2
LIN7A-202ENST00000549417 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.53□□□□□ -1.2
LIN7A-202ENST00000549417 INO80B-WBP1J3KQ70 363 aa7.53□□□□□ -1.2
LIN7A-202ENST00000549417 DPYSL4O14531 572 aa7.53□□□□□ -1.2
LIN7A-202ENST00000549417 PTGESO14684 152 aa7.53□□□□□ -1.2
LIN7A-202ENST00000549417 MSH4O15457 936 aa7.53□□□□□ -1.2
LIN7A-202ENST00000549417 B4GALT5O43286 388 aa7.53□□□□□ -1.2
LIN7A-202ENST00000549417 SH3BP5O60239 455 aa7.53□□□□□ -1.2
LIN7A-202ENST00000549417 OPHN1O60890 802 aa7.53□□□□□ -1.2
LIN7A-202ENST00000549417 ARF4P18085 180 aaPredicted RBP7.53□□□□□ -1.2
LIN7A-202ENST00000549417 FGFR3P22607 806 aa7.53□□□□□ -1.2
LIN7A-202ENST00000549417 PTGER3P43115 390 aa7.53□□□□□ -1.2
LIN7A-202ENST00000549417 ELAVL2Q12926 359 aaKnown RBP7.53□□□□□ -1.2
LIN7A-202ENST00000549417 PSMD2Q13200 908 aa7.53□□□□□ -1.2
LIN7A-202ENST00000549417 DMC1Q14565 340 aa7.53□□□□□ -1.2
LIN7A-202ENST00000549417 ITPRIPL2Q3MIP1 535 aa7.53□□□□□ -1.2
LIN7A-202ENST00000549417 USP39Q53GS9 565 aaKnown RBP7.53□□□□□ -1.2
LIN7A-202ENST00000549417 TMEM196Q5HYL7 178 aa7.53□□□□□ -1.2
LIN7A-202ENST00000549417 LRCH2Q5VUJ6 765 aa7.53□□□□□ -1.2
LIN7A-202ENST00000549417 RTL10Q7L3V2 364 aa7.53□□□□□ -1.2
LIN7A-202ENST00000549417 HAUS6Q7Z4H7 955 aa7.53□□□□□ -1.2
LIN7A-202ENST00000549417 TICAM2Q86XR7 235 aa7.53□□□□□ -1.2
LIN7A-202ENST00000549417 TMEFF1Q8IYR6 380 aa7.53□□□□□ -1.2
LIN7A-202ENST00000549417 HACE1Q8IYU2 909 aa7.53□□□□□ -1.2
LIN7A-202ENST00000549417 FRMD1Q8N878 549 aa7.53□□□□□ -1.2
LIN7A-202ENST00000549417 SPRYD3Q8NCJ5 442 aa7.53□□□□□ -1.2
LIN7A-202ENST00000549417 ZNF461Q8TAF7 563 aa7.53□□□□□ -1.2
LIN7A-202ENST00000549417 PSPC1Q8WXF1 523 aaKnown RBP7.53□□□□□ -1.2
LIN7A-202ENST00000549417 RLN3Q8WXF3 142 aa7.53□□□□□ -1.2
LIN7A-202ENST00000549417 CRYGNQ8WXF5 182 aa7.53□□□□□ -1.2
LIN7A-202ENST00000549417 ADAMTS14Q8WXS8 1223 aa7.53□□□□□ -1.2
LIN7A-202ENST00000549417 LENG9Q96B70 501 aa7.53□□□□□ -1.2
LIN7A-202ENST00000549417 SMG9Q9H0W8 520 aaKnown RBP7.53□□□□□ -1.2
LIN7A-202ENST00000549417 EVLQ9UI08 416 aaPredicted RBP7.53□□□□□ -1.2
LIN7A-202ENST00000549417 TEX15Q9BXT5 2789 aa7.53□□□□□ -1.2
LIN7A-202ENST00000549417 CNTNAP5Q8WYK1 1306 aa7.52□□□□□ -1.2
LIN7A-202ENST00000549417 TNRC6BQ9UPQ9 1833 aaKnown RBP7.52□□□□□ -1.2
LIN7A-202ENST00000549417 MYO16Q9Y6X6 1858 aa7.52□□□□□ -1.21
LIN7A-202ENST00000549417 A0A087WV48 116 aa7.52□□□□□ -1.21
LIN7A-202ENST00000549417 OTOL1A6NHN0 477 aaPredicted RBP7.52□□□□□ -1.21
LIN7A-202ENST00000549417 UPK3BL1B0FP48 263 aa7.52□□□□□ -1.21
LIN7A-202ENST00000549417 UPK3BL2E5RIL1 263 aa7.52□□□□□ -1.21
LIN7A-202ENST00000549417 B3GAT3O94766 335 aa7.52□□□□□ -1.21
LIN7A-202ENST00000549417 ABLIM3O94929 683 aa7.52□□□□□ -1.21
LIN7A-202ENST00000549417 PRAMEF12O95522 483 aa7.52□□□□□ -1.21
LIN7A-202ENST00000549417 CD59P13987 128 aa7.52□□□□□ -1.21
LIN7A-202ENST00000549417 AXLP30530 894 aa7.52□□□□□ -1.21
LIN7A-202ENST00000549417 BRCC3P46736 316 aa7.52□□□□□ -1.21
LIN7A-202ENST00000549417 JAK3P52333 1124 aa7.52□□□□□ -1.21
LIN7A-202ENST00000549417 PTH1RQ03431 593 aa7.52□□□□□ -1.21
LIN7A-202ENST00000549417 KCNC4Q03721 635 aa7.52□□□□□ -1.21
LIN7A-202ENST00000549417 SRSF1Q07955 248 aaKnown RBP eCLIP7.52□□□□□ -1.21
LIN7A-202ENST00000549417 NCBP1Q09161 790 aaKnown RBP7.52□□□□□ -1.21
LIN7A-202ENST00000549417 MAPK6Q16659 721 aa7.52□□□□□ -1.21
LIN7A-202ENST00000549417 ARHGAP29Q52LW3 1261 aa7.52□□□□□ -1.21
LIN7A-202ENST00000549417 TRIM68Q6AZZ1 485 aa7.52□□□□□ -1.21
LIN7A-202ENST00000549417 ANO7Q6IWH7 933 aa7.52□□□□□ -1.21
LIN7A-202ENST00000549417 CASC1Q6TDU7 716 aa7.52□□□□□ -1.21
LIN7A-202ENST00000549417 SLCO6A1Q86UG4 719 aa7.52□□□□□ -1.21
LIN7A-202ENST00000549417 MICU3Q86XE3 530 aa7.52□□□□□ -1.21
LIN7A-202ENST00000549417 MB21D2Q8IYB1 491 aaPredicted RBP7.52□□□□□ -1.21
LIN7A-202ENST00000549417 TCEAL8Q8IYN2 117 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms