RNA–Protein interactions for RNA: ENST00000548130.5

SMARCC2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 5

Gene SMARCC2, Length 1,238 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-205ENST00000548130 LRPAP1P30533 357 aa9.64□□□□□ -0.87
SMARCC2-205ENST00000548130 RPL9P32969 192 aaKnown RBP9.64□□□□□ -0.87
SMARCC2-205ENST00000548130 LTBRP36941 435 aa9.64□□□□□ -0.87
SMARCC2-205ENST00000548130 KCNQ1P51787 676 aa9.64□□□□□ -0.87
SMARCC2-205ENST00000548130 UBE2HP62256 183 aa9.64□□□□□ -0.87
SMARCC2-205ENST00000548130 MRPS5P82675 430 aaKnown RBP9.64□□□□□ -0.87
SMARCC2-205ENST00000548130 DSG1Q02413 1049 aa9.64□□□□□ -0.87
SMARCC2-205ENST00000548130 ADAM15Q13444 863 aa9.64□□□□□ -0.87
SMARCC2-205ENST00000548130 KCNB1Q14721 858 aa9.64□□□□□ -0.87
SMARCC2-205ENST00000548130 COL19A1Q14993 1142 aa9.64□□□□□ -0.87
SMARCC2-205ENST00000548130 TMEM132DQ14C87 1099 aa9.64□□□□□ -0.87
SMARCC2-205ENST00000548130 CTC1Q2NKJ3 1217 aa9.64□□□□□ -0.87
SMARCC2-205ENST00000548130 USP41Q3LFD5 358 aa9.64□□□□□ -0.87
SMARCC2-205ENST00000548130 RTP2Q5QGT7 225 aa9.64□□□□□ -0.87
SMARCC2-205ENST00000548130 KIAA0319Q5VV43 1072 aa9.64□□□□□ -0.87
SMARCC2-205ENST00000548130 SPATA1Q5VX52 437 aa9.64□□□□□ -0.87
SMARCC2-205ENST00000548130 PRSS55Q6UWB4 352 aaPredicted RBP9.64□□□□□ -0.87
SMARCC2-205ENST00000548130 CBWD2Q8IUF1 395 aa9.64□□□□□ -0.87
SMARCC2-205ENST00000548130 EFCAB13Q8IY85 973 aa9.64□□□□□ -0.87
SMARCC2-205ENST00000548130 SMYD4Q8IYR2 804 aaPredicted RBP9.64□□□□□ -0.87
SMARCC2-205ENST00000548130 RDH13Q8NBN7 331 aa9.64□□□□□ -0.87
SMARCC2-205ENST00000548130 BEST2Q8NFU1 509 aa9.64□□□□□ -0.87
SMARCC2-205ENST00000548130 ATXN2LQ8WWM7 1075 aaKnown RBP9.64□□□□□ -0.87
SMARCC2-205ENST00000548130 TIGD1Q96MW7 591 aa9.64□□□□□ -0.87
SMARCC2-205ENST00000548130 CDCA3Q99618 268 aaPredicted RBP9.64□□□□□ -0.87
SMARCC2-205ENST00000548130 TTPALQ9BTX7 342 aa9.64□□□□□ -0.87
SMARCC2-205ENST00000548130 EMILIN2Q9BXX0 1053 aa9.64□□□□□ -0.87
SMARCC2-205ENST00000548130 SLC4A5Q9BY07 1137 aa9.64□□□□□ -0.87
SMARCC2-205ENST00000548130 ASB7Q9H672 318 aa9.64□□□□□ -0.87
SMARCC2-205ENST00000548130 CHST7Q9NS84 486 aa9.64□□□□□ -0.87
SMARCC2-205ENST00000548130 RBAKQ9NYW8 714 aaPredicted RBP9.64□□□□□ -0.87
SMARCC2-205ENST00000548130 STK39Q9UEW8 545 aa9.64□□□□□ -0.87
SMARCC2-205ENST00000548130 MAPK8IP1Q9UQF2 711 aa9.64□□□□□ -0.87
SMARCC2-205ENST00000548130 NUB1Q9Y5A7 615 aa9.64□□□□□ -0.87
SMARCC2-205ENST00000548130 PCDHA5Q9Y5H7 936 aa9.64□□□□□ -0.87
SMARCC2-205ENST00000548130 IRAK3Q9Y616 596 aa9.64□□□□□ -0.87
SMARCC2-205ENST00000548130 ZNF233A6NK53 670 aa9.63□□□□□ -0.87
SMARCC2-205ENST00000548130 KIAA0391O15091 583 aaKnown RBP9.63□□□□□ -0.87
SMARCC2-205ENST00000548130 TEX28O15482 410 aa9.63□□□□□ -0.87
SMARCC2-205ENST00000548130 XPOTO43592 962 aaKnown RBP9.63□□□□□ -0.87
SMARCC2-205ENST00000548130 HRO43593 1189 aa9.63□□□□□ -0.87
SMARCC2-205ENST00000548130 IL18RAPO95256 599 aa9.63□□□□□ -0.87
SMARCC2-205ENST00000548130 SMC2O95347 1197 aa9.63□□□□□ -0.87
SMARCC2-205ENST00000548130 EPCAMP16422 314 aa9.63□□□□□ -0.87
SMARCC2-205ENST00000548130 KLRC2P26717 231 aa9.63□□□□□ -0.87
SMARCC2-205ENST00000548130 TKTP29401 623 aaKnown RBP9.63□□□□□ -0.87
SMARCC2-205ENST00000548130 MCM4P33991 863 aa9.63□□□□□ -0.87
SMARCC2-205ENST00000548130 TFAMQ00059 246 aaKnown RBP9.63□□□□□ -0.87
SMARCC2-205ENST00000548130 POU5F1Q01860 360 aaKnown RBP9.63□□□□□ -0.87
SMARCC2-205ENST00000548130 ELAVL2Q12926 359 aaKnown RBP9.63□□□□□ -0.87
SMARCC2-205ENST00000548130 LMBRD2Q68DH5 695 aaPredicted RBP9.63□□□□□ -0.87
SMARCC2-205ENST00000548130 ISM2Q6H9L7 571 aa9.63□□□□□ -0.87
SMARCC2-205ENST00000548130 GLYCTKQ8IVS8 523 aa9.63□□□□□ -0.87
SMARCC2-205ENST00000548130 XXYLT1Q8NBI6 393 aa9.63□□□□□ -0.87
SMARCC2-205ENST00000548130 SMARCE1Q969G3 411 aa9.63□□□□□ -0.87
SMARCC2-205ENST00000548130 ASB2Q96Q27 587 aa9.63□□□□□ -0.87
SMARCC2-205ENST00000548130 TSPAN18Q96SJ8 248 aa9.63□□□□□ -0.87
SMARCC2-205ENST00000548130 APOL5Q9BWW9 433 aa9.63□□□□□ -0.87
SMARCC2-205ENST00000548130 KCTD10Q9H3F6 313 aa9.63□□□□□ -0.87
SMARCC2-205ENST00000548130 RXFP1Q9HBX9 757 aa9.63□□□□□ -0.87
SMARCC2-205ENST00000548130 PDE11AQ9HCR9 933 aa9.63□□□□□ -0.87
SMARCC2-205ENST00000548130 WDR70Q9NW82 654 aa9.63□□□□□ -0.87
SMARCC2-205ENST00000548130 CLEC1BQ9P126 229 aa9.63□□□□□ -0.87
SMARCC2-205ENST00000548130 HOOK1Q9UJC3 728 aaKnown RBP9.63□□□□□ -0.87
SMARCC2-205ENST00000548130 SSX2IPQ9Y2D8 614 aa9.63□□□□□ -0.87
SMARCC2-205ENST00000548130 DERAQ9Y315 318 aa9.63□□□□□ -0.87
SMARCC2-205ENST00000548130 HCFC2Q9Y5Z7 792 aa9.63□□□□□ -0.87
SMARCC2-205ENST00000548130 TDRD15B5MCY1 1934 aaKnown RBP9.62□□□□□ -0.87
SMARCC2-205ENST00000548130 DPYSL4O14531 572 aa9.62□□□□□ -0.87
SMARCC2-205ENST00000548130 EXOC3O60645 756 aa9.62□□□□□ -0.87
SMARCC2-205ENST00000548130 FGFR3P22607 806 aa9.62□□□□□ -0.87
SMARCC2-205ENST00000548130 SNRPFP62306 86 aaKnown RBP9.62□□□□□ -0.87
SMARCC2-205ENST00000548130 KCNC3Q14003 757 aa9.62□□□□□ -0.87
SMARCC2-205ENST00000548130 SNRNP35Q16560 246 aaKnown RBP9.62□□□□□ -0.87
SMARCC2-205ENST00000548130 AAK1Q2M2I8 961 aa9.62□□□□□ -0.87
SMARCC2-205ENST00000548130 LEXMQ3ZCV2 418 aa9.62□□□□□ -0.87
SMARCC2-205ENST00000548130 C9orf57Q5W0N0 161 aa9.62□□□□□ -0.87
SMARCC2-205ENST00000548130 SCARA3Q6AZY7 606 aa9.62□□□□□ -0.87
SMARCC2-205ENST00000548130 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.62□□□□□ -0.87
SMARCC2-205ENST00000548130 C12orf56Q8IXR9 622 aa9.62□□□□□ -0.87
SMARCC2-205ENST00000548130 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.62□□□□□ -0.87
SMARCC2-205ENST00000548130 GOLGA5Q8TBA6 731 aa9.62□□□□□ -0.87
SMARCC2-205ENST00000548130 LNX1Q8TBB1 728 aaPredicted RBP9.62□□□□□ -0.87
SMARCC2-205ENST00000548130 SLC22A17Q8WUG5 538 aa9.62□□□□□ -0.87
SMARCC2-205ENST00000548130 PIK3R5Q8WYR1 880 aa9.62□□□□□ -0.87
SMARCC2-205ENST00000548130 FBXL18Q96ME1 805 aa9.62□□□□□ -0.87
SMARCC2-205ENST00000548130 RMND1Q9NWS8 449 aa9.62□□□□□ -0.87
SMARCC2-205ENST00000548130 DPP3Q9NY33 737 aa9.62□□□□□ -0.87
SMARCC2-205ENST00000548130 CGNQ9P2M7 1197 aaKnown RBP9.62□□□□□ -0.87
SMARCC2-205ENST00000548130 CD207Q9UJ71 328 aa9.62□□□□□ -0.87
SMARCC2-205ENST00000548130 MAN1B1Q9UKM7 699 aa9.62□□□□□ -0.87
SMARCC2-205ENST00000548130 C2CD2Q9Y426 696 aa9.62□□□□□ -0.87
SMARCC2-205ENST00000548130 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.62□□□□□ -0.87
SMARCC2-205ENST00000548130 TRIP11Q15643 1979 aa9.62□□□□□ -0.87
SMARCC2-205ENST00000548130 ATG2AQ2TAZ0 1938 aa9.62□□□□□ -0.87
SMARCC2-205ENST00000548130 BIN1O00499 593 aa9.61□□□□□ -0.87
SMARCC2-205ENST00000548130 PIRO00625 290 aa9.61□□□□□ -0.87
SMARCC2-205ENST00000548130 PDXKO00764 312 aa9.61□□□□□ -0.87
SMARCC2-205ENST00000548130 SPTLC1O15269 473 aa9.61□□□□□ -0.87
SMARCC2-205ENST00000548130 ADAM12O43184 909 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms