RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 SMC1AQ14683 1233 aaKnown RBP8.47□□□□□ -1.05
SNHG1-223ENST00000545440 SMAD2Q15796 467 aaKnown RBP8.47□□□□□ -1.05
SNHG1-223ENST00000545440 DUSP6Q16828 381 aa8.47□□□□□ -1.05
SNHG1-223ENST00000545440 KRT79Q5XKE5 535 aa8.47□□□□□ -1.05
SNHG1-223ENST00000545440 ARL6IP4Q66PJ3 421 aaKnown RBP8.47□□□□□ -1.05
SNHG1-223ENST00000545440 SLC27A1Q6PCB7 646 aa8.47□□□□□ -1.05
SNHG1-223ENST00000545440 DTHD1Q6ZMT9 781 aa8.47□□□□□ -1.05
SNHG1-223ENST00000545440 EP400NLQ6ZTU2 488 aa8.47□□□□□ -1.05
SNHG1-223ENST00000545440 BRAPQ7Z569 592 aa8.47□□□□□ -1.05
SNHG1-223ENST00000545440 FAM178BQ8IXR5 827 aa8.47□□□□□ -1.05
SNHG1-223ENST00000545440 SMRP1Q8NCR6 262 aa8.47□□□□□ -1.05
SNHG1-223ENST00000545440 SMG8Q8ND04 991 aaKnown RBP8.47□□□□□ -1.05
SNHG1-223ENST00000545440 MICAL1Q8TDZ2 1067 aa8.47□□□□□ -1.05
SNHG1-223ENST00000545440 KIFAP3Q92845 792 aa8.47□□□□□ -1.05
SNHG1-223ENST00000545440 CPB2Q96IY4 423 aa8.47□□□□□ -1.05
SNHG1-223ENST00000545440 MSLNLQ96KJ4 702 aa8.47□□□□□ -1.05
SNHG1-223ENST00000545440 TMEM175Q9BSA9 504 aa8.47□□□□□ -1.05
SNHG1-223ENST00000545440 EIF2AQ9BY44 585 aaKnown RBP8.47□□□□□ -1.05
SNHG1-223ENST00000545440 TRIM6Q9C030 488 aaPredicted RBP8.47□□□□□ -1.05
SNHG1-223ENST00000545440 CSRNP2Q9H175 543 aa8.47□□□□□ -1.05
SNHG1-223ENST00000545440 NRDE2Q9H7Z3 1164 aa8.47□□□□□ -1.05
SNHG1-223ENST00000545440 TLE6Q9H808 572 aa8.47□□□□□ -1.05
SNHG1-223ENST00000545440 DDX19AQ9NUU7 478 aaKnown RBP8.47□□□□□ -1.05
SNHG1-223ENST00000545440 PRMT7Q9NVM4 692 aaPredicted RBP8.47□□□□□ -1.05
SNHG1-223ENST00000545440 NXF1Q9UBU9 619 aaKnown RBP8.47□□□□□ -1.05
SNHG1-223ENST00000545440 STK39Q9UEW8 545 aa8.47□□□□□ -1.05
SNHG1-223ENST00000545440 CD207Q9UJ71 328 aa8.47□□□□□ -1.05
SNHG1-223ENST00000545440 INPP5FQ9Y2H2 1132 aa8.47□□□□□ -1.05
SNHG1-223ENST00000545440 PCDHGC5Q9Y5F6 944 aa8.47□□□□□ -1.05
SNHG1-223ENST00000545440 DOCK6Q96HP0 2047 aa8.46□□□□□ -1.05
SNHG1-223ENST00000545440 A0A1B0GUA9 196 aa8.46□□□□□ -1.06
SNHG1-223ENST00000545440 PP2D1A8MPX8 630 aa8.46□□□□□ -1.06
SNHG1-223ENST00000545440 EIF1AYO14602 144 aaKnown RBP8.46□□□□□ -1.06
SNHG1-223ENST00000545440 B4GALT5O43286 388 aa8.46□□□□□ -1.06
SNHG1-223ENST00000545440 MBTPS2O43462 519 aa8.46□□□□□ -1.06
SNHG1-223ENST00000545440 SLC26A4O43511 780 aa8.46□□□□□ -1.06
SNHG1-223ENST00000545440 B4GALT3O60512 393 aa8.46□□□□□ -1.06
SNHG1-223ENST00000545440 SASH3O75995 380 aa8.46□□□□□ -1.06
SNHG1-223ENST00000545440 EYA4O95677 639 aa8.46□□□□□ -1.06
SNHG1-223ENST00000545440 BMP15O95972 392 aa8.46□□□□□ -1.06
SNHG1-223ENST00000545440 GALTP07902 379 aa8.46□□□□□ -1.06
SNHG1-223ENST00000545440 ITGA4P13612 1032 aa8.46□□□□□ -1.06
SNHG1-223ENST00000545440 ZNF16P17020 682 aaPredicted RBP8.46□□□□□ -1.06
SNHG1-223ENST00000545440 CD33P20138 364 aa8.46□□□□□ -1.06
SNHG1-223ENST00000545440 PDCP20941 246 aa8.46□□□□□ -1.06
SNHG1-223ENST00000545440 MLH1P40692 756 aa8.46□□□□□ -1.06
SNHG1-223ENST00000545440 KCNC3Q14003 757 aa8.46□□□□□ -1.06
SNHG1-223ENST00000545440 GIT2Q14161 759 aa8.46□□□□□ -1.06
SNHG1-223ENST00000545440 BMS1Q14692 1282 aaKnown RBP8.46□□□□□ -1.06
SNHG1-223ENST00000545440 ENOX2Q16206 610 aaKnown RBP8.46□□□□□ -1.06
SNHG1-223ENST00000545440 IL17AQ16552 155 aa8.46□□□□□ -1.06
SNHG1-223ENST00000545440 MAPK6Q16659 721 aa8.46□□□□□ -1.06
SNHG1-223ENST00000545440 LONRF3Q496Y0 759 aa8.46□□□□□ -1.06
SNHG1-223ENST00000545440 HYIQ5T013 277 aa8.46□□□□□ -1.06
SNHG1-223ENST00000545440 PLPP4Q5VZY2 271 aa8.46□□□□□ -1.06
SNHG1-223ENST00000545440 LARP1BQ659C4 914 aaKnown RBP8.46□□□□□ -1.06
SNHG1-223ENST00000545440 TMEM184AQ6ZMB5 413 aa8.46□□□□□ -1.06
SNHG1-223ENST00000545440 MAEAQ7L5Y9 396 aa8.46□□□□□ -1.06
SNHG1-223ENST00000545440 DDX53Q86TM3 631 aaKnown RBP8.46□□□□□ -1.06
SNHG1-223ENST00000545440 TMEM173Q86WV6 379 aaPredicted RBP8.46□□□□□ -1.06
SNHG1-223ENST00000545440 NANOS1Q8WY41 292 aaKnown RBP8.46□□□□□ -1.06
SNHG1-223ENST00000545440 BSNDQ8WZ55 320 aa8.46□□□□□ -1.06
SNHG1-223ENST00000545440 BHMTQ93088 406 aa8.46□□□□□ -1.06
SNHG1-223ENST00000545440 IGSF21Q96ID5 467 aa8.46□□□□□ -1.06
SNHG1-223ENST00000545440 SPACA7Q96KW9 195 aa8.46□□□□□ -1.06
SNHG1-223ENST00000545440 AK8Q96MA6 479 aa8.46□□□□□ -1.06
SNHG1-223ENST00000545440 POP1Q99575 1024 aaKnown RBP8.46□□□□□ -1.06
SNHG1-223ENST00000545440 MMTAG2Q9BU76 263 aaKnown RBP8.46□□□□□ -1.06
SNHG1-223ENST00000545440 CCDC113Q9H0I3 377 aa8.46□□□□□ -1.06
SNHG1-223ENST00000545440 NT5C3AQ9H0P0 336 aa8.46□□□□□ -1.06
SNHG1-223ENST00000545440 ZBP1Q9H171 429 aa8.46□□□□□ -1.06
SNHG1-223ENST00000545440 RBSNQ9H1K0 784 aa8.46□□□□□ -1.06
SNHG1-223ENST00000545440 FZD8Q9H461 694 aa8.46□□□□□ -1.06
SNHG1-223ENST00000545440 NXF3Q9H4D5 531 aaKnown RBP8.46□□□□□ -1.06
SNHG1-223ENST00000545440 IGFLR1Q9H665 355 aa8.46□□□□□ -1.06
SNHG1-223ENST00000545440 CLEC1BQ9P126 229 aa8.46□□□□□ -1.06
SNHG1-223ENST00000545440 DNAJB4Q9UDY4 337 aa8.46□□□□□ -1.06
SNHG1-223ENST00000545440 GIT1Q9Y2X7 761 aa8.46□□□□□ -1.06
SNHG1-223ENST00000545440 IRAK3Q9Y616 596 aa8.46□□□□□ -1.06
SNHG1-223ENST00000545440 PHLPP2Q6ZVD8 1323 aa8.46□□□□□ -1.06
SNHG1-223ENST00000545440 TSC2P49815 1807 aa8.45□□□□□ -1.06
SNHG1-223ENST00000545440 KMT2EQ8IZD2 1858 aa8.45□□□□□ -1.06
SNHG1-223ENST00000545440 ZNF318Q5VUA4 2279 aa8.45□□□□□ -1.06
SNHG1-223ENST00000545440 VWA3AA6NCI4 1184 aa8.45□□□□□ -1.06
SNHG1-223ENST00000545440 C2orf71A6NGG8 1288 aa8.45□□□□□ -1.06
SNHG1-223ENST00000545440 ARL5CA6NH57 179 aa8.45□□□□□ -1.06
SNHG1-223ENST00000545440 A6NHS1 94 aa8.45□□□□□ -1.06
SNHG1-223ENST00000545440 HIDE1A8MVS5 230 aa8.45□□□□□ -1.06
SNHG1-223ENST00000545440 NT5C1B-RDH14C9J2C7 533 aa8.45□□□□□ -1.06
SNHG1-223ENST00000545440 ACKR2O00590 384 aa8.45□□□□□ -1.06
SNHG1-223ENST00000545440 N4BP3O15049 544 aa8.45□□□□□ -1.06
SNHG1-223ENST00000545440 PRKCBP05771 671 aa8.45□□□□□ -1.06
SNHG1-223ENST00000545440 CTSAP10619 480 aa8.45□□□□□ -1.06
SNHG1-223ENST00000545440 SLC11A1P49279 550 aa8.45□□□□□ -1.06
SNHG1-223ENST00000545440 EFNA5P52803 228 aa8.45□□□□□ -1.06
SNHG1-223ENST00000545440 ZP2Q05996 745 aa8.45□□□□□ -1.06
SNHG1-223ENST00000545440 DSC1Q08554 894 aa8.45□□□□□ -1.06
SNHG1-223ENST00000545440 GRIK3Q13003 919 aa8.45□□□□□ -1.06
SNHG1-223ENST00000545440 DMP1Q13316 513 aaPredicted RBP8.45□□□□□ -1.06
SNHG1-223ENST00000545440 PRPF4BQ13523 1007 aaKnown RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms