RNA–Protein interactions for RNA: ENST00000544506.1

LEMD3-205, Transcript of LEM domain containing 3, human

TSL 5

Gene LEMD3, Length 412 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LEMD3-205	ENST00000544506	OBP2A	Q9NY56	170 aa		6.7	□□□□□ -1.34
LEMD3-205	ENST00000544506	SLC45A2	Q9UMX9	530 aa		6.7	□□□□□ -1.34
LEMD3-205	ENST00000544506		A6NNZ2	444 aa		6.69	□□□□□ -1.34
LEMD3-205	ENST00000544506	GNAI3	P08754	354 aa		6.69	□□□□□ -1.34
LEMD3-205	ENST00000544506	SPATA31D3	P0C874	917 aa		6.69	□□□□□ -1.34
LEMD3-205	ENST00000544506	GNAI1	P63096	354 aa		6.69	□□□□□ -1.34
LEMD3-205	ENST00000544506	FAM189B	P81408	668 aa		6.69	□□□□□ -1.34
LEMD3-205	ENST00000544506	SLFN5	Q08AF3	891 aa		6.69	□□□□□ -1.34
LEMD3-205	ENST00000544506	FOXE3	Q13461	319 aa		6.69	□□□□□ -1.34
LEMD3-205	ENST00000544506	GRM3	Q14832	879 aa		6.69	□□□□□ -1.34
LEMD3-205	ENST00000544506	SPATA31D4	Q6ZUB0	917 aa		6.69	□□□□□ -1.34
LEMD3-205	ENST00000544506	DAAM2	Q86T65	1068 aa		6.69	□□□□□ -1.34
LEMD3-205	ENST00000544506	PPP1R3B	Q86XI6	285 aa		6.69	□□□□□ -1.34
LEMD3-205	ENST00000544506	ZNF503	Q96F45	646 aa		6.69	□□□□□ -1.34
LEMD3-205	ENST00000544506	SLC46A2	Q9BY10	475 aa		6.69	□□□□□ -1.34
LEMD3-205	ENST00000544506	B3GNT5	Q9BYG0	378 aa		6.69	□□□□□ -1.34
LEMD3-205	ENST00000544506	MRPL46	Q9H2W6	279 aa	Known RBP	6.69	□□□□□ -1.34
LEMD3-205	ENST00000544506	SLAMF7	Q9NQ25	335 aa		6.69	□□□□□ -1.34
LEMD3-205	ENST00000544506	GNL3L	Q9NVN8	582 aa	Known RBP	6.69	□□□□□ -1.34
LEMD3-205	ENST00000544506	ATP11B	Q9Y2G3	1177 aa		6.69	□□□□□ -1.34
LEMD3-205	ENST00000544506	PCDHA1	Q9Y5I3	950 aa		6.69	□□□□□ -1.34
LEMD3-205	ENST00000544506	CCDC78	A2IDD5	438 aa		6.68	□□□□□ -1.34
LEMD3-205	ENST00000544506	MATN4	O95460	622 aa		6.68	□□□□□ -1.34
LEMD3-205	ENST00000544506	AHSG	P02765	367 aa		6.68	□□□□□ -1.34
LEMD3-205	ENST00000544506	CKB	P12277	381 aa		6.68	□□□□□ -1.34
LEMD3-205	ENST00000544506	FCER1A	P12319	257 aa		6.68	□□□□□ -1.34
LEMD3-205	ENST00000544506	INSRR	P14616	1297 aa		6.68	□□□□□ -1.34
LEMD3-205	ENST00000544506	NR4A1	P22736	598 aa		6.68	□□□□□ -1.34
LEMD3-205	ENST00000544506	MIIP	Q5JXC2	388 aa		6.68	□□□□□ -1.34
LEMD3-205	ENST00000544506	NPNT	Q6UXI9	565 aa		6.68	□□□□□ -1.34
LEMD3-205	ENST00000544506	ZNF276	Q8N554	614 aa		6.68	□□□□□ -1.34
LEMD3-205	ENST00000544506	TMIE	Q8NEW7	156 aa		6.68	□□□□□ -1.34
LEMD3-205	ENST00000544506	BRIX1	Q8TDN6	353 aa	Known RBP	6.68	□□□□□ -1.34
LEMD3-205	ENST00000544506	NUP133	Q8WUM0	1156 aa		6.68	□□□□□ -1.34
LEMD3-205	ENST00000544506	TNPO1	Q92973	898 aa	Known RBP	6.68	□□□□□ -1.34
LEMD3-205	ENST00000544506	MTFMT	Q96DP5	389 aa	Known RBP	6.68	□□□□□ -1.34
LEMD3-205	ENST00000544506	C8orf48	Q96LL4	319 aa		6.68	□□□□□ -1.34
LEMD3-205	ENST00000544506	ZSWIM1	Q9BR11	485 aa		6.68	□□□□□ -1.34
LEMD3-205	ENST00000544506	TLR10	Q9BXR5	811 aa		6.68	□□□□□ -1.34
LEMD3-205	ENST00000544506	BRD9	Q9H8M2	597 aa		6.68	□□□□□ -1.34
LEMD3-205	ENST00000544506	STAP2	Q9UGK3	403 aa		6.68	□□□□□ -1.34
LEMD3-205	ENST00000544506		A0A088AWK7	358 aa		6.67	□□□□□ -1.34
LEMD3-205	ENST00000544506		A0A1B0GTW7	788 aa		6.67	□□□□□ -1.34
LEMD3-205	ENST00000544506	PRSS29P	A6NIE9	313 aa		6.67	□□□□□ -1.34
LEMD3-205	ENST00000544506	FAM227A	F5H4B4	570 aa		6.67	□□□□□ -1.34
LEMD3-205	ENST00000544506	MATN3	O15232	486 aa		6.67	□□□□□ -1.34
LEMD3-205	ENST00000544506	NCR1	O76036	304 aa		6.67	□□□□□ -1.34
LEMD3-205	ENST00000544506	FGFR4	P22455	802 aa		6.67	□□□□□ -1.34
LEMD3-205	ENST00000544506	ZFP36	P26651	326 aa	Known RBP	6.67	□□□□□ -1.34
LEMD3-205	ENST00000544506	PHKA1	P46020	1223 aa		6.67	□□□□□ -1.34
LEMD3-205	ENST00000544506	AGFG1	P52594	562 aa	Known RBP	6.67	□□□□□ -1.34
LEMD3-205	ENST00000544506	GBX1	Q14549	363 aa		6.67	□□□□□ -1.34
LEMD3-205	ENST00000544506	ANO6	Q4KMQ2	910 aa		6.67	□□□□□ -1.34
LEMD3-205	ENST00000544506	LRRC55	Q6ZSA7	311 aa		6.67	□□□□□ -1.34
LEMD3-205	ENST00000544506	COL23A1	Q86Y22	540 aa	Predicted RBP	6.67	□□□□□ -1.34
LEMD3-205	ENST00000544506	AOPEP	Q8N6M6	819 aa		6.67	□□□□□ -1.34
LEMD3-205	ENST00000544506	CELF5	Q8N6W0	485 aa	Known RBP	6.67	□□□□□ -1.34
LEMD3-205	ENST00000544506	SLC25A43	Q8WUT9	341 aa	Predicted RBP	6.67	□□□□□ -1.34
LEMD3-205	ENST00000544506	MARS2	Q96GW9	593 aa	Known RBP	6.67	□□□□□ -1.34
LEMD3-205	ENST00000544506	KLHL32	Q96NJ5	620 aa		6.67	□□□□□ -1.34
LEMD3-205	ENST00000544506	NT5C1B	Q96P26	610 aa		6.67	□□□□□ -1.34
LEMD3-205	ENST00000544506	TMEM60	Q9H2L4	133 aa		6.67	□□□□□ -1.34
LEMD3-205	ENST00000544506	RNPEP	Q9H4A4	650 aa		6.67	□□□□□ -1.34
LEMD3-205	ENST00000544506	PRDM11	Q9NQV5	511 aa		6.67	□□□□□ -1.34
LEMD3-205	ENST00000544506	RLIM	Q9NVW2	624 aa		6.67	□□□□□ -1.34
LEMD3-205	ENST00000544506	CFAP97	Q9P2B7	532 aa		6.67	□□□□□ -1.34
LEMD3-205	ENST00000544506	USP25	Q9UHP3	1055 aa		6.67	□□□□□ -1.34
LEMD3-205	ENST00000544506	MYRF	Q9Y2G1	1151 aa		6.67	□□□□□ -1.34
LEMD3-205	ENST00000544506	AATK	Q6ZMQ8	1374 aa		6.67	□□□□□ -1.34
LEMD3-205	ENST00000544506	RNASET2	O00584	256 aa	Known RBP	6.66	□□□□□ -1.34
LEMD3-205	ENST00000544506	GJB1	P08034	283 aa		6.66	□□□□□ -1.34
LEMD3-205	ENST00000544506	ELANE	P08246	267 aa		6.66	□□□□□ -1.34
LEMD3-205	ENST00000544506	PSMC1	P62191	440 aa	Known RBP	6.66	□□□□□ -1.34
LEMD3-205	ENST00000544506	OCA2	Q04671	838 aa		6.66	□□□□□ -1.34
LEMD3-205	ENST00000544506	TUBA3C	Q13748	450 aa		6.66	□□□□□ -1.34
LEMD3-205	ENST00000544506	FGL2	Q14314	439 aa		6.66	□□□□□ -1.34
LEMD3-205	ENST00000544506	KIF22	Q14807	665 aa		6.66	□□□□□ -1.34
LEMD3-205	ENST00000544506	LLGL1	Q15334	1064 aa		6.66	□□□□□ -1.34
LEMD3-205	ENST00000544506	HSP90AB2P	Q58FF8	381 aa		6.66	□□□□□ -1.34
LEMD3-205	ENST00000544506	LCE1D	Q5T752	114 aa		6.66	□□□□□ -1.34
LEMD3-205	ENST00000544506	TUBA3E	Q6PEY2	450 aa		6.66	□□□□□ -1.34
LEMD3-205	ENST00000544506	PDSS2	Q86YH6	399 aa		6.66	□□□□□ -1.34
LEMD3-205	ENST00000544506	MAPKAPK5	Q8IW41	473 aa		6.66	□□□□□ -1.34
LEMD3-205	ENST00000544506	VPS11	Q9H270	941 aa		6.66	□□□□□ -1.34
LEMD3-205	ENST00000544506	AKIP1	Q9NQ31	210 aa		6.66	□□□□□ -1.34
LEMD3-205	ENST00000544506	HSFX1	Q9UBD0	423 aa		6.66	□□□□□ -1.34
LEMD3-205	ENST00000544506	ZDHHC8	Q9ULC8	765 aa		6.66	□□□□□ -1.34
LEMD3-205	ENST00000544506	PCDHA6	Q9UN73	950 aa		6.66	□□□□□ -1.34
LEMD3-205	ENST00000544506	CDYL	Q9Y232	598 aa		6.66	□□□□□ -1.34
LEMD3-205	ENST00000544506	FPGT-TNNI3K	V9GXZ4	949 aa		6.66	□□□□□ -1.34
LEMD3-205	ENST00000544506	FRMPD2	Q68DX3	1309 aa	Predicted RBP	6.66	□□□□□ -1.34
LEMD3-205	ENST00000544506	GAGE12B	A1L429	117 aa		6.65	□□□□□ -1.34
LEMD3-205	ENST00000544506	GAGE12H	A6NDE8	117 aa		6.65	□□□□□ -1.34
LEMD3-205	ENST00000544506	MARCH11	A6NNE9	402 aa		6.65	□□□□□ -1.34
LEMD3-205	ENST00000544506	ZNF785	A8K8V0	405 aa		6.65	□□□□□ -1.34
LEMD3-205	ENST00000544506	PEX11B	O96011	259 aa		6.65	□□□□□ -1.34
LEMD3-205	ENST00000544506	ANXA1	P04083	346 aa		6.65	□□□□□ -1.34
LEMD3-205	ENST00000544506	RARB	P10826	455 aa		6.65	□□□□□ -1.34
LEMD3-205	ENST00000544506	HSD11B2	P80365	405 aa		6.65	□□□□□ -1.34
LEMD3-205	ENST00000544506	EXOSC9	Q06265	439 aa	Known RBP	6.65	□□□□□ -1.34

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