RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 PPLO60437 1756 aa6.69□□□□□ -1.34
XRCC4-206ENST00000542685 CDC42BPGQ6DT37 1551 aa6.69□□□□□ -1.34
XRCC4-206ENST00000542685 ZNF518AQ6AHZ1 1483 aa6.68□□□□□ -1.34
XRCC4-206ENST00000542685 EFCAB6Q5THR3 1501 aa6.68□□□□□ -1.34
XRCC4-206ENST00000542685 A0A087X0B3 334 aa6.68□□□□□ -1.34
XRCC4-206ENST00000542685 COQ9O75208 318 aa6.68□□□□□ -1.34
XRCC4-206ENST00000542685 RPS6KA5O75582 802 aa6.68□□□□□ -1.34
XRCC4-206ENST00000542685 TUBB4AP04350 444 aa6.68□□□□□ -1.34
XRCC4-206ENST00000542685 PTGS2P35354 604 aa6.68□□□□□ -1.34
XRCC4-206ENST00000542685 DUSP2Q05923 314 aa6.68□□□□□ -1.34
XRCC4-206ENST00000542685 ATP13A4Q4VNC1 1196 aa6.68□□□□□ -1.34
XRCC4-206ENST00000542685 CCDC178Q5BJE1 867 aa6.68□□□□□ -1.34
XRCC4-206ENST00000542685 DCAF17Q5H9S7 520 aaPredicted RBP6.68□□□□□ -1.34
XRCC4-206ENST00000542685 WDR63Q8IWG1 891 aa6.68□□□□□ -1.34
XRCC4-206ENST00000542685 FBXO18Q8NFZ0 1043 aa6.68□□□□□ -1.34
XRCC4-206ENST00000542685 KIAA1524Q8TCG1 905 aa6.68□□□□□ -1.34
XRCC4-206ENST00000542685 CPT1CQ8TCG5 803 aa6.68□□□□□ -1.34
XRCC4-206ENST00000542685 HAS1Q92839 578 aa6.68□□□□□ -1.34
XRCC4-206ENST00000542685 IL17RAQ96F46 866 aa6.68□□□□□ -1.34
XRCC4-206ENST00000542685 TMX4Q9H1E5 349 aaPredicted RBP6.68□□□□□ -1.34
XRCC4-206ENST00000542685 TSPY26PQ9H489 355 aa6.68□□□□□ -1.34
XRCC4-206ENST00000542685 SUDS3Q9H7L9 328 aaPredicted RBP6.68□□□□□ -1.34
XRCC4-206ENST00000542685 EVLQ9UI08 416 aaPredicted RBP6.68□□□□□ -1.34
XRCC4-206ENST00000542685 PRSS50Q9UI38 385 aa6.68□□□□□ -1.34
XRCC4-206ENST00000542685 ANAPC4Q9UJX5 808 aa6.68□□□□□ -1.34
XRCC4-206ENST00000542685 FRMPD1Q5SYB0 1578 aa6.68□□□□□ -1.34
XRCC4-206ENST00000542685 ABCA9Q8IUA7 1624 aa6.68□□□□□ -1.34
XRCC4-206ENST00000542685 MED14O60244 1454 aa6.67□□□□□ -1.34
XRCC4-206ENST00000542685 A0A1W2PR48 441 aa6.67□□□□□ -1.34
XRCC4-206ENST00000542685 ERICH4A6NGS2 130 aa6.67□□□□□ -1.34
XRCC4-206ENST00000542685 GRXCR1A8MXD5 290 aa6.67□□□□□ -1.34
XRCC4-206ENST00000542685 DNAJC6O75061 913 aa6.67□□□□□ -1.34
XRCC4-206ENST00000542685 TPM1P09493 284 aa6.67□□□□□ -1.34
XRCC4-206ENST00000542685 ICA1Q05084 483 aa6.67□□□□□ -1.34
XRCC4-206ENST00000542685 TRIM25Q14258 630 aaKnown RBP6.67□□□□□ -1.34
XRCC4-206ENST00000542685 UBE3CQ15386 1083 aa6.67□□□□□ -1.34
XRCC4-206ENST00000542685 HSP90AB4PQ58FF6 505 aa6.67□□□□□ -1.34
XRCC4-206ENST00000542685 CCDC30Q5VVM6 783 aa6.67□□□□□ -1.34
XRCC4-206ENST00000542685 NAIF1Q69YI7 327 aaPredicted RBP6.67□□□□□ -1.34
XRCC4-206ENST00000542685 MRGPRGQ86SM5 289 aa6.67□□□□□ -1.34
XRCC4-206ENST00000542685 LYSMD2Q8IV50 215 aa6.67□□□□□ -1.34
XRCC4-206ENST00000542685 GLB1L2Q8IW92 636 aa6.67□□□□□ -1.34
XRCC4-206ENST00000542685 EFCAB13Q8IY85 973 aa6.67□□□□□ -1.34
XRCC4-206ENST00000542685 ULK2Q8IYT8 1036 aa6.67□□□□□ -1.34
XRCC4-206ENST00000542685 ERO1AQ96HE7 468 aa6.67□□□□□ -1.34
XRCC4-206ENST00000542685 FAM193BQ96PV7 902 aaPredicted RBP6.67□□□□□ -1.34
XRCC4-206ENST00000542685 TTPALQ9BTX7 342 aa6.67□□□□□ -1.34
XRCC4-206ENST00000542685 PRDM12Q9H4Q4 367 aa6.67□□□□□ -1.34
XRCC4-206ENST00000542685 RRP15Q9Y3B9 282 aaKnown RBP6.67□□□□□ -1.34
XRCC4-206ENST00000542685 ELP1O95163 1332 aa6.67□□□□□ -1.34
XRCC4-206ENST00000542685 MROH2AA6NES4 1674 aa6.67□□□□□ -1.34
XRCC4-206ENST00000542685 CLTCQ00610 1675 aaKnown RBP6.67□□□□□ -1.34
XRCC4-206ENST00000542685 ABCC11Q96J66 1382 aa6.67□□□□□ -1.34
XRCC4-206ENST00000542685 PLCH2O75038 1416 aa6.67□□□□□ -1.34
XRCC4-206ENST00000542685 RAMP2O60895 175 aa6.66□□□□□ -1.34
XRCC4-206ENST00000542685 SCAF4O95104 1147 aaKnown RBP6.66□□□□□ -1.34
XRCC4-206ENST00000542685 IGHDP01880 384 aa6.66□□□□□ -1.34
XRCC4-206ENST00000542685 LPLP06858 475 aa6.66□□□□□ -1.34
XRCC4-206ENST00000542685 GZMKP49863 264 aa6.66□□□□□ -1.34
XRCC4-206ENST00000542685 MRPL49Q13405 166 aaKnown RBP6.66□□□□□ -1.34
XRCC4-206ENST00000542685 PDCD2Q16342 344 aaPredicted RBP6.66□□□□□ -1.34
XRCC4-206ENST00000542685 ZSCAN26Q16670 478 aa6.66□□□□□ -1.34
XRCC4-206ENST00000542685 MAP9Q49MG5 647 aa6.66□□□□□ -1.34
XRCC4-206ENST00000542685 TTLL5Q6EMB2 1281 aa6.66□□□□□ -1.34
XRCC4-206ENST00000542685 SYT10Q6XYQ8 523 aa6.66□□□□□ -1.34
XRCC4-206ENST00000542685 MRGPREQ86SM8 312 aa6.66□□□□□ -1.34
XRCC4-206ENST00000542685 FAM83AQ86UY5 434 aa6.66□□□□□ -1.34
XRCC4-206ENST00000542685 XYLT1Q86Y38 959 aa6.66□□□□□ -1.34
XRCC4-206ENST00000542685 CCDC112Q8NEF3 446 aa6.66□□□□□ -1.34
XRCC4-206ENST00000542685 OR14C36Q8NHC7 312 aa6.66□□□□□ -1.34
XRCC4-206ENST00000542685 USP7Q93009 1102 aa6.66□□□□□ -1.34
XRCC4-206ENST00000542685 EXOC4Q96A65 974 aa6.66□□□□□ -1.34
XRCC4-206ENST00000542685 CPEB1Q9BZB8 566 aaKnown RBP6.66□□□□□ -1.34
XRCC4-206ENST00000542685 WNT8AQ9H1J5 351 aa6.66□□□□□ -1.34
XRCC4-206ENST00000542685 LMBRD1Q9NUN5 540 aa6.66□□□□□ -1.34
XRCC4-206ENST00000542685 ARGLU1Q9NWB6 273 aaPredicted RBP6.66□□□□□ -1.34
XRCC4-206ENST00000542685 ZNF446Q9NWS9 450 aa6.66□□□□□ -1.34
XRCC4-206ENST00000542685 EIF2B4Q9UI10 523 aaKnown RBP6.66□□□□□ -1.34
XRCC4-206ENST00000542685 ARHGEF28Q8N1W1 1705 aaKnown RBP6.65□□□□□ -1.34
XRCC4-206ENST00000542685 CCP110O43303 1012 aa6.65□□□□□ -1.34
XRCC4-206ENST00000542685 PRAMEF4O60810 478 aa6.65□□□□□ -1.34
XRCC4-206ENST00000542685 RECQL4O94761 1208 aa6.65□□□□□ -1.34
XRCC4-206ENST00000542685 SMC2O95347 1197 aa6.65□□□□□ -1.34
XRCC4-206ENST00000542685 KRT4P19013 534 aa6.65□□□□□ -1.34
XRCC4-206ENST00000542685 NR4A1P22736 598 aa6.65□□□□□ -1.34
XRCC4-206ENST00000542685 PTTG1IPP53801 180 aa6.65□□□□□ -1.34
XRCC4-206ENST00000542685 WNT3AP56704 352 aa6.65□□□□□ -1.34
XRCC4-206ENST00000542685 INHBEP58166 350 aa6.65□□□□□ -1.34
XRCC4-206ENST00000542685 FSTL1Q12841 308 aa6.65□□□□□ -1.34
XRCC4-206ENST00000542685 TRAF1Q13077 416 aa6.65□□□□□ -1.34
XRCC4-206ENST00000542685 SMN1Q16637 294 aaKnown RBP6.65□□□□□ -1.34
XRCC4-206ENST00000542685 CCDC96Q2M329 555 aa6.65□□□□□ -1.34
XRCC4-206ENST00000542685 CT83Q5H943 113 aa6.65□□□□□ -1.34
XRCC4-206ENST00000542685 Q6ZPA2 131 aa6.65□□□□□ -1.34
XRCC4-206ENST00000542685 RASSF3Q86WH2 238 aa6.65□□□□□ -1.34
XRCC4-206ENST00000542685 ERC1Q8IUD2 1116 aa6.65□□□□□ -1.34
XRCC4-206ENST00000542685 C10orf67Q8IYJ2 551 aa6.65□□□□□ -1.34
XRCC4-206ENST00000542685 RPUSD2Q8IZ73 545 aaKnown RBP6.65□□□□□ -1.34
XRCC4-206ENST00000542685 SYNE4Q8N205 404 aa6.65□□□□□ -1.34
XRCC4-206ENST00000542685 GLB1L3Q8NCI6 653 aaPredicted RBP6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms