RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 NARSO43776 548 aaKnown RBP4.09□□□□□ -1.75
USP28-210ENST00000542033 AKAP8O43823 692 aaKnown RBP4.09□□□□□ -1.75
USP28-210ENST00000542033 CTNND1O60716 968 aaKnown RBP4.09□□□□□ -1.75
USP28-210ENST00000542033 GNAI3P08754 354 aa4.09□□□□□ -1.75
USP28-210ENST00000542033 FTH1P19P0C7X4 201 aa4.09□□□□□ -1.75
USP28-210ENST00000542033 LPOP22079 712 aaPredicted RBP4.09□□□□□ -1.75
USP28-210ENST00000542033 SLC6A2P23975 617 aa4.09□□□□□ -1.75
USP28-210ENST00000542033 IL12RB1P42701 662 aa4.09□□□□□ -1.75
USP28-210ENST00000542033 FXR1P51114 621 aaKnown RBP eCLIP4.09□□□□□ -1.75
USP28-210ENST00000542033 MAP2K6P52564 334 aa4.09□□□□□ -1.75
USP28-210ENST00000542033 HK3P52790 923 aa4.09□□□□□ -1.75
USP28-210ENST00000542033 GNAI1P63096 354 aa4.09□□□□□ -1.75
USP28-210ENST00000542033 MXRA7P84157 204 aa4.09□□□□□ -1.75
USP28-210ENST00000542033 SNAPC2Q13487 334 aa4.09□□□□□ -1.75
USP28-210ENST00000542033 HLTFQ14527 1009 aaKnown RBP eCLIP4.09□□□□□ -1.75
USP28-210ENST00000542033 FLYWCH1Q4VC44 716 aa4.09□□□□□ -1.75
USP28-210ENST00000542033 TSHZ3Q63HK5 1081 aa4.09□□□□□ -1.75
USP28-210ENST00000542033 HEATR3Q7Z4Q2 680 aa4.09□□□□□ -1.75
USP28-210ENST00000542033 DENND1CQ8IV53 801 aa4.09□□□□□ -1.75
USP28-210ENST00000542033 SH2D3CQ8N5H7 860 aa4.09□□□□□ -1.75
USP28-210ENST00000542033 AMER2Q8N7J2 671 aa4.09□□□□□ -1.75
USP28-210ENST00000542033 MAGEB6Q8N7X4 407 aa4.09□□□□□ -1.75
USP28-210ENST00000542033 IL17RDQ8NFM7 739 aa4.09□□□□□ -1.75
USP28-210ENST00000542033 SLC35G2Q8TBE7 412 aa4.09□□□□□ -1.75
USP28-210ENST00000542033 TBC1D15Q8TC07 691 aa4.09□□□□□ -1.75
USP28-210ENST00000542033 TSR2Q969E8 191 aaKnown RBP4.09□□□□□ -1.75
USP28-210ENST00000542033 MTFMTQ96DP5 389 aaKnown RBP4.09□□□□□ -1.75
USP28-210ENST00000542033 CDK5RAP3Q96JB5 506 aa4.09□□□□□ -1.75
USP28-210ENST00000542033 FAM167AQ96KS9 214 aa4.09□□□□□ -1.75
USP28-210ENST00000542033 WDCPQ9H6R7 721 aa4.09□□□□□ -1.75
USP28-210ENST00000542033 NRDE2Q9H7Z3 1164 aa4.09□□□□□ -1.75
USP28-210ENST00000542033 MMRN2Q9H8L6 949 aa4.09□□□□□ -1.75
USP28-210ENST00000542033 ANLNQ9NQW6 1124 aa4.09□□□□□ -1.75
USP28-210ENST00000542033 LMBRD1Q9NUN5 540 aa4.09□□□□□ -1.75
USP28-210ENST00000542033 ABCF2Q9UG63 623 aa4.09□□□□□ -1.75
USP28-210ENST00000542033 GRXCR1A8MXD5 290 aa4.08□□□□□ -1.76
USP28-210ENST00000542033 F2RL2O00254 374 aa4.08□□□□□ -1.76
USP28-210ENST00000542033 RNASET2O00584 256 aaKnown RBP4.08□□□□□ -1.76
USP28-210ENST00000542033 ERC2O15083 957 aa4.08□□□□□ -1.76
USP28-210ENST00000542033 CAND2O75155 1236 aa4.08□□□□□ -1.76
USP28-210ENST00000542033 PEX14O75381 377 aa4.08□□□□□ -1.76
USP28-210ENST00000542033 RPS6KA4O75676 772 aa4.08□□□□□ -1.76
USP28-210ENST00000542033 HLA-DOAP06340 250 aa4.08□□□□□ -1.76
USP28-210ENST00000542033 SBK3P0C264 359 aa4.08□□□□□ -1.76
USP28-210ENST00000542033 LAG3P18627 525 aa4.08□□□□□ -1.76
USP28-210ENST00000542033 SLC25A3Q00325 362 aa4.08□□□□□ -1.76
USP28-210ENST00000542033 ARHGAP29Q52LW3 1261 aa4.08□□□□□ -1.76
USP28-210ENST00000542033 FAM102AQ5T9C2 384 aaPredicted RBP4.08□□□□□ -1.76
USP28-210ENST00000542033 AGAP9Q5VTM2 703 aa4.08□□□□□ -1.76
USP28-210ENST00000542033 RHOT2Q8IXI1 618 aa4.08□□□□□ -1.76
USP28-210ENST00000542033 OR56A1Q8NGH5 318 aa4.08□□□□□ -1.76
USP28-210ENST00000542033 MORC4Q8TE76 937 aa4.08□□□□□ -1.76
USP28-210ENST00000542033 LENG9Q96B70 501 aa4.08□□□□□ -1.76
USP28-210ENST00000542033 SORCS2Q96PQ0 1159 aa4.08□□□□□ -1.76
USP28-210ENST00000542033 TAAR9Q96RI9 348 aa4.08□□□□□ -1.76
USP28-210ENST00000542033 CGRRF1Q99675 332 aa4.08□□□□□ -1.76
USP28-210ENST00000542033 SCAND2PQ9GZW5 306 aaPredicted RBP4.08□□□□□ -1.76
USP28-210ENST00000542033 PCED1AQ9H1Q7 454 aa4.08□□□□□ -1.76
USP28-210ENST00000542033 RNPEPQ9H4A4 650 aa4.08□□□□□ -1.76
USP28-210ENST00000542033 SLC2A4RGQ9NR83 387 aa4.08□□□□□ -1.76
USP28-210ENST00000542033 PNPOQ9NVS9 261 aa4.08□□□□□ -1.76
USP28-210ENST00000542033 SIDT1Q9NXL6 827 aaKnown RBP4.08□□□□□ -1.76
USP28-210ENST00000542033 JKAMPQ9P055 326 aa4.08□□□□□ -1.76
USP28-210ENST00000542033 FZD1Q9UP38 647 aa4.08□□□□□ -1.76
USP28-210ENST00000542033 STXBP5LQ9Y2K9 1186 aa4.08□□□□□ -1.76
USP28-210ENST00000542033 NR2E3Q9Y5X4 410 aa4.08□□□□□ -1.76
USP28-210ENST00000542033 LOC102724159A0A0B4J2E5 919 aa4.07□□□□□ -1.76
USP28-210ENST00000542033 AHRRA9YTQ3 701 aa4.07□□□□□ -1.76
USP28-210ENST00000542033 H3BML4 177 aa4.07□□□□□ -1.76
USP28-210ENST00000542033 ZNF185O15231 689 aa4.07□□□□□ -1.76
USP28-210ENST00000542033 PRPF3O43395 683 aaKnown RBP4.07□□□□□ -1.76
USP28-210ENST00000542033 PLIN1O60240 522 aa4.07□□□□□ -1.76
USP28-210ENST00000542033 SLC43A1O75387 559 aa4.07□□□□□ -1.76
USP28-210ENST00000542033 AGFG2O95081 481 aa4.07□□□□□ -1.76
USP28-210ENST00000542033 ALDH2P05091 517 aa4.07□□□□□ -1.76
USP28-210ENST00000542033 CKBP12277 381 aa4.07□□□□□ -1.76
USP28-210ENST00000542033 TYRP14679 529 aa4.07□□□□□ -1.76
USP28-210ENST00000542033 ATF3P18847 181 aa4.07□□□□□ -1.76
USP28-210ENST00000542033 GCSHP23434 173 aa4.07□□□□□ -1.76
USP28-210ENST00000542033 HTR1BP28222 390 aa4.07□□□□□ -1.76
USP28-210ENST00000542033 ZEB1P37275 1124 aaPredicted RBP4.07□□□□□ -1.76
USP28-210ENST00000542033 GNALP38405 381 aa4.07□□□□□ -1.76
USP28-210ENST00000542033 PIK3CGP48736 1102 aa4.07□□□□□ -1.76
USP28-210ENST00000542033 FHL2Q14192 279 aa4.07□□□□□ -1.76
USP28-210ENST00000542033 PWP2Q15269 919 aaKnown RBP4.07□□□□□ -1.76
USP28-210ENST00000542033 GFOD2Q3B7J2 385 aa4.07□□□□□ -1.76
USP28-210ENST00000542033 TIGD2Q4W5G0 525 aa4.07□□□□□ -1.76
USP28-210ENST00000542033 PDCD4Q53EL6 469 aaKnown RBP4.07□□□□□ -1.76
USP28-210ENST00000542033 CCDC93Q567U6 631 aa4.07□□□□□ -1.76
USP28-210ENST00000542033 LY6G5CQ5SRR4 150 aa4.07□□□□□ -1.76
USP28-210ENST00000542033 UTP14CQ5TAP6 766 aaKnown RBP4.07□□□□□ -1.76
USP28-210ENST00000542033 FNDC7Q5VTL7 733 aa4.07□□□□□ -1.76
USP28-210ENST00000542033 ARMC6Q6NXE6 501 aa4.07□□□□□ -1.76
USP28-210ENST00000542033 FOXR2Q6PJQ5 311 aa4.07□□□□□ -1.76
USP28-210ENST00000542033 B3GNT9Q6UX72 402 aa4.07□□□□□ -1.76
USP28-210ENST00000542033 LRRC55Q6ZSA7 311 aa4.07□□□□□ -1.76
USP28-210ENST00000542033 ZNF365Q70YC5 407 aa4.07□□□□□ -1.76
USP28-210ENST00000542033 DAAM2Q86T65 1068 aa4.07□□□□□ -1.76
USP28-210ENST00000542033 ZFPM1Q8IX07 1006 aa4.07□□□□□ -1.76
USP28-210ENST00000542033 KLHDC4Q8TBB5 520 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms