RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 G3BP2Q9UN86 482 aaKnown RBP15.28■□□□□ 0.04
SFSWAP-210ENST00000541286 DAAM1Q9Y4D1 1078 aa15.28■□□□□ 0.04
SFSWAP-210ENST00000541286 GOLGA6L10A0A0M3HER8 536 aa15.28■□□□□ 0.04
SFSWAP-210ENST00000541286 A6NNZ2 444 aa15.28■□□□□ 0.04
SFSWAP-210ENST00000541286 EYA4O95677 639 aa15.28■□□□□ 0.04
SFSWAP-210ENST00000541286 CHN1P15882 459 aa15.28■□□□□ 0.04
SFSWAP-210ENST00000541286 MARCKSL1P49006 195 aa15.28■□□□□ 0.04
SFSWAP-210ENST00000541286 TUBB8Q3ZCM7 444 aa15.28■□□□□ 0.04
SFSWAP-210ENST00000541286 OTUD6AQ7L8S5 288 aa15.28■□□□□ 0.04
SFSWAP-210ENST00000541286 LRRC34Q8IZ02 419 aa15.28■□□□□ 0.04
SFSWAP-210ENST00000541286 C18orf8Q96DM3 657 aa15.28■□□□□ 0.04
SFSWAP-210ENST00000541286 INTS2Q9H0H0 1204 aaKnown RBP15.28■□□□□ 0.04
SFSWAP-210ENST00000541286 SEPT9Q9UHD8 586 aaPredicted RBP15.28■□□□□ 0.04
SFSWAP-210ENST00000541286 CCT8L1PA6NM43 557 aa15.27■□□□□ 0.04
SFSWAP-210ENST00000541286 K7ENM7 598 aa15.27■□□□□ 0.04
SFSWAP-210ENST00000541286 ZNF865P0CJ78 1059 aaPredicted RBP15.27■□□□□ 0.04
SFSWAP-210ENST00000541286 DLG4P78352 724 aa15.27■□□□□ 0.04
SFSWAP-210ENST00000541286 ARHGAP1Q07960 439 aa15.27■□□□□ 0.04
SFSWAP-210ENST00000541286 MTFR1Q15390 333 aa15.27■□□□□ 0.04
SFSWAP-210ENST00000541286 CCDC127Q96BQ5 260 aa15.27■□□□□ 0.04
SFSWAP-210ENST00000541286 ARHGEF35A5YM69 484 aa15.27■□□□□ 0.03
SFSWAP-210ENST00000541286 DRD4P21917 467 aa15.27■□□□□ 0.03
SFSWAP-210ENST00000541286 KCNJ1P48048 391 aa15.27■□□□□ 0.03
SFSWAP-210ENST00000541286 IFI35P80217 286 aaPredicted RBP15.27■□□□□ 0.03
SFSWAP-210ENST00000541286 PLCB4Q15147 1175 aa15.27■□□□□ 0.03
SFSWAP-210ENST00000541286 CPNE8Q86YQ8 564 aa15.27■□□□□ 0.03
SFSWAP-210ENST00000541286 LRRC71Q8N4P6 559 aa15.27■□□□□ 0.03
SFSWAP-210ENST00000541286 CCDC197Q8NCU1 140 aa15.27■□□□□ 0.03
SFSWAP-210ENST00000541286 KAT5Q92993 513 aa15.27■□□□□ 0.03
SFSWAP-210ENST00000541286 TATDN2Q93075 761 aa15.27■□□□□ 0.03
SFSWAP-210ENST00000541286 BEGAINQ9BUH8 593 aa15.27■□□□□ 0.03
SFSWAP-210ENST00000541286 MAP3K20Q9NYL2 800 aaKnown RBP15.27■□□□□ 0.03
SFSWAP-210ENST00000541286 TMEM59LQ9UK28 342 aa15.27■□□□□ 0.03
SFSWAP-210ENST00000541286 FTLP02792 175 aaPredicted RBP15.26■□□□□ 0.03
SFSWAP-210ENST00000541286 MMEP08473 750 aa15.26■□□□□ 0.03
SFSWAP-210ENST00000541286 RGS2P41220 211 aa15.26■□□□□ 0.03
SFSWAP-210ENST00000541286 ZNF200P98182 395 aaPredicted RBP15.26■□□□□ 0.03
SFSWAP-210ENST00000541286 PRKCEQ02156 737 aa15.26■□□□□ 0.03
SFSWAP-210ENST00000541286 TNFAIP2Q03169 654 aa15.26■□□□□ 0.03
SFSWAP-210ENST00000541286 XRCC4Q13426 336 aa15.26■□□□□ 0.03
SFSWAP-210ENST00000541286 ZKSCAN8Q15776 578 aaPredicted RBP15.26■□□□□ 0.03
SFSWAP-210ENST00000541286 CELF3Q5SZQ8 465 aaKnown RBP15.26■□□□□ 0.03
SFSWAP-210ENST00000541286 TMC3Q7Z5M5 1100 aa15.26■□□□□ 0.03
SFSWAP-210ENST00000541286 MREGQ8N565 214 aa15.26■□□□□ 0.03
SFSWAP-210ENST00000541286 RAET1EQ8TD07 263 aa15.26■□□□□ 0.03
SFSWAP-210ENST00000541286 ALG3Q92685 438 aa15.26■□□□□ 0.03
SFSWAP-210ENST00000541286 KRT35Q92764 455 aa15.26■□□□□ 0.03
SFSWAP-210ENST00000541286 GPR20Q99678 358 aa15.26■□□□□ 0.03
SFSWAP-210ENST00000541286 C15orf41Q9Y2V0 281 aa15.26■□□□□ 0.03
SFSWAP-210ENST00000541286 PCDHA10Q9Y5I2 948 aa15.26■□□□□ 0.03
SFSWAP-210ENST00000541286 MYH9P35579 1960 aaKnown RBP15.26■□□□□ 0.03
SFSWAP-210ENST00000541286 CCDC188H7C350 402 aa15.26■□□□□ 0.03
SFSWAP-210ENST00000541286 ADCY3O60266 1144 aa15.26■□□□□ 0.03
SFSWAP-210ENST00000541286 C6orf222P0C671 652 aaPredicted RBP15.26■□□□□ 0.03
SFSWAP-210ENST00000541286 FGFR4P22455 802 aa15.26■□□□□ 0.03
SFSWAP-210ENST00000541286 YWHABP31946 246 aaKnown RBP15.26■□□□□ 0.03
SFSWAP-210ENST00000541286 VPS41P49754 854 aa15.26■□□□□ 0.03
SFSWAP-210ENST00000541286 LBX1P52954 281 aa15.26■□□□□ 0.03
SFSWAP-210ENST00000541286 TMEM62Q0P6H9 643 aa15.26■□□□□ 0.03
SFSWAP-210ENST00000541286 GRIK3Q13003 919 aa15.26■□□□□ 0.03
SFSWAP-210ENST00000541286 XKR9Q5GH70 373 aa15.26■□□□□ 0.03
SFSWAP-210ENST00000541286 ABHD15Q6UXT9 468 aa15.26■□□□□ 0.03
SFSWAP-210ENST00000541286 FAM47EQ6ZV65 393 aa15.26■□□□□ 0.03
SFSWAP-210ENST00000541286 FBXO25Q8TCJ0 367 aa15.26■□□□□ 0.03
SFSWAP-210ENST00000541286 RFFLQ8WZ73 363 aa15.26■□□□□ 0.03
SFSWAP-210ENST00000541286 TMEM143Q96AN5 459 aa15.26■□□□□ 0.03
SFSWAP-210ENST00000541286 FAM84AQ96KN4 292 aa15.26■□□□□ 0.03
SFSWAP-210ENST00000541286 RIT2Q99578 217 aa15.26■□□□□ 0.03
SFSWAP-210ENST00000541286 SUCLA2Q9P2R7 463 aaPredicted RBP15.26■□□□□ 0.03
SFSWAP-210ENST00000541286 MGAMO43451 1857 aa15.26■□□□□ 0.03
SFSWAP-210ENST00000541286 ASB14A6NK59 587 aa15.26■□□□□ 0.03
SFSWAP-210ENST00000541286 ALDH1A1P00352 501 aa15.26■□□□□ 0.03
SFSWAP-210ENST00000541286 IRX1P78414 480 aaPredicted RBP15.26■□□□□ 0.03
SFSWAP-210ENST00000541286 EPM2AIP1Q7L775 607 aaPredicted RBP15.26■□□□□ 0.03
SFSWAP-210ENST00000541286 CCDC50Q8IVM0 306 aa15.26■□□□□ 0.03
SFSWAP-210ENST00000541286 PPM1KQ8N3J5 372 aa15.26■□□□□ 0.03
SFSWAP-210ENST00000541286 EVPLQ92817 2033 aa15.26■□□□□ 0.03
SFSWAP-210ENST00000541286 CHMP6Q96FZ7 201 aa15.26■□□□□ 0.03
SFSWAP-210ENST00000541286 APBA2Q99767 749 aa15.26■□□□□ 0.03
SFSWAP-210ENST00000541286 WDR64B1ANS9 1081 aa15.25■□□□□ 0.03
SFSWAP-210ENST00000541286 H0YGN5 161 aa15.25■□□□□ 0.03
SFSWAP-210ENST00000541286 TBX3O15119 743 aa15.25■□□□□ 0.03
SFSWAP-210ENST00000541286 UBOX5O94941 541 aa15.25■□□□□ 0.03
SFSWAP-210ENST00000541286 CALCAP01258 141 aa15.25■□□□□ 0.03
SFSWAP-210ENST00000541286 TTLL4Q14679 1199 aa15.25■□□□□ 0.03
SFSWAP-210ENST00000541286 DCAF12L1Q5VU92 463 aa15.25■□□□□ 0.03
SFSWAP-210ENST00000541286 PHLDB3Q6NSJ2 640 aa15.25■□□□□ 0.03
SFSWAP-210ENST00000541286 DPY19L2P1Q6NXN4 242 aa15.25■□□□□ 0.03
SFSWAP-210ENST00000541286 CCDC105Q8IYK2 499 aa15.25■□□□□ 0.03
SFSWAP-210ENST00000541286 ZSWIM2Q8NEG5 633 aa15.25■□□□□ 0.03
SFSWAP-210ENST00000541286 AGPAT3Q9NRZ7 376 aa15.25■□□□□ 0.03
SFSWAP-210ENST00000541286 ALG6Q9Y672 507 aa15.25■□□□□ 0.03
SFSWAP-210ENST00000541286 NFS1Q9Y697 457 aa15.25■□□□□ 0.03
SFSWAP-210ENST00000541286 TRIP12Q14669 1992 aaPredicted RBP15.25■□□□□ 0.03
SFSWAP-210ENST00000541286 EMSYQ7Z589 1322 aa15.25■□□□□ 0.03
SFSWAP-210ENST00000541286 MAP3K13O43283 966 aa15.25■□□□□ 0.03
SFSWAP-210ENST00000541286 SPOPO43791 374 aa15.25■□□□□ 0.03
SFSWAP-210ENST00000541286 QARSP47897 775 aaKnown RBP15.25■□□□□ 0.03
SFSWAP-210ENST00000541286 OR6J1Q8NGC5 347 aa15.25■□□□□ 0.03
SFSWAP-210ENST00000541286 GTF3C2Q8WUA4 911 aaPredicted RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms