RNA–Protein interactions for RNA: ENST00000540503.1

PPFIBP1-212, Transcript of PPFIA binding protein 1, humanhuman

TSL 4

Gene PPFIBP1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIBP1-212ENST00000540503 ZNF516Q92618 1163 aa11.1□□□□□ -0.63
PPFIBP1-212ENST00000540503 FAM81BQ96LP2 452 aa11.1□□□□□ -0.63
PPFIBP1-212ENST00000540503 PCMTD1Q96MG8 357 aaPredicted RBP11.1□□□□□ -0.63
PPFIBP1-212ENST00000540503 ZNF558Q96NG5 402 aa11.1□□□□□ -0.63
PPFIBP1-212ENST00000540503 NT5C1BQ96P26 610 aa11.1□□□□□ -0.63
PPFIBP1-212ENST00000540503 COLEC11Q9BWP8 271 aa11.1□□□□□ -0.63
PPFIBP1-212ENST00000540503 TRIM5Q9C035 493 aa11.1□□□□□ -0.63
PPFIBP1-212ENST00000540503 INTS2Q9H0H0 1204 aaKnown RBP11.1□□□□□ -0.63
PPFIBP1-212ENST00000540503 CXCL16Q9H2A7 254 aa11.1□□□□□ -0.63
PPFIBP1-212ENST00000540503 NRDE2Q9H7Z3 1164 aa11.1□□□□□ -0.63
PPFIBP1-212ENST00000540503 GRPEL1Q9HAV7 217 aa11.1□□□□□ -0.63
PPFIBP1-212ENST00000540503 GOLGA2P5Q9HBQ8 144 aa11.1□□□□□ -0.63
PPFIBP1-212ENST00000540503 RTN4Q9NQC3 1192 aaKnown RBP11.1□□□□□ -0.63
PPFIBP1-212ENST00000540503 RAB20Q9NX57 234 aa11.1□□□□□ -0.63
PPFIBP1-212ENST00000540503 AGAP1Q9UPQ3 857 aa11.1□□□□□ -0.63
PPFIBP1-212ENST00000540503 COQ4Q9Y3A0 265 aa11.1□□□□□ -0.63
PPFIBP1-212ENST00000540503 NUB1Q9Y5A7 615 aa11.1□□□□□ -0.63
PPFIBP1-212ENST00000540503 PCDHA11Q9Y5I1 949 aa11.1□□□□□ -0.63
PPFIBP1-212ENST00000540503 SCN1AP35498 2009 aa11.09□□□□□ -0.63
PPFIBP1-212ENST00000540503 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.09□□□□□ -0.63
PPFIBP1-212ENST00000540503 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.09□□□□□ -0.63
PPFIBP1-212ENST00000540503 A0A1W2PPC1 479 aa11.09□□□□□ -0.63
PPFIBP1-212ENST00000540503 A0A1W2PQC6 194 aa11.09□□□□□ -0.63
PPFIBP1-212ENST00000540503 ANO9A1A5B4 782 aa11.09□□□□□ -0.63
PPFIBP1-212ENST00000540503 FSD2A1L4K1 749 aa11.09□□□□□ -0.63
PPFIBP1-212ENST00000540503 TMEM189-UBE2V1I3L0A0 370 aa11.09□□□□□ -0.63
PPFIBP1-212ENST00000540503 PIRO00625 290 aa11.09□□□□□ -0.63
PPFIBP1-212ENST00000540503 DDHD2O94830 711 aa11.09□□□□□ -0.63
PPFIBP1-212ENST00000540503 ALDH2P05091 517 aa11.09□□□□□ -0.63
PPFIBP1-212ENST00000540503 RFX1P22670 979 aa11.09□□□□□ -0.63
PPFIBP1-212ENST00000540503 ALDH7A1P49419 539 aaKnown RBP11.09□□□□□ -0.63
PPFIBP1-212ENST00000540503 MRE11P49959 708 aa11.09□□□□□ -0.63
PPFIBP1-212ENST00000540503 CLCNKBP51801 687 aa11.09□□□□□ -0.63
PPFIBP1-212ENST00000540503 TNNC1P63316 161 aa11.09□□□□□ -0.63
PPFIBP1-212ENST00000540503 NOP14P78316 857 aaKnown RBP11.09□□□□□ -0.63
PPFIBP1-212ENST00000540503 ELAVL2Q12926 359 aaKnown RBP11.09□□□□□ -0.63
PPFIBP1-212ENST00000540503 GSE1Q14687 1217 aa11.09□□□□□ -0.63
PPFIBP1-212ENST00000540503 UPP1Q16831 310 aa11.09□□□□□ -0.63
PPFIBP1-212ENST00000540503 ZNF667Q5HYK9 610 aa11.09□□□□□ -0.63
PPFIBP1-212ENST00000540503 DCLRE1AQ6PJP8 1040 aa11.09□□□□□ -0.63
PPFIBP1-212ENST00000540503 CHRDL2Q6WN34 429 aa11.09□□□□□ -0.63
PPFIBP1-212ENST00000540503 ZNF280BQ86YH2 543 aa11.09□□□□□ -0.63
PPFIBP1-212ENST00000540503 TAS1R2Q8TE23 839 aa11.09□□□□□ -0.63
PPFIBP1-212ENST00000540503 ANP32BQ92688 251 aaKnown RBP11.09□□□□□ -0.63
PPFIBP1-212ENST00000540503 IQCDQ96DY2 449 aa11.09□□□□□ -0.63
PPFIBP1-212ENST00000540503 HPDLQ96IR7 371 aa11.09□□□□□ -0.63
PPFIBP1-212ENST00000540503 FAXDC2Q96IV6 333 aa11.09□□□□□ -0.63
PPFIBP1-212ENST00000540503 SAMD11Q96NU1 681 aa11.09□□□□□ -0.63
PPFIBP1-212ENST00000540503 ERGIC2Q96RQ1 377 aa11.09□□□□□ -0.63
PPFIBP1-212ENST00000540503 LSM14BQ9BX40 385 aaKnown RBP11.09□□□□□ -0.63
PPFIBP1-212ENST00000540503 XPO4Q9C0E2 1151 aaKnown RBP11.09□□□□□ -0.63
PPFIBP1-212ENST00000540503 CWH43Q9H720 699 aa11.09□□□□□ -0.63
PPFIBP1-212ENST00000540503 VRTNQ9H8Y1 702 aa11.09□□□□□ -0.63
PPFIBP1-212ENST00000540503 STK39Q9UEW8 545 aa11.09□□□□□ -0.63
PPFIBP1-212ENST00000540503 SIX4Q9UIU6 781 aa11.09□□□□□ -0.63
PPFIBP1-212ENST00000540503 MSRAQ9UJ68 235 aa11.09□□□□□ -0.63
PPFIBP1-212ENST00000540503 FAN1Q9Y2M0 1017 aa11.09□□□□□ -0.63
PPFIBP1-212ENST00000540503 PRG3Q9Y2Y8 225 aaPredicted RBP11.09□□□□□ -0.63
PPFIBP1-212ENST00000540503 PCDHB12Q9Y5F1 795 aa11.09□□□□□ -0.63
PPFIBP1-212ENST00000540503 MRPL42Q9Y6G3 142 aaKnown RBP11.09□□□□□ -0.63
PPFIBP1-212ENST00000540503 SF3B1O75533 1304 aaKnown RBP eCLIP11.09□□□□□ -0.63
PPFIBP1-212ENST00000540503 TRAPPC3O43617 180 aa11.08□□□□□ -0.64
PPFIBP1-212ENST00000540503 B3GAT3O94766 335 aa11.08□□□□□ -0.64
PPFIBP1-212ENST00000540503 VNN1O95497 513 aa11.08□□□□□ -0.64
PPFIBP1-212ENST00000540503 ASS1P00966 412 aaKnown RBP11.08□□□□□ -0.64
PPFIBP1-212ENST00000540503 TBXAS1P24557 533 aaPredicted RBP11.08□□□□□ -0.64
PPFIBP1-212ENST00000540503 SLC11A1P49279 550 aa11.08□□□□□ -0.64
PPFIBP1-212ENST00000540503 BCAR1P56945 870 aa11.08□□□□□ -0.64
PPFIBP1-212ENST00000540503 MYL6P60660 151 aa11.08□□□□□ -0.64
PPFIBP1-212ENST00000540503 YWHAEP62258 255 aaKnown RBP11.08□□□□□ -0.64
PPFIBP1-212ENST00000540503 TRIM14Q14142 442 aa11.08□□□□□ -0.64
PPFIBP1-212ENST00000540503 NR1I3Q14994 352 aa11.08□□□□□ -0.64
PPFIBP1-212ENST00000540503 SYCP1Q15431 976 aa11.08□□□□□ -0.64
PPFIBP1-212ENST00000540503 TRIM65Q6PJ69 517 aa11.08□□□□□ -0.64
PPFIBP1-212ENST00000540503 KCNT2Q6UVM3 1135 aa11.08□□□□□ -0.64
PPFIBP1-212ENST00000540503 DSTYKQ6XUX3 929 aa11.08□□□□□ -0.64
PPFIBP1-212ENST00000540503 COLGALT1Q8NBJ5 622 aa11.08□□□□□ -0.64
PPFIBP1-212ENST00000540503 EHBP1Q8NDI1 1231 aa11.08□□□□□ -0.64
PPFIBP1-212ENST00000540503 NEK11Q8NG66 645 aa11.08□□□□□ -0.64
PPFIBP1-212ENST00000540503 TMEM169Q96HH4 297 aa11.08□□□□□ -0.64
PPFIBP1-212ENST00000540503 MRFAP1L1Q96HT8 127 aa11.08□□□□□ -0.64
PPFIBP1-212ENST00000540503 FAM84AQ96KN4 292 aa11.08□□□□□ -0.64
PPFIBP1-212ENST00000540503 CRACR2AQ9BSW2 395 aa11.08□□□□□ -0.64
PPFIBP1-212ENST00000540503 NIF3L1Q9GZT8 377 aa11.08□□□□□ -0.64
PPFIBP1-212ENST00000540503 PLCB1Q9NQ66 1216 aa11.08□□□□□ -0.64
PPFIBP1-212ENST00000540503 DNAJB4Q9UDY4 337 aa11.08□□□□□ -0.64
PPFIBP1-212ENST00000540503 TSC2P49815 1807 aa11.07□□□□□ -0.64
PPFIBP1-212ENST00000540503 GOLGA6L6A8MZA4 724 aa11.07□□□□□ -0.64
PPFIBP1-212ENST00000540503 NRP1O14786 923 aa11.07□□□□□ -0.64
PPFIBP1-212ENST00000540503 TEX33O43247 280 aa11.07□□□□□ -0.64
PPFIBP1-212ENST00000540503 HUS1O60921 280 aa11.07□□□□□ -0.64
PPFIBP1-212ENST00000540503 TADA2AO75478 443 aa11.07□□□□□ -0.64
PPFIBP1-212ENST00000540503 KIF4AO95239 1232 aa11.07□□□□□ -0.64
PPFIBP1-212ENST00000540503 GALTP07902 379 aa11.07□□□□□ -0.64
PPFIBP1-212ENST00000540503 TPM1P09493 284 aa11.07□□□□□ -0.64
PPFIBP1-212ENST00000540503 ODC1P11926 461 aa11.07□□□□□ -0.64
PPFIBP1-212ENST00000540503 CTNNB1P35222 781 aa11.07□□□□□ -0.64
PPFIBP1-212ENST00000540503 RABGGTBP53611 331 aa11.07□□□□□ -0.64
PPFIBP1-212ENST00000540503 LILRA4P59901 499 aa11.07□□□□□ -0.64
PPFIBP1-212ENST00000540503 ENOSF1Q7L5Y1 443 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms