RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 NAA35Q5VZE5 725 aa7.75□□□□□ -1.17
MSH6-209ENST00000538136 MFSD5Q6N075 450 aa7.75□□□□□ -1.17
MSH6-209ENST00000538136 C1orf228Q6PIY5 440 aa7.75□□□□□ -1.17
MSH6-209ENST00000538136 NIPA1Q7RTP0 329 aa7.75□□□□□ -1.17
MSH6-209ENST00000538136 SRGAP1Q7Z6B7 1085 aa7.75□□□□□ -1.17
MSH6-209ENST00000538136 YAF2Q8IY57 180 aa7.75□□□□□ -1.17
MSH6-209ENST00000538136 AFAP1L1Q8TED9 768 aa7.75□□□□□ -1.17
MSH6-209ENST00000538136 NDRG1Q92597 394 aaKnown RBP7.75□□□□□ -1.17
MSH6-209ENST00000538136 NOX5Q96PH1 765 aa7.75□□□□□ -1.17
MSH6-209ENST00000538136 DHX33Q9H6R0 707 aaKnown RBP7.75□□□□□ -1.17
MSH6-209ENST00000538136 SPTLC3Q9NUV7 552 aa7.75□□□□□ -1.17
MSH6-209ENST00000538136 ADAMTS7Q9UKP4 1686 aa7.75□□□□□ -1.17
MSH6-209ENST00000538136 ANKRD36CQ5JPF3 1778 aa7.74□□□□□ -1.17
MSH6-209ENST00000538136 SMIM28A0A1B0GU29 152 aa7.74□□□□□ -1.17
MSH6-209ENST00000538136 MGEA5O60502 916 aa7.74□□□□□ -1.17
MSH6-209ENST00000538136 SRGAP2O75044 1071 aa7.74□□□□□ -1.17
MSH6-209ENST00000538136 TIMP1P01033 207 aa7.74□□□□□ -1.17
MSH6-209ENST00000538136 SRGAP2BP0DMP2 458 aa7.74□□□□□ -1.17
MSH6-209ENST00000538136 VPS41P49754 854 aa7.74□□□□□ -1.17
MSH6-209ENST00000538136 DPYDQ12882 1025 aa7.74□□□□□ -1.17
MSH6-209ENST00000538136 SNW1Q13573 536 aaKnown RBP7.74□□□□□ -1.17
MSH6-209ENST00000538136 KRT39Q6A163 491 aa7.74□□□□□ -1.17
MSH6-209ENST00000538136 PSRC1Q6PGN9 363 aaPredicted RBP7.74□□□□□ -1.17
MSH6-209ENST00000538136 INTS8Q75QN2 995 aaKnown RBP7.74□□□□□ -1.17
MSH6-209ENST00000538136 DAW1Q8N136 415 aa7.74□□□□□ -1.17
MSH6-209ENST00000538136 FBXL13Q8NEE6 735 aa7.74□□□□□ -1.17
MSH6-209ENST00000538136 CPA5Q8WXQ8 436 aa7.74□□□□□ -1.17
MSH6-209ENST00000538136 C16orf45Q96MC5 204 aaPredicted RBP7.74□□□□□ -1.17
MSH6-209ENST00000538136 RHOBTB2Q9BYZ6 727 aa7.74□□□□□ -1.17
MSH6-209ENST00000538136 MFSD1Q9H3U5 465 aa7.74□□□□□ -1.17
MSH6-209ENST00000538136 NFASCO94856 1347 aa7.74□□□□□ -1.17
MSH6-209ENST00000538136 CYP3A7-CYP3A51PA0A087WV96 503 aa7.74□□□□□ -1.17
MSH6-209ENST00000538136 GOLGA6CA6NDK9 693 aa7.74□□□□□ -1.17
MSH6-209ENST00000538136 GOLGA6BA6NDN3 693 aa7.74□□□□□ -1.17
MSH6-209ENST00000538136 ATMINO43313 823 aaPredicted RBP7.74□□□□□ -1.17
MSH6-209ENST00000538136 GOLGA6DP0CG33 693 aa7.74□□□□□ -1.17
MSH6-209ENST00000538136 CYP3A7P24462 503 aa7.74□□□□□ -1.17
MSH6-209ENST00000538136 ITKQ08881 620 aa7.74□□□□□ -1.17
MSH6-209ENST00000538136 CCDC122Q5T0U0 273 aa7.74□□□□□ -1.17
MSH6-209ENST00000538136 KDELC2Q7Z4H8 507 aa7.74□□□□□ -1.17
MSH6-209ENST00000538136 SERINC5Q86VE9 423 aa7.74□□□□□ -1.17
MSH6-209ENST00000538136 FAM126BQ8IXS8 530 aa7.74□□□□□ -1.17
MSH6-209ENST00000538136 IPO4Q8TEX9 1081 aaKnown RBP7.74□□□□□ -1.17
MSH6-209ENST00000538136 CAPZA3Q96KX2 299 aa7.74□□□□□ -1.17
MSH6-209ENST00000538136 SEMA6BQ9H3T3 888 aa7.74□□□□□ -1.17
MSH6-209ENST00000538136 TBC1D13Q9NVG8 400 aa7.74□□□□□ -1.17
MSH6-209ENST00000538136 GOLGA6AQ9NYA3 693 aa7.74□□□□□ -1.17
MSH6-209ENST00000538136 UBQLN1Q9UMX0 589 aaKnown RBP7.74□□□□□ -1.17
MSH6-209ENST00000538136 INSL6Q9Y581 213 aa7.74□□□□□ -1.17
MSH6-209ENST00000538136 CDK5RAP2Q96SN8 1893 aa7.74□□□□□ -1.17
MSH6-209ENST00000538136 CITO14578 2027 aa7.74□□□□□ -1.17
MSH6-209ENST00000538136 PVALEFA0A1B0GWK0 134 aa7.74□□□□□ -1.17
MSH6-209ENST00000538136 CST3P01034 146 aaPredicted RBP7.74□□□□□ -1.17
MSH6-209ENST00000538136 GTF2F1P35269 517 aaKnown RBP eCLIP7.74□□□□□ -1.172e-7■■■■■ 28.4
MSH6-209ENST00000538136 CYP4A22Q5TCH4 519 aa7.74□□□□□ -1.17
MSH6-209ENST00000538136 NETO2Q8NC67 525 aa7.74□□□□□ -1.17
MSH6-209ENST00000538136 LRRC15Q8TF66 581 aa7.74□□□□□ -1.17
MSH6-209ENST00000538136 SLC22A17Q8WUG5 538 aa7.74□□□□□ -1.17
MSH6-209ENST00000538136 ACSF2Q96CM8 615 aaPredicted RBP7.74□□□□□ -1.17
MSH6-209ENST00000538136 CXCL16Q9H2A7 254 aa7.74□□□□□ -1.17
MSH6-209ENST00000538136 TFR2Q9UP52 801 aa7.74□□□□□ -1.17
MSH6-209ENST00000538136 AP1G2O75843 785 aa7.73□□□□□ -1.17
MSH6-209ENST00000538136 ADRB2P07550 413 aa7.73□□□□□ -1.17
MSH6-209ENST00000538136 CCDC130P13994 396 aa7.73□□□□□ -1.17
MSH6-209ENST00000538136 PDE6CP51160 858 aa7.73□□□□□ -1.17
MSH6-209ENST00000538136 CES5AQ6NT32 575 aa7.73□□□□□ -1.17
MSH6-209ENST00000538136 TPGS1Q6ZTW0 290 aa7.73□□□□□ -1.17
MSH6-209ENST00000538136 FBXL16Q8N461 479 aa7.73□□□□□ -1.17
MSH6-209ENST00000538136 SLC7A14Q8TBB6 771 aa7.73□□□□□ -1.17
MSH6-209ENST00000538136 PDCD6IPQ8WUM4 868 aaKnown RBP7.73□□□□□ -1.17
MSH6-209ENST00000538136 HAUS1Q96CS2 278 aa7.73□□□□□ -1.17
MSH6-209ENST00000538136 NAP1L5Q96NT1 182 aaPredicted RBP7.73□□□□□ -1.17
MSH6-209ENST00000538136 KBTBD4Q9NVX7 518 aa7.73□□□□□ -1.17
MSH6-209ENST00000538136 SPG21Q9NZD8 308 aa7.73□□□□□ -1.17
MSH6-209ENST00000538136 SZT2Q5T011 3432 aa7.73□□□□□ -1.17
MSH6-209ENST00000538136 COL2A1P02458 1487 aaPredicted RBP7.73□□□□□ -1.17
MSH6-209ENST00000538136 CNTNAP2Q9UHC6 1331 aa7.73□□□□□ -1.17
MSH6-209ENST00000538136 NRP1O14786 923 aa7.73□□□□□ -1.17
MSH6-209ENST00000538136 GJB6O95452 261 aa7.73□□□□□ -1.17
MSH6-209ENST00000538136 ITGB1P05556 798 aa7.73□□□□□ -1.17
MSH6-209ENST00000538136 IGFBP6P24592 240 aaPredicted RBP7.73□□□□□ -1.17
MSH6-209ENST00000538136 MESDQ14696 234 aa7.73□□□□□ -1.17
MSH6-209ENST00000538136 KCNB1Q14721 858 aa7.73□□□□□ -1.17
MSH6-209ENST00000538136 DRAP1Q14919 205 aaPredicted RBP7.73□□□□□ -1.17
MSH6-209ENST00000538136 ANO4Q32M45 955 aa7.73□□□□□ -1.17
MSH6-209ENST00000538136 NT5DC1Q5TFE4 455 aa7.73□□□□□ -1.17
MSH6-209ENST00000538136 GUF1Q8N442 669 aaKnown RBP7.73□□□□□ -1.17
MSH6-209ENST00000538136 NAT16Q8N8M0 369 aa7.73□□□□□ -1.17
MSH6-209ENST00000538136 ACO2Q99798 780 aaKnown RBP7.73□□□□□ -1.17
MSH6-209ENST00000538136 ZNF576Q9H609 170 aa7.73□□□□□ -1.17
MSH6-209ENST00000538136 SMYD3Q9H7B4 428 aa7.73□□□□□ -1.17
MSH6-209ENST00000538136 METTL14Q9HCE5 456 aaKnown RBP7.73□□□□□ -1.17
MSH6-209ENST00000538136 KLHL11Q9NVR0 708 aa7.73□□□□□ -1.17
MSH6-209ENST00000538136 MIOSQ9NXC5 875 aa7.73□□□□□ -1.17
MSH6-209ENST00000538136 SEPT10Q9P0V9 454 aa7.73□□□□□ -1.17
MSH6-209ENST00000538136 MRPS23Q9Y3D9 190 aaKnown RBP7.73□□□□□ -1.17
MSH6-209ENST00000538136 WASP42768 502 aa7.73□□□□□ -1.17
MSH6-209ENST00000538136 CDC42EP1Q00587 391 aa7.73□□□□□ -1.17
MSH6-209ENST00000538136 SPIRE1Q08AE8 756 aa7.73□□□□□ -1.17
MSH6-209ENST00000538136 C10orf120Q5SQS8 335 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms