RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 ZNF844Q08AG5 666 aa9.94□□□□□ -0.82
UBE3B-207ENST00000537063 SCARA3Q6AZY7 606 aa9.94□□□□□ -0.82
UBE3B-207ENST00000537063 MPZL3Q6UWV2 235 aa9.94□□□□□ -0.82
UBE3B-207ENST00000537063 LEKR1Q6ZMV7 388 aa9.94□□□□□ -0.82
UBE3B-207ENST00000537063 EEPD1Q7L9B9 569 aa9.94□□□□□ -0.82
UBE3B-207ENST00000537063 ZBTB8OSQ8IWT0 167 aa9.94□□□□□ -0.82
UBE3B-207ENST00000537063 FBXO16Q8IX29 292 aaPredicted RBP9.94□□□□□ -0.82
UBE3B-207ENST00000537063 CPA5Q8WXQ8 436 aa9.94□□□□□ -0.82
UBE3B-207ENST00000537063 GLG1Q92896 1179 aa9.94□□□□□ -0.82
UBE3B-207ENST00000537063 CYFIP2Q96F07 1278 aa9.94□□□□□ -0.82
UBE3B-207ENST00000537063 DDX27Q96GQ7 796 aaKnown RBP9.94□□□□□ -0.82
UBE3B-207ENST00000537063 EPB41L4BQ9H329 900 aa9.94□□□□□ -0.82
UBE3B-207ENST00000537063 SMARCAD1Q9H4L7 1026 aa9.94□□□□□ -0.82
UBE3B-207ENST00000537063 ANAPC7Q9UJX3 599 aa9.94□□□□□ -0.82
UBE3B-207ENST00000537063 RALGAPA2Q2PPJ7 1873 aa9.93□□□□□ -0.82
UBE3B-207ENST00000537063 TCRBV5S1A1TA0A578 114 aa9.93□□□□□ -0.82
UBE3B-207ENST00000537063 RBM47A0AV96 593 aaKnown RBP9.93□□□□□ -0.82
UBE3B-207ENST00000537063 UNCXA6NJT0 531 aa9.93□□□□□ -0.82
UBE3B-207ENST00000537063 PROSCO94903 275 aa9.93□□□□□ -0.82
UBE3B-207ENST00000537063 IVLP07476 585 aa9.93□□□□□ -0.82
UBE3B-207ENST00000537063 RARAP10276 462 aa9.93□□□□□ -0.82
UBE3B-207ENST00000537063 MAPK4P31152 587 aa9.93□□□□□ -0.82
UBE3B-207ENST00000537063 COILP38432 576 aaPredicted RBP9.93□□□□□ -0.82
UBE3B-207ENST00000537063 MAPK6Q16659 721 aa9.93□□□□□ -0.82
UBE3B-207ENST00000537063 IFNLR1Q8IU57 520 aaPredicted RBP9.93□□□□□ -0.82
UBE3B-207ENST00000537063 SPATA33Q96N06 139 aa9.93□□□□□ -0.82
UBE3B-207ENST00000537063 PCDHB4Q9Y5E5 795 aa9.93□□□□□ -0.82
UBE3B-207ENST00000537063 ACKR2O00590 384 aa9.93□□□□□ -0.82
UBE3B-207ENST00000537063 HBP1O60381 514 aa9.93□□□□□ -0.82
UBE3B-207ENST00000537063 B4GALT4O60513 344 aa9.93□□□□□ -0.82
UBE3B-207ENST00000537063 C22orf31O95567 290 aa9.93□□□□□ -0.82
UBE3B-207ENST00000537063 LSM8O95777 96 aaKnown RBP9.93□□□□□ -0.82
UBE3B-207ENST00000537063 CDH5P33151 784 aaPredicted RBP9.93□□□□□ -0.82
UBE3B-207ENST00000537063 MBTD1Q05BQ5 628 aa9.93□□□□□ -0.82
UBE3B-207ENST00000537063 FAM187BQ17R55 369 aa9.93□□□□□ -0.82
UBE3B-207ENST00000537063 C9orf131Q5VYM1 1079 aa9.93□□□□□ -0.82
UBE3B-207ENST00000537063 TMEM270Q6UE05 265 aa9.93□□□□□ -0.82
UBE3B-207ENST00000537063 MAMDC4Q6UXC1 1216 aa9.93□□□□□ -0.82
UBE3B-207ENST00000537063 RNF149Q8NC42 400 aa9.93□□□□□ -0.82
UBE3B-207ENST00000537063 EMID1Q96A84 441 aaPredicted RBP9.93□□□□□ -0.82
UBE3B-207ENST00000537063 FMO2Q99518 471 aa9.93□□□□□ -0.82
UBE3B-207ENST00000537063 TRIM7Q9C029 511 aa9.93□□□□□ -0.82
UBE3B-207ENST00000537063 DPH5Q9H2P9 285 aa9.93□□□□□ -0.82
UBE3B-207ENST00000537063 SLC45A1Q9Y2W3 748 aa9.93□□□□□ -0.82
UBE3B-207ENST00000537063 UTRNP46939 3433 aa9.93□□□□□ -0.82
UBE3B-207ENST00000537063 ASB14A6NK59 587 aa9.93□□□□□ -0.82
UBE3B-207ENST00000537063 NOP56O00567 594 aaKnown RBP9.93□□□□□ -0.82
UBE3B-207ENST00000537063 PSTPIP1O43586 416 aa9.93□□□□□ -0.82
UBE3B-207ENST00000537063 NUDT17P0C025 328 aa9.93□□□□□ -0.82
UBE3B-207ENST00000537063 IRAK1P51617 712 aa9.93□□□□□ -0.82
UBE3B-207ENST00000537063 ARHGAP1Q07960 439 aa9.93□□□□□ -0.82
UBE3B-207ENST00000537063 MAMLD1Q13495 774 aa9.93□□□□□ -0.82
UBE3B-207ENST00000537063 SEZ6Q53EL9 994 aa9.93□□□□□ -0.82
UBE3B-207ENST00000537063 CCDC137Q6PK04 289 aaKnown RBP9.93□□□□□ -0.82
UBE3B-207ENST00000537063 ADAT2Q7Z6V5 191 aaKnown RBP9.93□□□□□ -0.82
UBE3B-207ENST00000537063 DHX37Q8IY37 1157 aaKnown RBP9.93□□□□□ -0.82
UBE3B-207ENST00000537063 MAGOHBQ96A72 148 aaKnown RBP9.93□□□□□ -0.82
UBE3B-207ENST00000537063 FAXDC2Q96IV6 333 aa9.93□□□□□ -0.82
UBE3B-207ENST00000537063 XYLT2Q9H1B5 865 aa9.93□□□□□ -0.82
UBE3B-207ENST00000537063 MTUS1Q9ULD2 1270 aa9.93□□□□□ -0.82
UBE3B-207ENST00000537063 MYO1FO00160 1098 aa9.92□□□□□ -0.82
UBE3B-207ENST00000537063 ASAP2O43150 1006 aa9.92□□□□□ -0.82
UBE3B-207ENST00000537063 CST3P01034 146 aaPredicted RBP9.92□□□□□ -0.82
UBE3B-207ENST00000537063 MARK3P27448 753 aa9.92□□□□□ -0.82
UBE3B-207ENST00000537063 EPHX2P34913 555 aa9.92□□□□□ -0.82
UBE3B-207ENST00000537063 RPL21P46778 160 aaKnown RBP9.92□□□□□ -0.82
UBE3B-207ENST00000537063 TFDP1Q14186 410 aa9.92□□□□□ -0.82
UBE3B-207ENST00000537063 ZNF792Q3KQV3 632 aa9.92□□□□□ -0.82
UBE3B-207ENST00000537063 AGBL2Q5U5Z8 902 aa9.92□□□□□ -0.82
UBE3B-207ENST00000537063 LRRC71Q8N4P6 559 aa9.92□□□□□ -0.82
UBE3B-207ENST00000537063 PLVAPQ9BX97 442 aa9.92□□□□□ -0.82
UBE3B-207ENST00000537063 CAPS2Q9BXY5 557 aa9.92□□□□□ -0.82
UBE3B-207ENST00000537063 MTMR12Q9C0I1 747 aa9.92□□□□□ -0.82
UBE3B-207ENST00000537063 NIF3L1Q9GZT8 377 aa9.92□□□□□ -0.82
UBE3B-207ENST00000537063 SCINQ9Y6U3 715 aa9.92□□□□□ -0.82
UBE3B-207ENST00000537063 EIF3HO15372 352 aaKnown RBP eCLIP9.92□□□□□ -0.82
UBE3B-207ENST00000537063 ZEB2O60315 1214 aa9.92□□□□□ -0.82
UBE3B-207ENST00000537063 MMP8P22894 467 aa9.92□□□□□ -0.82
UBE3B-207ENST00000537063 ASPAP45381 313 aa9.92□□□□□ -0.82
UBE3B-207ENST00000537063 KLF1Q13351 362 aaPredicted RBP9.92□□□□□ -0.82
UBE3B-207ENST00000537063 SNAPC2Q13487 334 aa9.92□□□□□ -0.82
UBE3B-207ENST00000537063 TTLL4Q14679 1199 aa9.92□□□□□ -0.82
UBE3B-207ENST00000537063 SGSM1Q2NKQ1 1148 aa9.92□□□□□ -0.82
UBE3B-207ENST00000537063 ZNF568Q3ZCX4 644 aa9.92□□□□□ -0.82
UBE3B-207ENST00000537063 LIN9Q5TKA1 542 aa9.92□□□□□ -0.82
UBE3B-207ENST00000537063 ARMC9Q7Z3E5 817 aa9.92□□□□□ -0.82
UBE3B-207ENST00000537063 KATNAL2Q8IYT4 538 aa9.92□□□□□ -0.82
UBE3B-207ENST00000537063 COPS5Q92905 334 aa9.92□□□□□ -0.82
UBE3B-207ENST00000537063 PARP2Q9UGN5 583 aa9.92□□□□□ -0.82
UBE3B-207ENST00000537063 PCDHGC3Q9UN70 934 aa9.92□□□□□ -0.82
UBE3B-207ENST00000537063 TNFSF13BQ9Y275 285 aa9.92□□□□□ -0.82
UBE3B-207ENST00000537063 SRRM3A6NNA2 597 aaPredicted RBP9.92□□□□□ -0.82
UBE3B-207ENST00000537063 TXNP10599 105 aaKnown RBP9.92□□□□□ -0.82
UBE3B-207ENST00000537063 DHX9Q08211 1270 aaKnown RBP9.92□□□□□ -0.82
UBE3B-207ENST00000537063 DUOXA2Q1HG44 320 aa9.92□□□□□ -0.82
UBE3B-207ENST00000537063 ZNF484Q5JVG2 852 aa9.92□□□□□ -0.82
UBE3B-207ENST00000537063 CEP85LQ5SZL2 805 aa9.92□□□□□ -0.82
UBE3B-207ENST00000537063 TMEM63BQ5T3F8 832 aa9.92□□□□□ -0.82
UBE3B-207ENST00000537063 ATF7IP2Q5U623 682 aa9.92□□□□□ -0.82
UBE3B-207ENST00000537063 TAPT1Q6NXT6 567 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms