RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 MYL1P05976 194 aa11.29□□□□□ -0.6
CSDE1-217ENST00000534699 ODC1P11926 461 aa11.29□□□□□ -0.6
CSDE1-217ENST00000534699 OR1D2P34982 312 aa11.29□□□□□ -0.6
CSDE1-217ENST00000534699 MATR3P43243 847 aaKnown RBP eCLIP11.29□□□□□ -0.6
CSDE1-217ENST00000534699 HTR4Q13639 388 aa11.29□□□□□ -0.6
CSDE1-217ENST00000534699 PRSS55Q6UWB4 352 aaPredicted RBP11.29□□□□□ -0.6
CSDE1-217ENST00000534699 PALB2Q86YC2 1186 aa11.29□□□□□ -0.6
CSDE1-217ENST00000534699 LINC00301Q8NCQ3 95 aa11.29□□□□□ -0.6
CSDE1-217ENST00000534699 TMEM174Q8WUU8 243 aa11.29□□□□□ -0.6
CSDE1-217ENST00000534699 DNASE1L2Q92874 299 aa11.29□□□□□ -0.6
CSDE1-217ENST00000534699 ZNF560Q96MR9 790 aa11.29□□□□□ -0.6
CSDE1-217ENST00000534699 TSC2P49815 1807 aa11.29□□□□□ -0.6
CSDE1-217ENST00000534699 LRG1P02750 347 aa11.29□□□□□ -0.6
CSDE1-217ENST00000534699 GLULP15104 373 aa11.29□□□□□ -0.6
CSDE1-217ENST00000534699 GBP2P32456 591 aaPredicted RBP11.29□□□□□ -0.6
CSDE1-217ENST00000534699 STAT6P42226 847 aa11.29□□□□□ -0.6
CSDE1-217ENST00000534699 STK38Q15208 465 aa11.29□□□□□ -0.6
CSDE1-217ENST00000534699 CEP57Q86XR8 500 aa11.29□□□□□ -0.6
CSDE1-217ENST00000534699 DNAJC19Q96DA6 116 aa11.29□□□□□ -0.6
CSDE1-217ENST00000534699 KIF12Q96FN5 646 aa11.29□□□□□ -0.6
CSDE1-217ENST00000534699 ZMAT2Q96NC0 199 aaKnown RBP11.29□□□□□ -0.6
CSDE1-217ENST00000534699 PAAF1Q9BRP4 392 aa11.29□□□□□ -0.6
CSDE1-217ENST00000534699 TRPV4Q9HBA0 871 aa11.29□□□□□ -0.6
CSDE1-217ENST00000534699 DOCK8Q8NF50 2099 aa11.28□□□□□ -0.6
CSDE1-217ENST00000534699 PIRO00625 290 aa11.28□□□□□ -0.6
CSDE1-217ENST00000534699 SPTLC2O15270 562 aa11.28□□□□□ -0.6
CSDE1-217ENST00000534699 TKTP29401 623 aaKnown RBP11.28□□□□□ -0.6
CSDE1-217ENST00000534699 MCM4P33991 863 aa11.28□□□□□ -0.6
CSDE1-217ENST00000534699 ROR1Q01973 937 aa11.28□□□□□ -0.6
CSDE1-217ENST00000534699 SOX4Q06945 474 aaPredicted RBP11.28□□□□□ -0.6
CSDE1-217ENST00000534699 TMEM132DQ14C87 1099 aa11.28□□□□□ -0.6
CSDE1-217ENST00000534699 ZRSR1Q15695 479 aaKnown RBP11.28□□□□□ -0.6
CSDE1-217ENST00000534699 CTXN3Q4LDR2 81 aa11.28□□□□□ -0.6
CSDE1-217ENST00000534699 METTL23Q86XA0 190 aa11.28□□□□□ -0.6
CSDE1-217ENST00000534699 IQUBQ8NA54 791 aa11.28□□□□□ -0.6
CSDE1-217ENST00000534699 APOL5Q9BWW9 433 aa11.28□□□□□ -0.6
CSDE1-217ENST00000534699 OBP2AQ9NY56 170 aa11.28□□□□□ -0.6
CSDE1-217ENST00000534699 ANKFY1Q9P2R3 1169 aa11.28□□□□□ -0.6
CSDE1-217ENST00000534699 FBXL5Q9UKA1 691 aa11.28□□□□□ -0.6
CSDE1-217ENST00000534699 AGO2Q9UKV8 859 aaKnown RBP11.28□□□□□ -0.6
CSDE1-217ENST00000534699 TTC28Q96AY4 2481 aa11.28□□□□□ -0.6
CSDE1-217ENST00000534699 TECTAO75443 2155 aa11.28□□□□□ -0.6
CSDE1-217ENST00000534699 SFI1A8K8P3 1242 aa11.28□□□□□ -0.6
CSDE1-217ENST00000534699 LACTBL1A8MY62 500 aa11.28□□□□□ -0.6
CSDE1-217ENST00000534699 AOC1P19801 751 aa11.28□□□□□ -0.6
CSDE1-217ENST00000534699 YWHAHQ04917 246 aaPredicted RBP11.28□□□□□ -0.6
CSDE1-217ENST00000534699 GPR17Q13304 367 aa11.28□□□□□ -0.6
CSDE1-217ENST00000534699 ENOX2Q16206 610 aaKnown RBP11.28□□□□□ -0.6
CSDE1-217ENST00000534699 SV2CQ496J9 727 aa11.28□□□□□ -0.6
CSDE1-217ENST00000534699 USP37Q86T82 979 aa11.28□□□□□ -0.6
CSDE1-217ENST00000534699 LRRC52Q8N7C0 313 aa11.28□□□□□ -0.6
CSDE1-217ENST00000534699 KIAA1958Q8N8K9 716 aa11.28□□□□□ -0.6
CSDE1-217ENST00000534699 ELSPBP1Q96BH3 223 aa11.28□□□□□ -0.6
CSDE1-217ENST00000534699 ZBTB45Q96K62 511 aaPredicted RBP11.28□□□□□ -0.6
CSDE1-217ENST00000534699 MYADMQ96S97 322 aa11.28□□□□□ -0.6
CSDE1-217ENST00000534699 TSHZ2Q9NRE2 1034 aa11.28□□□□□ -0.6
CSDE1-217ENST00000534699 KBTBD4Q9NVX7 518 aa11.28□□□□□ -0.6
CSDE1-217ENST00000534699 CDY1Q9Y6F8 540 aa11.28□□□□□ -0.6
CSDE1-217ENST00000534699 NUP210Q8TEM1 1887 aaPredicted RBP11.28□□□□□ -0.6
CSDE1-217ENST00000534699 PVALEFA0A1B0GWK0 134 aa11.27□□□□□ -0.6
CSDE1-217ENST00000534699 STARD6P59095 220 aa11.27□□□□□ -0.6
CSDE1-217ENST00000534699 ITIH5Q86UX2 942 aa11.27□□□□□ -0.6
CSDE1-217ENST00000534699 THEM5Q8N1Q8 247 aa11.27□□□□□ -0.6
CSDE1-217ENST00000534699 TMEM86AQ8N2M4 240 aa11.27□□□□□ -0.6
CSDE1-217ENST00000534699 SLC44A3Q8N4M1 653 aa11.27□□□□□ -0.6
CSDE1-217ENST00000534699 CEP120Q8N960 986 aa11.27□□□□□ -0.6
CSDE1-217ENST00000534699 DEPDC1BQ8WUY9 529 aa11.27□□□□□ -0.6
CSDE1-217ENST00000534699 LEO1Q8WVC0 666 aaPredicted RBP11.27□□□□□ -0.6
CSDE1-217ENST00000534699 C7orf25Q9BPX7 421 aa11.27□□□□□ -0.6
CSDE1-217ENST00000534699 TCHHQ07283 1943 aa11.27□□□□□ -0.61
CSDE1-217ENST00000534699 PRPF40AO75400 957 aaKnown RBP11.27□□□□□ -0.61
CSDE1-217ENST00000534699 CXCL8P10145 99 aa11.27□□□□□ -0.61
CSDE1-217ENST00000534699 NHLH1Q02575 133 aa11.27□□□□□ -0.61
CSDE1-217ENST00000534699 ENPEPQ07075 957 aa11.27□□□□□ -0.61
CSDE1-217ENST00000534699 PABPC1LQ4VXU2 614 aaKnown RBP11.27□□□□□ -0.61
CSDE1-217ENST00000534699 IQCEQ6IPM2 695 aa11.27□□□□□ -0.61
CSDE1-217ENST00000534699 DPH6Q7L8W6 267 aa11.27□□□□□ -0.61
CSDE1-217ENST00000534699 BRSK2Q8IWQ3 736 aa11.27□□□□□ -0.61
CSDE1-217ENST00000534699 USP28Q96RU2 1077 aa11.27□□□□□ -0.61
CSDE1-217ENST00000534699 FAM13BQ9NYF5 915 aa11.27□□□□□ -0.61
CSDE1-217ENST00000534699 ZNF318Q5VUA4 2279 aa11.26□□□□□ -0.61
CSDE1-217ENST00000534699 F8W810 466 aa11.26□□□□□ -0.61
CSDE1-217ENST00000534699 EXTL3O43909 919 aa11.26□□□□□ -0.61
CSDE1-217ENST00000534699 ZSCAN22P10073 491 aaPredicted RBP11.26□□□□□ -0.61
CSDE1-217ENST00000534699 TUFMP49411 452 aaKnown RBP11.26□□□□□ -0.61
CSDE1-217ENST00000534699 TAF6P49848 677 aa11.26□□□□□ -0.61
CSDE1-217ENST00000534699 GLRA4Q5JXX5 417 aa11.26□□□□□ -0.61
CSDE1-217ENST00000534699 CYP4A22Q5TCH4 519 aa11.26□□□□□ -0.61
CSDE1-217ENST00000534699 DSTYKQ6XUX3 929 aa11.26□□□□□ -0.61
CSDE1-217ENST00000534699 MAMSTRQ6ZN01 415 aa11.26□□□□□ -0.61
CSDE1-217ENST00000534699 C12orf56Q8IXR9 622 aa11.26□□□□□ -0.61
CSDE1-217ENST00000534699 CCDC105Q8IYK2 499 aa11.26□□□□□ -0.61
CSDE1-217ENST00000534699 C3orf58Q8NDZ4 430 aa11.26□□□□□ -0.61
CSDE1-217ENST00000534699 GOLGA5Q8TBA6 731 aa11.26□□□□□ -0.61
CSDE1-217ENST00000534699 SLC7A14Q8TBB6 771 aa11.26□□□□□ -0.61
CSDE1-217ENST00000534699 ZNF512Q96ME7 567 aaPredicted RBP11.26□□□□□ -0.61
CSDE1-217ENST00000534699 MFSD1Q9H3U5 465 aa11.26□□□□□ -0.61
CSDE1-217ENST00000534699 MRPL44Q9H9J2 332 aaKnown RBP11.26□□□□□ -0.61
CSDE1-217ENST00000534699 ITGA11Q9UKX5 1188 aa11.26□□□□□ -0.61
CSDE1-217ENST00000534699 INSL5Q9Y5Q6 135 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms