RNA–Protein interactions for RNA: ENST00000529998.5

UBASH3B-205, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

TSL 4

Gene UBASH3B, Length 698 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-205ENST00000529998 TMEM174Q8WUU8 243 aa9.4□□□□□ -0.9
UBASH3B-205ENST00000529998 RIN2Q8WYP3 895 aaPredicted RBP9.4□□□□□ -0.9
UBASH3B-205ENST00000529998 PPP2R3CQ969Q6 453 aa9.4□□□□□ -0.9
UBASH3B-205ENST00000529998 PABPC5Q96DU9 382 aaKnown RBP9.4□□□□□ -0.9
UBASH3B-205ENST00000529998 MFSD14AQ96MC6 490 aa9.4□□□□□ -0.9
UBASH3B-205ENST00000529998 KLHL5Q96PQ7 755 aa9.4□□□□□ -0.9
UBASH3B-205ENST00000529998 POP1Q99575 1024 aaKnown RBP9.4□□□□□ -0.9
UBASH3B-205ENST00000529998 GZF1Q9H116 711 aaPredicted RBP9.4□□□□□ -0.9
UBASH3B-205ENST00000529998 MRPL17Q9NRX2 175 aaKnown RBP9.4□□□□□ -0.9
UBASH3B-205ENST00000529998 CLDND1Q9NY35 253 aa9.4□□□□□ -0.9
UBASH3B-205ENST00000529998 KIAA1468Q9P260 1216 aa9.4□□□□□ -0.9
UBASH3B-205ENST00000529998 STK39Q9UEW8 545 aa9.4□□□□□ -0.9
UBASH3B-205ENST00000529998 PPP1R3GB7ZBB8 358 aa9.39□□□□□ -0.91
UBASH3B-205ENST00000529998 SPTLC1O15269 473 aa9.39□□□□□ -0.91
UBASH3B-205ENST00000529998 TEX28O15482 410 aa9.39□□□□□ -0.91
UBASH3B-205ENST00000529998 TRAPPC3O43617 180 aa9.39□□□□□ -0.91
UBASH3B-205ENST00000529998 TBX10O75333 385 aa9.39□□□□□ -0.91
UBASH3B-205ENST00000529998 RPL17P18621 184 aaKnown RBP9.39□□□□□ -0.91
UBASH3B-205ENST00000529998 TKTP29401 623 aaKnown RBP9.39□□□□□ -0.91
UBASH3B-205ENST00000529998 MCM4P33991 863 aa9.39□□□□□ -0.91
UBASH3B-205ENST00000529998 PMS1P54277 932 aaKnown RBP9.39□□□□□ -0.91
UBASH3B-205ENST00000529998 LILRA4P59901 499 aa9.39□□□□□ -0.91
UBASH3B-205ENST00000529998 ELAVL2Q12926 359 aaKnown RBP9.39□□□□□ -0.91
UBASH3B-205ENST00000529998 MYBPC2Q14324 1141 aa9.39□□□□□ -0.91
UBASH3B-205ENST00000529998 PSMD6Q15008 389 aa9.39□□□□□ -0.91
UBASH3B-205ENST00000529998 NFIL3Q16649 462 aa9.39□□□□□ -0.91
UBASH3B-205ENST00000529998 ANKRD40Q6AI12 368 aa9.39□□□□□ -0.91
UBASH3B-205ENST00000529998 CENPPQ6IPU0 288 aa9.39□□□□□ -0.91
UBASH3B-205ENST00000529998 LLGL2Q6P1M3 1020 aa9.39□□□□□ -0.91
UBASH3B-205ENST00000529998 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.39□□□□□ -0.91
UBASH3B-205ENST00000529998 EP400NLQ6ZTU2 488 aa9.39□□□□□ -0.91
UBASH3B-205ENST00000529998 NT5DC4Q86YG4 428 aa9.39□□□□□ -0.91
UBASH3B-205ENST00000529998 C1orf127Q8N9H9 656 aa9.39□□□□□ -0.91
UBASH3B-205ENST00000529998 CXorf38Q8TB03 319 aa9.39□□□□□ -0.91
UBASH3B-205ENST00000529998 LNX1Q8TBB1 728 aaPredicted RBP9.39□□□□□ -0.91
UBASH3B-205ENST00000529998 SLC22A17Q8WUG5 538 aa9.39□□□□□ -0.91
UBASH3B-205ENST00000529998 CACTINQ8WUQ7 758 aaKnown RBP9.39□□□□□ -0.91
UBASH3B-205ENST00000529998 ZNF516Q92618 1163 aa9.39□□□□□ -0.91
UBASH3B-205ENST00000529998 HLA-CQ95604 372 aa9.39□□□□□ -0.91
UBASH3B-205ENST00000529998 CCDC127Q96BQ5 260 aa9.39□□□□□ -0.91
UBASH3B-205ENST00000529998 EEF2KMTQ96G04 330 aa9.39□□□□□ -0.91
UBASH3B-205ENST00000529998 SUSD3Q96L08 255 aa9.39□□□□□ -0.91
UBASH3B-205ENST00000529998 CDCA3Q99618 268 aaPredicted RBP9.39□□□□□ -0.91
UBASH3B-205ENST00000529998 TTPALQ9BTX7 342 aa9.39□□□□□ -0.91
UBASH3B-205ENST00000529998 CLSTN2Q9H4D0 955 aa9.39□□□□□ -0.91
UBASH3B-205ENST00000529998 UBE2ZQ9H832 354 aaPredicted RBP9.39□□□□□ -0.91
UBASH3B-205ENST00000529998 RXFP1Q9HBX9 757 aa9.39□□□□□ -0.91
UBASH3B-205ENST00000529998 INTS13Q9NVM9 706 aa9.39□□□□□ -0.91
UBASH3B-205ENST00000529998 CLEC1BQ9P126 229 aa9.39□□□□□ -0.91
UBASH3B-205ENST00000529998 COG5Q9UP83 839 aa9.39□□□□□ -0.91
UBASH3B-205ENST00000529998 NUB1Q9Y5A7 615 aa9.39□□□□□ -0.91
UBASH3B-205ENST00000529998 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.39□□□□□ -0.91
UBASH3B-205ENST00000529998 TSC2P49815 1807 aa9.39□□□□□ -0.91
UBASH3B-205ENST00000529998 TCF20Q9UGU0 1960 aaKnown RBP9.39□□□□□ -0.91
UBASH3B-205ENST00000529998 C5orf42Q9H799 3197 aa9.38□□□□□ -0.91
UBASH3B-205ENST00000529998 TRIM49BA6NDI0 452 aa9.38□□□□□ -0.91
UBASH3B-205ENST00000529998 GOLGA6L22H0YM25 854 aa9.38□□□□□ -0.91
UBASH3B-205ENST00000529998 H3BQ06 376 aaPredicted RBP9.38□□□□□ -0.91
UBASH3B-205ENST00000529998 M0QZQ0 153 aa9.38□□□□□ -0.91
UBASH3B-205ENST00000529998 ADAM12O43184 909 aa9.38□□□□□ -0.91
UBASH3B-205ENST00000529998 NCK2O43639 380 aa9.38□□□□□ -0.91
UBASH3B-205ENST00000529998 AKAP3O75969 853 aa9.38□□□□□ -0.91
UBASH3B-205ENST00000529998 ITGB3P05106 788 aa9.38□□□□□ -0.91
UBASH3B-205ENST00000529998 DLATP10515 647 aaKnown RBP9.38□□□□□ -0.91
UBASH3B-205ENST00000529998 EPCAMP16422 314 aa9.38□□□□□ -0.91
UBASH3B-205ENST00000529998 KCNA5P22460 613 aa9.38□□□□□ -0.91
UBASH3B-205ENST00000529998 NR2F2P24468 414 aa9.38□□□□□ -0.91
UBASH3B-205ENST00000529998 KLRC2P26717 231 aa9.38□□□□□ -0.91
UBASH3B-205ENST00000529998 POLR2BP30876 1174 aaKnown RBP9.38□□□□□ -0.91
UBASH3B-205ENST00000529998 AARSP49588 968 aaKnown RBP eCLIP9.38□□□□□ -0.91
UBASH3B-205ENST00000529998 DLG4P78352 724 aa9.38□□□□□ -0.91
UBASH3B-205ENST00000529998 ADAM9Q13443 819 aa9.38□□□□□ -0.91
UBASH3B-205ENST00000529998 SURF1Q15526 300 aa9.38□□□□□ -0.91
UBASH3B-205ENST00000529998 PSMD5Q16401 504 aa9.38□□□□□ -0.91
UBASH3B-205ENST00000529998 CEP135Q66GS9 1140 aa9.38□□□□□ -0.91
UBASH3B-205ENST00000529998 RSPO2Q6UXX9 243 aaPredicted RBP9.38□□□□□ -0.91
UBASH3B-205ENST00000529998 TMEM184AQ6ZMB5 413 aa9.38□□□□□ -0.91
UBASH3B-205ENST00000529998 WDR49Q8IV35 697 aa9.38□□□□□ -0.91
UBASH3B-205ENST00000529998 GLYCTKQ8IVS8 523 aa9.38□□□□□ -0.91
UBASH3B-205ENST00000529998 GPR65Q8IYL9 337 aa9.38□□□□□ -0.91
UBASH3B-205ENST00000529998 CSGALNACT2Q8N6G5 542 aa9.38□□□□□ -0.91
UBASH3B-205ENST00000529998 PARD3BQ8TEW8 1205 aa9.38□□□□□ -0.91
UBASH3B-205ENST00000529998 PIK3R5Q8WYR1 880 aa9.38□□□□□ -0.91
UBASH3B-205ENST00000529998 BORCS6Q96GS4 357 aa9.38□□□□□ -0.91
UBASH3B-205ENST00000529998 CGRRF1Q99675 332 aa9.38□□□□□ -0.91
UBASH3B-205ENST00000529998 CLSTN3Q9BQT9 956 aa9.38□□□□□ -0.91
UBASH3B-205ENST00000529998 EMILIN2Q9BXX0 1053 aa9.38□□□□□ -0.91
UBASH3B-205ENST00000529998 GTPBP4Q9BZE4 634 aaKnown RBP9.38□□□□□ -0.91
UBASH3B-205ENST00000529998 MTMR12Q9C0I1 747 aa9.38□□□□□ -0.91
UBASH3B-205ENST00000529998 NUP62CLQ9H1M0 184 aa9.38□□□□□ -0.91
UBASH3B-205ENST00000529998 FNIP2Q9P278 1114 aa9.38□□□□□ -0.91
UBASH3B-205ENST00000529998 THEGQ9P2T0 379 aa9.38□□□□□ -0.91
UBASH3B-205ENST00000529998 SIX4Q9UIU6 781 aa9.38□□□□□ -0.91
UBASH3B-205ENST00000529998 BARX2Q9UMQ3 279 aaPredicted RBP9.38□□□□□ -0.91
UBASH3B-205ENST00000529998 AGAP1Q9UPQ3 857 aa9.38□□□□□ -0.91
UBASH3B-205ENST00000529998 SSX2IPQ9Y2D8 614 aa9.38□□□□□ -0.91
UBASH3B-205ENST00000529998 TIMM13Q9Y5L4 95 aaPredicted RBP9.38□□□□□ -0.91
UBASH3B-205ENST00000529998 HCFC2Q9Y5Z7 792 aa9.38□□□□□ -0.91
UBASH3B-205ENST00000529998 LRRIQ3A6PVS8 624 aaPredicted RBP9.37□□□□□ -0.91
UBASH3B-205ENST00000529998 SYN3O14994 580 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms