RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 MINDY4Q4G0A6 757 aa5.96□□□□□ -1.46
CTR9-204ENST00000529355 CCDC93Q567U6 631 aa5.96□□□□□ -1.46
CTR9-204ENST00000529355 NPNTQ6UXI9 565 aa5.96□□□□□ -1.46
CTR9-204ENST00000529355 GDF7Q7Z4P5 450 aa5.96□□□□□ -1.46
CTR9-204ENST00000529355 OR56A1Q8NGH5 318 aa5.96□□□□□ -1.46
CTR9-204ENST00000529355 CACTINQ8WUQ7 758 aaKnown RBP5.96□□□□□ -1.46
CTR9-204ENST00000529355 SLC35A4Q96G79 324 aa5.96□□□□□ -1.46
CTR9-204ENST00000529355 KLHL32Q96NJ5 620 aa5.96□□□□□ -1.46
CTR9-204ENST00000529355 VKORC1Q9BQB6 163 aa5.96□□□□□ -1.46
CTR9-204ENST00000529355 B3GNT5Q9BYG0 378 aa5.96□□□□□ -1.46
CTR9-204ENST00000529355 MRPL46Q9H2W6 279 aaKnown RBP5.96□□□□□ -1.46
CTR9-204ENST00000529355 KLHL11Q9NVR0 708 aa5.96□□□□□ -1.46
CTR9-204ENST00000529355 PNPOQ9NVS9 261 aa5.96□□□□□ -1.46
CTR9-204ENST00000529355 OBP2AQ9NY56 170 aa5.96□□□□□ -1.46
CTR9-204ENST00000529355 FAM30AQ9NZY2 134 aa5.96□□□□□ -1.46
CTR9-204ENST00000529355 PCDHA6Q9UN73 950 aa5.96□□□□□ -1.46
CTR9-204ENST00000529355 AGAP1Q9UPQ3 857 aa5.96□□□□□ -1.46
CTR9-204ENST00000529355 POLHQ9Y253 713 aa5.96□□□□□ -1.46
CTR9-204ENST00000529355 STXBP5LQ9Y2K9 1186 aa5.96□□□□□ -1.46
CTR9-204ENST00000529355 C1QTNF3-AMACRE9PGA6 284 aa5.95□□□□□ -1.46
CTR9-204ENST00000529355 H3BML4 177 aa5.95□□□□□ -1.46
CTR9-204ENST00000529355 MATN3O15232 486 aa5.95□□□□□ -1.46
CTR9-204ENST00000529355 LPXNO60711 386 aa5.95□□□□□ -1.46
CTR9-204ENST00000529355 ZFPL1O95159 310 aa5.95□□□□□ -1.46
CTR9-204ENST00000529355 MATN4O95460 622 aa5.95□□□□□ -1.46
CTR9-204ENST00000529355 RPLP2P05387 115 aaKnown RBP5.95□□□□□ -1.46
CTR9-204ENST00000529355 MTHFD1P11586 935 aaKnown RBP5.95□□□□□ -1.46
CTR9-204ENST00000529355 PSMC1P62191 440 aaKnown RBP5.95□□□□□ -1.46
CTR9-204ENST00000529355 EXOSC9Q06265 439 aaKnown RBP5.95□□□□□ -1.46
CTR9-204ENST00000529355 FOXE3Q13461 319 aa5.95□□□□□ -1.46
CTR9-204ENST00000529355 PUM1Q14671 1186 aaKnown RBP eCLIP5.95□□□□□ -1.46
CTR9-204ENST00000529355 FITM2Q8N6M3 262 aa5.95□□□□□ -1.46
CTR9-204ENST00000529355 TNPO1Q92973 898 aaKnown RBP5.95□□□□□ -1.46
CTR9-204ENST00000529355 LRIG1Q96JA1 1093 aa5.95□□□□□ -1.46
CTR9-204ENST00000529355 ZNF703Q9H7S9 590 aaPredicted RBP5.95□□□□□ -1.46
CTR9-204ENST00000529355 KMT5AQ9NQR1 393 aa5.95□□□□□ -1.46
CTR9-204ENST00000529355 GPRC5BQ9NZH0 403 aa5.95□□□□□ -1.46
CTR9-204ENST00000529355 CPA4Q9UI42 421 aa5.95□□□□□ -1.46
CTR9-204ENST00000529355 HAUS5O94927 633 aa5.94□□□□□ -1.46
CTR9-204ENST00000529355 CKBP12277 381 aa5.94□□□□□ -1.46
CTR9-204ENST00000529355 FGFR4P22455 802 aa5.94□□□□□ -1.46
CTR9-204ENST00000529355 GCSHP23434 173 aa5.94□□□□□ -1.46
CTR9-204ENST00000529355 MGAT1P26572 445 aa5.94□□□□□ -1.46
CTR9-204ENST00000529355 USP14P54578 494 aa5.94□□□□□ -1.46
CTR9-204ENST00000529355 RAB1AP62820 205 aa5.94□□□□□ -1.46
CTR9-204ENST00000529355 HSD11B2P80365 405 aa5.94□□□□□ -1.46
CTR9-204ENST00000529355 OCA2Q04671 838 aa5.94□□□□□ -1.46
CTR9-204ENST00000529355 RHOT2Q8IXI1 618 aa5.94□□□□□ -1.46
CTR9-204ENST00000529355 SLC17A8Q8NDX2 589 aa5.94□□□□□ -1.46
CTR9-204ENST00000529355 ZNF747Q9BV97 191 aa5.94□□□□□ -1.46
CTR9-204ENST00000529355 PACSIN1Q9BY11 444 aa5.94□□□□□ -1.46
CTR9-204ENST00000529355 ZMAT3Q9HA38 289 aaKnown RBP5.94□□□□□ -1.46
CTR9-204ENST00000529355 ATP6V0A4Q9HBG4 840 aa5.94□□□□□ -1.46
CTR9-204ENST00000529355 JKAMPQ9P055 326 aa5.94□□□□□ -1.46
CTR9-204ENST00000529355 CLCA2Q9UQC9 943 aa5.94□□□□□ -1.46
CTR9-204ENST00000529355 SLC16A6O15403 523 aa5.93□□□□□ -1.46
CTR9-204ENST00000529355 NDUFA10O95299 355 aa5.93□□□□□ -1.46
CTR9-204ENST00000529355 GJB1P08034 283 aa5.93□□□□□ -1.46
CTR9-204ENST00000529355 CRB2Q5IJ48 1285 aa5.93□□□□□ -1.46
CTR9-204ENST00000529355 THEMIS2Q5TEJ8 643 aa5.93□□□□□ -1.46
CTR9-204ENST00000529355 B3GNTL1Q67FW5 361 aaPredicted RBP5.93□□□□□ -1.46
CTR9-204ENST00000529355 CYB5RLQ6IPT4 315 aa5.93□□□□□ -1.46
CTR9-204ENST00000529355 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.93□□□□□ -1.46
CTR9-204ENST00000529355 ZNF365Q70YC5 407 aa5.93□□□□□ -1.46
CTR9-204ENST00000529355 ZNF276Q8N554 614 aa5.93□□□□□ -1.46
CTR9-204ENST00000529355 FBXO41Q8TF61 875 aa5.93□□□□□ -1.46
CTR9-204ENST00000529355 CDK5RAP3Q96JB5 506 aa5.93□□□□□ -1.46
CTR9-204ENST00000529355 IMPG2Q9BZV3 1241 aa5.93□□□□□ -1.46
CTR9-204ENST00000529355 AKIP1Q9NQ31 210 aa5.93□□□□□ -1.46
CTR9-204ENST00000529355 PARPBPQ9NWS1 579 aa5.93□□□□□ -1.46
CTR9-204ENST00000529355 FRMPD2Q68DX3 1309 aaPredicted RBP5.93□□□□□ -1.46
CTR9-204ENST00000529355 A0A088AWK7 358 aa5.92□□□□□ -1.46
CTR9-204ENST00000529355 A0A1B0GTW7 788 aa5.92□□□□□ -1.46
CTR9-204ENST00000529355 UNC119BA6NIH7 251 aa5.92□□□□□ -1.46
CTR9-204ENST00000529355 ZNF785A8K8V0 405 aa5.92□□□□□ -1.46
CTR9-204ENST00000529355 NPIPB8E9PQR5 432 aa5.92□□□□□ -1.46
CTR9-204ENST00000529355 TRIM24O15164 1050 aa5.92□□□□□ -1.46
CTR9-204ENST00000529355 KITP10721 976 aa5.92□□□□□ -1.46
CTR9-204ENST00000529355 ALAS1P13196 640 aa5.92□□□□□ -1.46
CTR9-204ENST00000529355 PIK3CGP48736 1102 aa5.92□□□□□ -1.46
CTR9-204ENST00000529355 AGFG1P52594 562 aaKnown RBP5.92□□□□□ -1.46
CTR9-204ENST00000529355 GFOD2Q3B7J2 385 aa5.92□□□□□ -1.46
CTR9-204ENST00000529355 MIIPQ5JXC2 388 aa5.92□□□□□ -1.46
CTR9-204ENST00000529355 MAPKAPK5Q8IW41 473 aa5.92□□□□□ -1.46
CTR9-204ENST00000529355 KIAA0319LQ8IZA0 1049 aa5.92□□□□□ -1.46
CTR9-204ENST00000529355 Q8N1X5 172 aa5.92□□□□□ -1.46
CTR9-204ENST00000529355 Q8NA96 180 aa5.92□□□□□ -1.46
CTR9-204ENST00000529355 PCSK9Q8NBP7 692 aaKnown RBP5.92□□□□□ -1.46
CTR9-204ENST00000529355 PDPRQ8NCN5 879 aa5.92□□□□□ -1.46
CTR9-204ENST00000529355 FAM156AQ8NDB6 213 aa5.92□□□□□ -1.46
CTR9-204ENST00000529355 NLGN4YQ8NFZ3 816 aaPredicted RBP5.92□□□□□ -1.46
CTR9-204ENST00000529355 ZNF483Q8TF39 744 aaPredicted RBP5.92□□□□□ -1.46
CTR9-204ENST00000529355 NACC2Q96BF6 587 aa5.92□□□□□ -1.46
CTR9-204ENST00000529355 MRGPRX1Q96LB2 322 aa5.92□□□□□ -1.46
CTR9-204ENST00000529355 FAM193BQ96PV7 902 aaPredicted RBP5.92□□□□□ -1.46
CTR9-204ENST00000529355 DCLRE1CQ96SD1 692 aaKnown RBP5.92□□□□□ -1.46
CTR9-204ENST00000529355 ADAM2Q99965 735 aa5.92□□□□□ -1.46
CTR9-204ENST00000529355 MLST8Q9BVC4 326 aa5.92□□□□□ -1.46
CTR9-204ENST00000529355 BRD9Q9H8M2 597 aa5.92□□□□□ -1.46
CTR9-204ENST00000529355 MAN1C1Q9NR34 630 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms