RNA–Protein interactions for RNA: ENST00000523540.1

PCM1-219, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-219ENST00000523540 SMARCA1P28370 1054 aa5.91□□□□□ -1.46
PCM1-219ENST00000523540 PRDX5P30044 214 aa5.91□□□□□ -1.46
PCM1-219ENST00000523540 AGFG1P52594 562 aaKnown RBP5.91□□□□□ -1.46
PCM1-219ENST00000523540 NHLH2Q02577 135 aa5.91□□□□□ -1.46
PCM1-219ENST00000523540 GBX1Q14549 363 aa5.91□□□□□ -1.46
PCM1-219ENST00000523540 PLS1Q14651 629 aa5.91□□□□□ -1.46
PCM1-219ENST00000523540 AMER2Q8N7J2 671 aa5.91□□□□□ -1.46
PCM1-219ENST00000523540 WDCPQ9H6R7 721 aa5.91□□□□□ -1.46
PCM1-219ENST00000523540 PNPOQ9NVS9 261 aa5.91□□□□□ -1.46
PCM1-219ENST00000523540 JKAMPQ9P055 326 aa5.91□□□□□ -1.46
PCM1-219ENST00000523540 CHST2Q9Y4C5 530 aa5.91□□□□□ -1.46
PCM1-219ENST00000523540 A0A088AWK7 358 aa5.9□□□□□ -1.46
PCM1-219ENST00000523540 PRSS29PA6NIE9 313 aa5.9□□□□□ -1.46
PCM1-219ENST00000523540 A6NNZ2 444 aa5.9□□□□□ -1.46
PCM1-219ENST00000523540 RECQL4O94761 1208 aa5.9□□□□□ -1.46
PCM1-219ENST00000523540 GRM3Q14832 879 aa5.9□□□□□ -1.46
PCM1-219ENST00000523540 RABL3Q5HYI8 236 aa5.9□□□□□ -1.46
PCM1-219ENST00000523540 AGAP9Q5VTM2 703 aa5.9□□□□□ -1.46
PCM1-219ENST00000523540 FITM2Q8N6M3 262 aa5.9□□□□□ -1.46
PCM1-219ENST00000523540 C1orf43Q9BWL3 253 aa5.9□□□□□ -1.46
PCM1-219ENST00000523540 SLC46A2Q9BY10 475 aa5.9□□□□□ -1.46
PCM1-219ENST00000523540 TMEM60Q9H2L4 133 aa5.9□□□□□ -1.46
PCM1-219ENST00000523540 MRPL46Q9H2W6 279 aaKnown RBP5.9□□□□□ -1.46
PCM1-219ENST00000523540 SORCS3Q9UPU3 1222 aa5.9□□□□□ -1.46
PCM1-219ENST00000523540 AHRRA9YTQ3 701 aa5.89□□□□□ -1.47
PCM1-219ENST00000523540 H3BUI4 141 aa5.89□□□□□ -1.47
PCM1-219ENST00000523540 ZNF185O15231 689 aa5.89□□□□□ -1.47
PCM1-219ENST00000523540 HAUS5O94927 633 aa5.89□□□□□ -1.47
PCM1-219ENST00000523540 ITGB1P05556 798 aa5.89□□□□□ -1.47
PCM1-219ENST00000523540 GCSHP23434 173 aa5.89□□□□□ -1.47
PCM1-219ENST00000523540 RNASE9P60153 205 aaKnown RBP5.89□□□□□ -1.47
PCM1-219ENST00000523540 PURAQ00577 322 aaKnown RBP5.89□□□□□ -1.47
PCM1-219ENST00000523540 NRN1LQ496H8 165 aa5.89□□□□□ -1.47
PCM1-219ENST00000523540 CCDC157Q569K6 752 aa5.89□□□□□ -1.47
PCM1-219ENST00000523540 CYB5RLQ6IPT4 315 aa5.89□□□□□ -1.47
PCM1-219ENST00000523540 ARMC6Q6NXE6 501 aa5.89□□□□□ -1.47
PCM1-219ENST00000523540 NPNTQ6UXI9 565 aa5.89□□□□□ -1.47
PCM1-219ENST00000523540 ZNF365Q70YC5 407 aa5.89□□□□□ -1.47
PCM1-219ENST00000523540 CHST15Q7LFX5 561 aaPredicted RBP5.89□□□□□ -1.47
PCM1-219ENST00000523540 PPP1R3BQ86XI6 285 aa5.89□□□□□ -1.47
PCM1-219ENST00000523540 RHOT2Q8IXI1 618 aa5.89□□□□□ -1.47
PCM1-219ENST00000523540 SH2D3CQ8N5H7 860 aa5.89□□□□□ -1.47
PCM1-219ENST00000523540 LENG9Q96B70 501 aa5.89□□□□□ -1.47
PCM1-219ENST00000523540 SLC35A4Q96G79 324 aa5.89□□□□□ -1.47
PCM1-219ENST00000523540 PHACTR3Q96KR7 559 aa5.89□□□□□ -1.47
PCM1-219ENST00000523540 PACSIN1Q9BY11 444 aa5.89□□□□□ -1.47
PCM1-219ENST00000523540 FEZ2Q9UHY8 353 aaPredicted RBP5.89□□□□□ -1.47
PCM1-219ENST00000523540 EIF2B4Q9UI10 523 aaKnown RBP5.89□□□□□ -1.47
PCM1-219ENST00000523540 SLC45A2Q9UMX9 530 aa5.89□□□□□ -1.47
PCM1-219ENST00000523540 CDHR4A6H8M9 788 aa5.88□□□□□ -1.47
PCM1-219ENST00000523540 CKBP12277 381 aa5.88□□□□□ -1.47
PCM1-219ENST00000523540 TGM1P22735 817 aa5.88□□□□□ -1.47
PCM1-219ENST00000523540 PTGS2P35354 604 aa5.88□□□□□ -1.47
PCM1-219ENST00000523540 USP14P54578 494 aa5.88□□□□□ -1.47
PCM1-219ENST00000523540 RAB1AP62820 205 aa5.88□□□□□ -1.47
PCM1-219ENST00000523540 NOMO3P69849 1222 aa5.88□□□□□ -1.47
PCM1-219ENST00000523540 SLC25A3Q00325 362 aa5.88□□□□□ -1.47
PCM1-219ENST00000523540 TUBA3CQ13748 450 aa5.88□□□□□ -1.47
PCM1-219ENST00000523540 GALEQ14376 348 aa5.88□□□□□ -1.47
PCM1-219ENST00000523540 ANO6Q4KMQ2 910 aa5.88□□□□□ -1.47
PCM1-219ENST00000523540 PDCD4Q53EL6 469 aaKnown RBP5.88□□□□□ -1.47
PCM1-219ENST00000523540 CCDC93Q567U6 631 aa5.88□□□□□ -1.47
PCM1-219ENST00000523540 NOMO2Q5JPE7 1267 aa5.88□□□□□ -1.47
PCM1-219ENST00000523540 UTP14CQ5TAP6 766 aaKnown RBP5.88□□□□□ -1.47
PCM1-219ENST00000523540 TUBA3EQ6PEY2 450 aa5.88□□□□□ -1.47
PCM1-219ENST00000523540 DGKHQ86XP1 1220 aa5.88□□□□□ -1.47
PCM1-219ENST00000523540 KIAA0319LQ8IZA0 1049 aa5.88□□□□□ -1.47
PCM1-219ENST00000523540 TEX101Q9BY14 249 aa5.88□□□□□ -1.47
PCM1-219ENST00000523540 B3GNT5Q9BYG0 378 aa5.88□□□□□ -1.47
PCM1-219ENST00000523540 ARMT1Q9H993 441 aa5.88□□□□□ -1.47
PCM1-219ENST00000523540 PRDM11Q9NQV5 511 aa5.88□□□□□ -1.47
PCM1-219ENST00000523540 GNL3LQ9NVN8 582 aaKnown RBP5.88□□□□□ -1.47
PCM1-219ENST00000523540 GEMIN8Q9NWZ8 242 aaKnown RBP5.88□□□□□ -1.47
PCM1-219ENST00000523540 PCDHA1Q9Y5I3 950 aa5.88□□□□□ -1.47
PCM1-219ENST00000523540 KIF3BO15066 747 aa5.87□□□□□ -1.47
PCM1-219ENST00000523540 SCAF4O95104 1147 aaKnown RBP5.87□□□□□ -1.47
PCM1-219ENST00000523540 MATN4O95460 622 aa5.87□□□□□ -1.47
PCM1-219ENST00000523540 C1SP09871 688 aa5.87□□□□□ -1.47
PCM1-219ENST00000523540 PIK3CGP48736 1102 aa5.87□□□□□ -1.47
PCM1-219ENST00000523540 SLFN5Q08AF3 891 aa5.87□□□□□ -1.47
PCM1-219ENST00000523540 LLGL1Q15334 1064 aa5.87□□□□□ -1.47
PCM1-219ENST00000523540 HSP90AB2PQ58FF8 381 aa5.87□□□□□ -1.47
PCM1-219ENST00000523540 TSHZ3Q63HK5 1081 aa5.87□□□□□ -1.47
PCM1-219ENST00000523540 RHOUQ7L0Q8 258 aa5.87□□□□□ -1.47
PCM1-219ENST00000523540 GDF7Q7Z4P5 450 aa5.87□□□□□ -1.47
PCM1-219ENST00000523540 DAAM2Q86T65 1068 aa5.87□□□□□ -1.47
PCM1-219ENST00000523540 TBC1D15Q8TC07 691 aa5.87□□□□□ -1.47
PCM1-219ENST00000523540 CPT1CQ8TCG5 803 aa5.87□□□□□ -1.47
PCM1-219ENST00000523540 NUP133Q8WUM0 1156 aa5.87□□□□□ -1.47
PCM1-219ENST00000523540 ZNF768Q9H5H4 540 aaKnown RBP5.87□□□□□ -1.47
PCM1-219ENST00000523540 KLHL11Q9NVR0 708 aa5.87□□□□□ -1.47
PCM1-219ENST00000523540 L1RE1Q9UN81 338 aa5.87□□□□□ -1.47
PCM1-219ENST00000523540 USP15Q9Y4E8 981 aaPredicted RBP5.87□□□□□ -1.47
PCM1-219ENST00000523540 FRMPD2Q68DX3 1309 aaPredicted RBP5.86□□□□□ -1.47
PCM1-219ENST00000523540 CCDC78A2IDD5 438 aa5.86□□□□□ -1.47
PCM1-219ENST00000523540 FAM227AF5H4B4 570 aa5.86□□□□□ -1.47
PCM1-219ENST00000523540 FAM20BO75063 409 aa5.86□□□□□ -1.47
PCM1-219ENST00000523540 AGFG2O95081 481 aa5.86□□□□□ -1.47
PCM1-219ENST00000523540 AHSGP02765 367 aa5.86□□□□□ -1.47
PCM1-219ENST00000523540 HRGP04196 525 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms