RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 TPRP12270 2363 aaKnown RBP28.36■■■□□ 2.13
PVT1-219ENST00000523427 SFI1A8K8P3 1242 aa28.36■■■□□ 2.13
PVT1-219ENST00000523427 HIP1RO75146 1068 aa28.36■■■□□ 2.13
PVT1-219ENST00000523427 VITQ6UXI7 678 aa28.36■■■□□ 2.13
PVT1-219ENST00000523427 TAS1R3Q7RTX0 852 aa28.36■■■□□ 2.13
PVT1-219ENST00000523427 SMARCD2Q92925 531 aa28.36■■■□□ 2.13
PVT1-219ENST00000523427 IRF7Q92985 503 aa28.36■■■□□ 2.13
PVT1-219ENST00000523427 CNTNAP3BQ96NU0 1288 aa28.36■■■□□ 2.13
PVT1-219ENST00000523427 CNTNAP3Q9BZ76 1288 aa28.36■■■□□ 2.13
PVT1-219ENST00000523427 ZNF334Q9HCZ1 680 aaPredicted RBP28.36■■■□□ 2.13
PVT1-219ENST00000523427 CEP72Q9P209 647 aa28.36■■■□□ 2.13
PVT1-219ENST00000523427 PIAS3Q9Y6X2 628 aa28.36■■■□□ 2.13
PVT1-219ENST00000523427 DCDC2BA2VCK2 349 aa28.35■■■□□ 2.13
PVT1-219ENST00000523427 MCF2P10911 925 aa28.35■■■□□ 2.13
PVT1-219ENST00000523427 CPB1P15086 417 aa28.35■■■□□ 2.13
PVT1-219ENST00000523427 KCNE1P15382 129 aa28.35■■■□□ 2.13
PVT1-219ENST00000523427 RPL9P32969 192 aaKnown RBP28.35■■■□□ 2.13
PVT1-219ENST00000523427 FXR2P51116 673 aaKnown RBP eCLIP28.35■■■□□ 2.13
PVT1-219ENST00000523427 LMNB2Q03252 620 aa28.35■■■□□ 2.13
PVT1-219ENST00000523427 ORC2Q13416 577 aaPredicted RBP28.35■■■□□ 2.13
PVT1-219ENST00000523427 MRPL58Q14197 206 aaKnown RBP28.35■■■□□ 2.13
PVT1-219ENST00000523427 TPGS2Q68CL5 300 aa28.35■■■□□ 2.13
PVT1-219ENST00000523427 ZNF280DQ6N043 979 aa28.35■■■□□ 2.13
PVT1-219ENST00000523427 GPIHBP1Q8IV16 184 aa28.35■■■□□ 2.13
PVT1-219ENST00000523427 DAW1Q8N136 415 aa28.35■■■□□ 2.13
PVT1-219ENST00000523427 TMEM130Q8N3G9 435 aa28.35■■■□□ 2.13
PVT1-219ENST00000523427 TBC1D32Q96NH3 1257 aa28.35■■■□□ 2.13
PVT1-219ENST00000523427 RUSC1Q9BVN2 902 aa28.35■■■□□ 2.13
PVT1-219ENST00000523427 CHRDQ9H2X0 955 aa28.35■■■□□ 2.13
PVT1-219ENST00000523427 FOXP1Q9H334 677 aaPredicted RBP28.35■■■□□ 2.13
PVT1-219ENST00000523427 SLITRK6Q9H5Y7 841 aa28.35■■■□□ 2.13
PVT1-219ENST00000523427 TMEM134Q9H6X4 195 aa28.35■■■□□ 2.13
PVT1-219ENST00000523427 ANKFY1Q9P2R3 1169 aa28.35■■■□□ 2.13
PVT1-219ENST00000523427 RAB23Q9ULC3 237 aa28.35■■■□□ 2.13
PVT1-219ENST00000523427 DNM3Q9UQ16 869 aa28.35■■■□□ 2.13
PVT1-219ENST00000523427 PP2D1A8MPX8 630 aa28.34■■■□□ 2.13
PVT1-219ENST00000523427 SLC16A4O15374 487 aa28.34■■■□□ 2.13
PVT1-219ENST00000523427 PSMC3P17980 439 aa28.34■■■□□ 2.13
PVT1-219ENST00000523427 SDHBP21912 280 aa28.34■■■□□ 2.13
PVT1-219ENST00000523427 MARCKSP29966 332 aaPredicted RBP28.34■■■□□ 2.13
PVT1-219ENST00000523427 ZRSR1Q15695 479 aaKnown RBP28.34■■■□□ 2.13
PVT1-219ENST00000523427 PRR23BQ6ZRT6 265 aa28.34■■■□□ 2.13
PVT1-219ENST00000523427 C4orf32Q8N8J7 132 aa28.34■■■□□ 2.13
PVT1-219ENST00000523427 ZSCAN18Q8TBC5 510 aaPredicted RBP28.34■■■□□ 2.13
PVT1-219ENST00000523427 PARD6AQ9NPB6 346 aa28.34■■■□□ 2.13
PVT1-219ENST00000523427 NOL7Q9UMY1 257 aaKnown RBP28.34■■■□□ 2.13
PVT1-219ENST00000523427 MOSPD3O75425 235 aa28.33■■■□□ 2.13
PVT1-219ENST00000523427 CDC25AP30304 524 aa28.33■■■□□ 2.13
PVT1-219ENST00000523427 SPAG1Q07617 926 aa28.33■■■□□ 2.13
PVT1-219ENST00000523427 SPEM2Q0P670 501 aa28.33■■■□□ 2.13
PVT1-219ENST00000523427 TEAD2Q15562 447 aa28.33■■■□□ 2.13
PVT1-219ENST00000523427 MPZL3Q6UWV2 235 aa28.33■■■□□ 2.13
PVT1-219ENST00000523427 RNF19BQ6ZMZ0 732 aa28.33■■■□□ 2.13
PVT1-219ENST00000523427 APPL2Q8NEU8 664 aa28.33■■■□□ 2.13
PVT1-219ENST00000523427 DDX12PQ92771 950 aa28.33■■■□□ 2.13
PVT1-219ENST00000523427 SUSD3Q96L08 255 aa28.33■■■□□ 2.13
PVT1-219ENST00000523427 FAM126AQ9BYI3 521 aaPredicted RBP28.33■■■□□ 2.13
PVT1-219ENST00000523427 ASAH2Q9NR71 780 aa28.33■■■□□ 2.13
PVT1-219ENST00000523427 CNTN3Q9P232 1028 aa28.33■■■□□ 2.13
PVT1-219ENST00000523427 TUBGCP4Q9UGJ1 667 aa28.33■■■□□ 2.13
PVT1-219ENST00000523427 AFF4Q9UHB7 1163 aaKnown RBP28.33■■■□□ 2.13
PVT1-219ENST00000523427 PRR5-ARHGAP8B1AHC4 643 aa28.32■■■□□ 2.12
PVT1-219ENST00000523427 ZNF263O14978 683 aa28.32■■■□□ 2.12
PVT1-219ENST00000523427 MEFVO15553 781 aaPredicted RBP28.32■■■□□ 2.12
PVT1-219ENST00000523427 CCNE1P24864 410 aa28.32■■■□□ 2.12
PVT1-219ENST00000523427 ARHGAP8P85298 464 aa28.32■■■□□ 2.12
PVT1-219ENST00000523427 RAD51AP2Q09MP3 1159 aa28.32■■■□□ 2.12
PVT1-219ENST00000523427 MAP4K3Q8IVH8 894 aa28.32■■■□□ 2.12
PVT1-219ENST00000523427 ZNF687Q8N1G0 1237 aa28.32■■■□□ 2.12
PVT1-219ENST00000523427 ARHGAP28Q9P2N2 729 aa28.32■■■□□ 2.12
PVT1-219ENST00000523427 TIMM13Q9Y5L4 95 aaPredicted RBP28.32■■■□□ 2.12
PVT1-219ENST00000523427 CACNA1BQ00975 2339 aa28.32■■■□□ 2.12
PVT1-219ENST00000523427 MICAL2O94851 1124 aa28.31■■■□□ 2.12
PVT1-219ENST00000523427 OR4Q2P0C623 313 aa28.31■■■□□ 2.12
PVT1-219ENST00000523427 MATR3P43243 847 aaKnown RBP eCLIP28.31■■■□□ 2.124e-7■□□□□ 10.6
PVT1-219ENST00000523427 PTGDRQ13258 359 aa28.31■■■□□ 2.12
PVT1-219ENST00000523427 PPP2R5DQ14738 602 aa28.31■■■□□ 2.12
PVT1-219ENST00000523427 DRC1Q96MC2 740 aa28.31■■■□□ 2.12
PVT1-219ENST00000523427 PGLYRP2Q96PD5 576 aa28.31■■■□□ 2.12
PVT1-219ENST00000523427 DAXXQ9UER7 740 aaPredicted RBP28.31■■■□□ 2.12
PVT1-219ENST00000523427 RBM19Q9Y4C8 960 aaKnown RBP28.31■■■□□ 2.12
PVT1-219ENST00000523427 EPG5Q9HCE0 2579 aa28.3■■■□□ 2.12
PVT1-219ENST00000523427 HEPACAM2A8MVW5 462 aa28.3■■■□□ 2.12
PVT1-219ENST00000523427 ABLIM1O14639 778 aa28.3■■■□□ 2.12
PVT1-219ENST00000523427 TGM1P22735 817 aa28.3■■■□□ 2.12
PVT1-219ENST00000523427 PROZP22891 400 aa28.3■■■□□ 2.12
PVT1-219ENST00000523427 NRLP54845 237 aa28.3■■■□□ 2.12
PVT1-219ENST00000523427 SATB1Q01826 763 aa28.3■■■□□ 2.12
PVT1-219ENST00000523427 STRN3Q13033 797 aa28.3■■■□□ 2.12
PVT1-219ENST00000523427 SLC10A6Q3KNW5 377 aa28.3■■■□□ 2.12
PVT1-219ENST00000523427 RINT1Q6NUQ1 792 aa28.3■■■□□ 2.12
PVT1-219ENST00000523427 YAF2Q8IY57 180 aa28.3■■■□□ 2.12
PVT1-219ENST00000523427 FAM184AQ8NB25 1140 aa28.3■■■□□ 2.12
PVT1-219ENST00000523427 FBXO18Q8NFZ0 1043 aa28.3■■■□□ 2.12
PVT1-219ENST00000523427 DEPDC1BQ8WUY9 529 aa28.3■■■□□ 2.12
PVT1-219ENST00000523427 RAB34Q9BZG1 259 aa28.3■■■□□ 2.12
PVT1-219ENST00000523427 NCANO14594 1321 aa28.29■■■□□ 2.12
PVT1-219ENST00000523427 TDGF1P13385 188 aa28.29■■■□□ 2.12
PVT1-219ENST00000523427 CCR3P51677 355 aa28.29■■■□□ 2.12
PVT1-219ENST00000523427 MAPK7Q13164 816 aa28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms