RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 AOPEPQ8N6M6 819 aa4.19□□□□□ -1.74
HMGB1P41-201ENST00000520234 DCBLD1Q8N8Z6 715 aa4.19□□□□□ -1.74
HMGB1P41-201ENST00000520234 ZBTB34Q8NCN2 500 aa4.19□□□□□ -1.74
HMGB1P41-201ENST00000520234 RNF169Q8NCN4 708 aa4.19□□□□□ -1.74
HMGB1P41-201ENST00000520234 ACO2Q99798 780 aaKnown RBP4.19□□□□□ -1.74
HMGB1P41-201ENST00000520234 RLIMQ9NVW2 624 aa4.19□□□□□ -1.74
HMGB1P41-201ENST00000520234 JKAMPQ9P055 326 aa4.19□□□□□ -1.74
HMGB1P41-201ENST00000520234 FEZ2Q9UHY8 353 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P41-201ENST00000520234 EIF2B4Q9UI10 523 aaKnown RBP4.19□□□□□ -1.74
HMGB1P41-201ENST00000520234 PCDHA3Q9Y5H8 950 aa4.19□□□□□ -1.74
HMGB1P41-201ENST00000520234 NR2E3Q9Y5X4 410 aa4.19□□□□□ -1.74
HMGB1P41-201ENST00000520234 A0A088AWK7 358 aa4.18□□□□□ -1.74
HMGB1P41-201ENST00000520234 LRRC14BA6NHZ5 514 aa4.18□□□□□ -1.74
HMGB1P41-201ENST00000520234 VSTM5A8MXK1 200 aa4.18□□□□□ -1.74
HMGB1P41-201ENST00000520234 NT5C1B-RDH14C9J2C7 533 aa4.18□□□□□ -1.74
HMGB1P41-201ENST00000520234 NPIPB8E9PQR5 432 aa4.18□□□□□ -1.74
HMGB1P41-201ENST00000520234 F2RL2O00254 374 aa4.18□□□□□ -1.74
HMGB1P41-201ENST00000520234 B3GALT2O43825 422 aa4.18□□□□□ -1.74
HMGB1P41-201ENST00000520234 PEX11BO96011 259 aa4.18□□□□□ -1.74
HMGB1P41-201ENST00000520234 GNAI3P08754 354 aa4.18□□□□□ -1.74
HMGB1P41-201ENST00000520234 SPATA31D3P0C874 917 aa4.18□□□□□ -1.74
HMGB1P41-201ENST00000520234 HTR1BP28222 390 aa4.18□□□□□ -1.74
HMGB1P41-201ENST00000520234 PRDX5P30044 214 aa4.18□□□□□ -1.74
HMGB1P41-201ENST00000520234 CHN2P52757 468 aa4.18□□□□□ -1.74
HMGB1P41-201ENST00000520234 GNAI1P63096 354 aa4.18□□□□□ -1.74
HMGB1P41-201ENST00000520234 NKX6-1P78426 367 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P41-201ENST00000520234 GPSM2P81274 684 aa4.18□□□□□ -1.74
HMGB1P41-201ENST00000520234 NHLH2Q02577 135 aa4.18□□□□□ -1.74
HMGB1P41-201ENST00000520234 TOB2Q14106 344 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P41-201ENST00000520234 FLYWCH1Q4VC44 716 aa4.18□□□□□ -1.74
HMGB1P41-201ENST00000520234 RABL3Q5HYI8 236 aa4.18□□□□□ -1.74
HMGB1P41-201ENST00000520234 FAM102AQ5T9C2 384 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P41-201ENST00000520234 DPY19L2P1Q6NXN4 242 aa4.18□□□□□ -1.74
HMGB1P41-201ENST00000520234 SPATA31D4Q6ZUB0 917 aa4.18□□□□□ -1.74
HMGB1P41-201ENST00000520234 MED25Q71SY5 747 aa4.18□□□□□ -1.74
HMGB1P41-201ENST00000520234 BHLHA9Q7RTU4 235 aa4.18□□□□□ -1.74
HMGB1P41-201ENST00000520234 UBE3BQ7Z3V4 1068 aa4.18□□□□□ -1.74
HMGB1P41-201ENST00000520234 SRGAP1Q7Z6B7 1085 aa4.18□□□□□ -1.74
HMGB1P41-201ENST00000520234 DAAM2Q86T65 1068 aa4.18□□□□□ -1.74
HMGB1P41-201ENST00000520234 PDSS2Q86YH6 399 aa4.18□□□□□ -1.74
HMGB1P41-201ENST00000520234 SYT12Q8IV01 421 aa4.18□□□□□ -1.74
HMGB1P41-201ENST00000520234 C1orf210Q8IVY1 113 aa4.18□□□□□ -1.74
HMGB1P41-201ENST00000520234 RHOT2Q8IXI1 618 aa4.18□□□□□ -1.74
HMGB1P41-201ENST00000520234 KLHDC4Q8TBB5 520 aa4.18□□□□□ -1.74
HMGB1P41-201ENST00000520234 PGBD4Q96DM1 585 aa4.18□□□□□ -1.74
HMGB1P41-201ENST00000520234 TMEM60Q9H2L4 133 aa4.18□□□□□ -1.74
HMGB1P41-201ENST00000520234 GSTO2Q9H4Y5 243 aa4.18□□□□□ -1.74
HMGB1P41-201ENST00000520234 PNPOQ9NVS9 261 aa4.18□□□□□ -1.74
HMGB1P41-201ENST00000520234 FBXO34Q9NWN3 711 aa4.18□□□□□ -1.74
HMGB1P41-201ENST00000520234 OBP2AQ9NY56 170 aa4.18□□□□□ -1.74
HMGB1P41-201ENST00000520234 CFAP97Q9P2B7 532 aa4.18□□□□□ -1.74
HMGB1P41-201ENST00000520234 GABBR1Q9UBS5 961 aa4.18□□□□□ -1.74
HMGB1P41-201ENST00000520234 ABCF2Q9UG63 623 aa4.18□□□□□ -1.74
HMGB1P41-201ENST00000520234 ZDHHC8Q9ULC8 765 aa4.18□□□□□ -1.74
HMGB1P41-201ENST00000520234 GAGE12BA1L429 117 aa4.17□□□□□ -1.74
HMGB1P41-201ENST00000520234 GAGE12HA6NDE8 117 aa4.17□□□□□ -1.74
HMGB1P41-201ENST00000520234 GRXCR1A8MXD5 290 aa4.17□□□□□ -1.74
HMGB1P41-201ENST00000520234 FAM227AF5H4B4 570 aa4.17□□□□□ -1.74
HMGB1P41-201ENST00000520234 H3BUI4 141 aa4.17□□□□□ -1.74
HMGB1P41-201ENST00000520234 LEFTY2O00292 366 aa4.17□□□□□ -1.74
HMGB1P41-201ENST00000520234 PPFIA4O75335 1185 aa4.17□□□□□ -1.74
HMGB1P41-201ENST00000520234 HRGP04196 525 aa4.17□□□□□ -1.74
HMGB1P41-201ENST00000520234 CKBP12277 381 aa4.17□□□□□ -1.74
HMGB1P41-201ENST00000520234 GCSHP23434 173 aa4.17□□□□□ -1.74
HMGB1P41-201ENST00000520234 APOBEC3AP31941 199 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P41-201ENST00000520234 PIK3CGP48736 1102 aa4.17□□□□□ -1.74
HMGB1P41-201ENST00000520234 AGFG1P52594 562 aaKnown RBP4.17□□□□□ -1.74
HMGB1P41-201ENST00000520234 FGL2Q14314 439 aa4.17□□□□□ -1.74
HMGB1P41-201ENST00000520234 NRN1LQ496H8 165 aa4.17□□□□□ -1.74
HMGB1P41-201ENST00000520234 ANO6Q4KMQ2 910 aa4.17□□□□□ -1.74
HMGB1P41-201ENST00000520234 USP39Q53GS9 565 aaKnown RBP4.17□□□□□ -1.74
HMGB1P41-201ENST00000520234 SPDYAQ5MJ70 313 aa4.17□□□□□ -1.74
HMGB1P41-201ENST00000520234 AGAP9Q5VTM2 703 aa4.17□□□□□ -1.74
HMGB1P41-201ENST00000520234 RNF207Q6ZRF8 634 aa4.17□□□□□ -1.74
HMGB1P41-201ENST00000520234 ZNF365Q70YC5 407 aa4.17□□□□□ -1.74
HMGB1P41-201ENST00000520234 CHST15Q7LFX5 561 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P41-201ENST00000520234 OVCH2Q7RTZ1 564 aa4.17□□□□□ -1.74
HMGB1P41-201ENST00000520234 DGKHQ86XP1 1220 aa4.17□□□□□ -1.74
HMGB1P41-201ENST00000520234 FAM90A1Q86YD7 464 aa4.17□□□□□ -1.74
HMGB1P41-201ENST00000520234 IL17DQ8TAD2 202 aa4.17□□□□□ -1.74
HMGB1P41-201ENST00000520234 NUP133Q8WUM0 1156 aa4.17□□□□□ -1.74
HMGB1P41-201ENST00000520234 EXTL1Q92935 676 aa4.17□□□□□ -1.74
HMGB1P41-201ENST00000520234 SLC35A4Q96G79 324 aa4.17□□□□□ -1.74
HMGB1P41-201ENST00000520234 SLC46A2Q9BY10 475 aa4.17□□□□□ -1.74
HMGB1P41-201ENST00000520234 BRD9Q9H8M2 597 aa4.17□□□□□ -1.74
HMGB1P41-201ENST00000520234 SORCS3Q9UPU3 1222 aa4.17□□□□□ -1.74
HMGB1P41-201ENST00000520234 ATP11BQ9Y2G3 1177 aa4.17□□□□□ -1.74
HMGB1P41-201ENST00000520234 CAPN8A6NHC0 703 aa4.16□□□□□ -1.74
HMGB1P41-201ENST00000520234 RNASET2O00584 256 aaKnown RBP4.16□□□□□ -1.74
HMGB1P41-201ENST00000520234 PLSCR1O15162 318 aa4.16□□□□□ -1.74
HMGB1P41-201ENST00000520234 SCAF4O95104 1147 aaKnown RBP4.16□□□□□ -1.74
HMGB1P41-201ENST00000520234 ITGB1P05556 798 aa4.16□□□□□ -1.74
HMGB1P41-201ENST00000520234 SBK3P0C264 359 aa4.16□□□□□ -1.74
HMGB1P41-201ENST00000520234 RNASE9P60153 205 aaKnown RBP4.16□□□□□ -1.74
HMGB1P41-201ENST00000520234 KRTAP10-11P60412 298 aa4.16□□□□□ -1.74
HMGB1P41-201ENST00000520234 PLS1Q14651 629 aa4.16□□□□□ -1.74
HMGB1P41-201ENST00000520234 KRTAP15-1Q3LI76 137 aa4.16□□□□□ -1.74
HMGB1P41-201ENST00000520234 CCDC93Q567U6 631 aa4.16□□□□□ -1.74
HMGB1P41-201ENST00000520234 EMC10Q5UCC4 262 aa4.16□□□□□ -1.74
HMGB1P41-201ENST00000520234 METRNLQ641Q3 311 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms