RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 PRKD1Q15139 912 aaPredicted RBP5.63□□□□□ -1.51
SQLE-202ENST00000518604 COBLL1Q53SF7 1204 aa5.63□□□□□ -1.51
SQLE-202ENST00000518604 KHDC1LQ5JSQ8 128 aa5.63□□□□□ -1.51
SQLE-202ENST00000518604 C1QL3Q5VWW1 255 aa5.63□□□□□ -1.51
SQLE-202ENST00000518604 LRTOMTQ8WZ04 291 aa5.63□□□□□ -1.51
SQLE-202ENST00000518604 ANKS1AQ92625 1134 aa5.63□□□□□ -1.51
SQLE-202ENST00000518604 DDX17Q92841 729 aaKnown RBP5.63□□□□□ -1.51
SQLE-202ENST00000518604 CDK5RAP1Q96SZ6 601 aaKnown RBP5.63□□□□□ -1.51
SQLE-202ENST00000518604 ZNF700Q9H0M5 742 aa5.63□□□□□ -1.51
SQLE-202ENST00000518604 FBXO34Q9NWN3 711 aa5.63□□□□□ -1.51
SQLE-202ENST00000518604 TPCN1Q9ULQ1 816 aa5.63□□□□□ -1.51
SQLE-202ENST00000518604 TESMINQ9Y4I5 508 aa5.63□□□□□ -1.51
SQLE-202ENST00000518604 XDHP47989 1333 aa5.63□□□□□ -1.51
SQLE-202ENST00000518604 ISM1B1AKI9 464 aa5.62□□□□□ -1.51
SQLE-202ENST00000518604 GJB1P08034 283 aa5.62□□□□□ -1.51
SQLE-202ENST00000518604 SLC6A4P31645 630 aa5.62□□□□□ -1.51
SQLE-202ENST00000518604 HDAC1Q13547 482 aaPredicted RBP5.62□□□□□ -1.51
SQLE-202ENST00000518604 MAP9Q49MG5 647 aa5.62□□□□□ -1.51
SQLE-202ENST00000518604 MED25Q71SY5 747 aa5.62□□□□□ -1.51
SQLE-202ENST00000518604 PPP1R3BQ86XI6 285 aa5.62□□□□□ -1.51
SQLE-202ENST00000518604 KRT78Q8N1N4 520 aa5.62□□□□□ -1.51
SQLE-202ENST00000518604 RNF169Q8NCN4 708 aa5.62□□□□□ -1.51
SQLE-202ENST00000518604 NUP133Q8WUM0 1156 aa5.62□□□□□ -1.51
SQLE-202ENST00000518604 TNPO1Q92973 898 aaKnown RBP5.62□□□□□ -1.51
SQLE-202ENST00000518604 SCAMP4Q969E2 229 aa5.62□□□□□ -1.51
SQLE-202ENST00000518604 SUCLG2Q96I99 432 aa5.62□□□□□ -1.51
SQLE-202ENST00000518604 ADOQ96SZ5 270 aa5.62□□□□□ -1.51
SQLE-202ENST00000518604 LRRC27Q9C0I9 530 aa5.62□□□□□ -1.51
SQLE-202ENST00000518604 SIK2Q9H0K1 926 aa5.62□□□□□ -1.51
SQLE-202ENST00000518604 NUP62CLQ9H1M0 184 aa5.62□□□□□ -1.51
SQLE-202ENST00000518604 RSAD1Q9HA92 442 aa5.62□□□□□ -1.51
SQLE-202ENST00000518604 GPR35Q9HC97 309 aa5.62□□□□□ -1.51
SQLE-202ENST00000518604 SMPD4Q9NXE4 827 aa5.62□□□□□ -1.51
SQLE-202ENST00000518604 PRSS29PA6NIE9 313 aa5.61□□□□□ -1.51
SQLE-202ENST00000518604 TRIM24O15164 1050 aa5.61□□□□□ -1.51
SQLE-202ENST00000518604 FOXD2O60548 495 aaPredicted RBP5.61□□□□□ -1.51
SQLE-202ENST00000518604 RECQL4O94761 1208 aa5.61□□□□□ -1.51
SQLE-202ENST00000518604 MATN4O95460 622 aa5.61□□□□□ -1.51
SQLE-202ENST00000518604 CHEK2O96017 543 aa5.61□□□□□ -1.51
SQLE-202ENST00000518604 THP07101 528 aa5.61□□□□□ -1.51
SQLE-202ENST00000518604 NBPF7P0C2Y1 421 aaPredicted RBP5.61□□□□□ -1.51
SQLE-202ENST00000518604 RARBP10826 455 aa5.61□□□□□ -1.51
SQLE-202ENST00000518604 CKBP12277 381 aa5.61□□□□□ -1.51
SQLE-202ENST00000518604 GCSHP23434 173 aa5.61□□□□□ -1.51
SQLE-202ENST00000518604 ACRV1P26436 265 aa5.61□□□□□ -1.51
SQLE-202ENST00000518604 SCNN1GP51170 649 aa5.61□□□□□ -1.51
SQLE-202ENST00000518604 CHN2P52757 468 aa5.61□□□□□ -1.51
SQLE-202ENST00000518604 CRHR2Q13324 411 aa5.61□□□□□ -1.51
SQLE-202ENST00000518604 UTP14CQ5TAP6 766 aaKnown RBP5.61□□□□□ -1.51
SQLE-202ENST00000518604 SWSAP1Q6NVH7 229 aa5.61□□□□□ -1.51
SQLE-202ENST00000518604 Q6ZRM9 215 aa5.61□□□□□ -1.51
SQLE-202ENST00000518604 RHOT2Q8IXI1 618 aa5.61□□□□□ -1.51
SQLE-202ENST00000518604 IL31RAQ8NI17 732 aa5.61□□□□□ -1.51
SQLE-202ENST00000518604 KBTBD7Q8WVZ9 684 aa5.61□□□□□ -1.51
SQLE-202ENST00000518604 APIPQ96GX9 242 aa5.61□□□□□ -1.51
SQLE-202ENST00000518604 MRGPRX1Q96LB2 322 aa5.61□□□□□ -1.51
SQLE-202ENST00000518604 C1orf43Q9BWL3 253 aa5.61□□□□□ -1.51
SQLE-202ENST00000518604 C22orf23Q9BZE7 217 aa5.61□□□□□ -1.51
SQLE-202ENST00000518604 KLC2Q9H0B6 622 aa5.61□□□□□ -1.51
SQLE-202ENST00000518604 BHMT2Q9H2M3 363 aa5.61□□□□□ -1.51
SQLE-202ENST00000518604 ZMAT3Q9HA38 289 aaKnown RBP5.61□□□□□ -1.51
SQLE-202ENST00000518604 ATP6V0A4Q9HBG4 840 aa5.61□□□□□ -1.51
SQLE-202ENST00000518604 ST6GALNAC2Q9UJ37 374 aa5.61□□□□□ -1.51
SQLE-202ENST00000518604 PCDHA6Q9UN73 950 aa5.61□□□□□ -1.51
SQLE-202ENST00000518604 PAXBP1Q9Y5B6 917 aa5.61□□□□□ -1.51
SQLE-202ENST00000518604 FOXN3O00409 490 aaPredicted RBP5.6□□□□□ -1.51
SQLE-202ENST00000518604 MUSKO15146 869 aa5.6□□□□□ -1.51
SQLE-202ENST00000518604 GNAI2P04899 355 aa5.6□□□□□ -1.51
SQLE-202ENST00000518604 SPATA31D3P0C874 917 aa5.6□□□□□ -1.51
SQLE-202ENST00000518604 MYF5P13349 255 aa5.6□□□□□ -1.51
SQLE-202ENST00000518604 PEX2P28328 305 aa5.6□□□□□ -1.51
SQLE-202ENST00000518604 MAGEA10P43363 369 aaPredicted RBP5.6□□□□□ -1.51
SQLE-202ENST00000518604 SOX8P57073 446 aa5.6□□□□□ -1.51
SQLE-202ENST00000518604 MXRA7P84157 204 aa5.6□□□□□ -1.51
SQLE-202ENST00000518604 NHLH2Q02577 135 aa5.6□□□□□ -1.51
SQLE-202ENST00000518604 PICALMQ13492 652 aa5.6□□□□□ -1.51
SQLE-202ENST00000518604 HABP2Q14520 560 aaPredicted RBP5.6□□□□□ -1.51
SQLE-202ENST00000518604 RRP1BQ14684 758 aaKnown RBP5.6□□□□□ -1.51
SQLE-202ENST00000518604 FAM102AQ5T9C2 384 aaPredicted RBP5.6□□□□□ -1.51
SQLE-202ENST00000518604 AGAP9Q5VTM2 703 aa5.6□□□□□ -1.51
SQLE-202ENST00000518604 METRNLQ641Q3 311 aa5.6□□□□□ -1.51
SQLE-202ENST00000518604 APOA5Q6Q788 366 aa5.6□□□□□ -1.51
SQLE-202ENST00000518604 SPATA31D4Q6ZUB0 917 aa5.6□□□□□ -1.51
SQLE-202ENST00000518604 SYT12Q8IV01 421 aa5.6□□□□□ -1.51
SQLE-202ENST00000518604 ZFPM1Q8IX07 1006 aa5.6□□□□□ -1.51
SQLE-202ENST00000518604 TBC1D15Q8TC07 691 aa5.6□□□□□ -1.51
SQLE-202ENST00000518604 DVL3Q92997 716 aaPredicted RBP5.6□□□□□ -1.51
SQLE-202ENST00000518604 NT5C1BQ96P26 610 aa5.6□□□□□ -1.51
SQLE-202ENST00000518604 C1QTNF3Q9BXJ4 246 aa5.6□□□□□ -1.51
SQLE-202ENST00000518604 BTBD1Q9H0C5 482 aa5.6□□□□□ -1.51
SQLE-202ENST00000518604 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.6□□□□□ -1.51
SQLE-202ENST00000518604 STAP2Q9UGK3 403 aa5.6□□□□□ -1.51
SQLE-202ENST00000518604 USP25Q9UHP3 1055 aa5.6□□□□□ -1.51
SQLE-202ENST00000518604 CPA4Q9UI42 421 aa5.6□□□□□ -1.51
SQLE-202ENST00000518604 ATP11BQ9Y2G3 1177 aa5.6□□□□□ -1.51
SQLE-202ENST00000518604 MED16Q9Y2X0 877 aa5.6□□□□□ -1.51
SQLE-202ENST00000518604 CDHR4A6H8M9 788 aa5.59□□□□□ -1.51
SQLE-202ENST00000518604 KRTAP9-7A8MTY7 169 aa5.59□□□□□ -1.51
SQLE-202ENST00000518604 MYO1FO00160 1098 aa5.59□□□□□ -1.51
SQLE-202ENST00000518604 AGFG2O95081 481 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms