RNA–Protein interactions for RNA: ENST00000515223.1

TRIM41-207, Transcript of tripartite motif containing 41, humanhuman

TSL 2

Gene TRIM41, Length 5,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-207ENST00000515223 MTHFD1LQ6UB35 978 aa16.86■□□□□ 0.29
TRIM41-207ENST00000515223 ATPAF2Q8N5M1 289 aa16.86■□□□□ 0.29
TRIM41-207ENST00000515223 AGBL3Q8NEM8 1001 aa16.86■□□□□ 0.29
TRIM41-207ENST00000515223 KLC4Q9NSK0 619 aa16.86■□□□□ 0.29
TRIM41-207ENST00000515223 FBXL5Q9UKA1 691 aa16.86■□□□□ 0.29
TRIM41-207ENST00000515223 SYF2O95926 243 aaKnown RBP16.85■□□□□ 0.29
TRIM41-207ENST00000515223 SERPIND1P05546 499 aa16.85■□□□□ 0.29
TRIM41-207ENST00000515223 EEF1DP29692 281 aaKnown RBP16.85■□□□□ 0.29
TRIM41-207ENST00000515223 NMT1P30419 496 aaKnown RBP16.85■□□□□ 0.29
TRIM41-207ENST00000515223 SLC1A1P43005 524 aa16.85■□□□□ 0.29
TRIM41-207ENST00000515223 SFSWAPQ12872 951 aaKnown RBP16.85■□□□□ 0.29
TRIM41-207ENST00000515223 TMEM259Q4ZIN3 620 aa16.85■□□□□ 0.29
TRIM41-207ENST00000515223 ARMC6Q6NXE6 501 aa16.85■□□□□ 0.29
TRIM41-207ENST00000515223 RFFLQ8WZ73 363 aa16.85■□□□□ 0.29
TRIM41-207ENST00000515223 PSD3Q9NYI0 1048 aa16.85■□□□□ 0.29
TRIM41-207ENST00000515223 HSPBP1Q9NZL4 362 aa16.85■□□□□ 0.29
TRIM41-207ENST00000515223 POLRMTO00411 1230 aaKnown RBP16.85■□□□□ 0.29
TRIM41-207ENST00000515223 DPEP1P16444 411 aa16.85■□□□□ 0.29
TRIM41-207ENST00000515223 ZC3H18Q86VM9 953 aaKnown RBP16.85■□□□□ 0.29
TRIM41-207ENST00000515223 OR9Q1Q8NGQ5 310 aa16.85■□□□□ 0.29
TRIM41-207ENST00000515223 ZFATQ9P243 1243 aa16.85■□□□□ 0.29
TRIM41-207ENST00000515223 ITIH6Q6UXX5 1313 aa16.85■□□□□ 0.29
TRIM41-207ENST00000515223 GFAPP14136 432 aa16.85■□□□□ 0.29
TRIM41-207ENST00000515223 PDGFRAP16234 1089 aa16.85■□□□□ 0.29
TRIM41-207ENST00000515223 DDIASQ8IXT1 998 aa16.85■□□□□ 0.29
TRIM41-207ENST00000515223 SRBD1Q8N5C6 995 aaKnown RBP16.85■□□□□ 0.29
TRIM41-207ENST00000515223 MARCH10Q8NA82 808 aaPredicted RBP16.85■□□□□ 0.29
TRIM41-207ENST00000515223 ZNF473Q8WTR7 871 aaKnown RBP16.85■□□□□ 0.29
TRIM41-207ENST00000515223 PPP1R2P1Q96PQ5 205 aa16.85■□□□□ 0.29
TRIM41-207ENST00000515223 DLC1Q96QB1 1528 aa16.85■□□□□ 0.29
TRIM41-207ENST00000515223 PIK3R2O00459 728 aa16.85■□□□□ 0.29
TRIM41-207ENST00000515223 ACOT2P49753 483 aa16.85■□□□□ 0.29
TRIM41-207ENST00000515223 PRKCQQ04759 706 aa16.85■□□□□ 0.29
TRIM41-207ENST00000515223 TMEM62Q0P6H9 643 aa16.85■□□□□ 0.29
TRIM41-207ENST00000515223 NCOA4Q13772 614 aa16.85■□□□□ 0.29
TRIM41-207ENST00000515223 ANLNQ9NQW6 1124 aa16.85■□□□□ 0.29
TRIM41-207ENST00000515223 SLC16A3O15427 465 aaKnown RBP16.85■□□□□ 0.29
TRIM41-207ENST00000515223 ACADSBP45954 432 aa16.85■□□□□ 0.29
TRIM41-207ENST00000515223 SLC26A4O43511 780 aa16.84■□□□□ 0.29
TRIM41-207ENST00000515223 SCP2P22307 547 aa16.84■□□□□ 0.29
TRIM41-207ENST00000515223 HARS2P49590 506 aaKnown RBP16.84■□□□□ 0.29
TRIM41-207ENST00000515223 EIF3EP60228 445 aaKnown RBP16.84■□□□□ 0.29
TRIM41-207ENST00000515223 LRRC14Q15048 493 aa16.84■□□□□ 0.29
TRIM41-207ENST00000515223 NAF1Q96HR8 494 aaKnown RBP16.84■□□□□ 0.29
TRIM41-207ENST00000515223 COLEC11Q9BWP8 271 aa16.84■□□□□ 0.29
TRIM41-207ENST00000515223 ING2Q9H160 280 aa16.84■□□□□ 0.29
TRIM41-207ENST00000515223 TMEM60Q9H2L4 133 aa16.84■□□□□ 0.29
TRIM41-207ENST00000515223 KIF17Q9P2E2 1029 aa16.84■□□□□ 0.29
TRIM41-207ENST00000515223 PABPC5Q96DU9 382 aaKnown RBP16.84■□□□□ 0.29
TRIM41-207ENST00000515223 EML4Q9HC35 981 aaKnown RBP16.84■□□□□ 0.29
TRIM41-207ENST00000515223 GGT7Q9UJ14 662 aa16.84■□□□□ 0.29
TRIM41-207ENST00000515223 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.84■□□□□ 0.29
TRIM41-207ENST00000515223 FAM187AA6NFU0 413 aa16.84■□□□□ 0.29
TRIM41-207ENST00000515223 SPAG7O75391 227 aa16.84■□□□□ 0.29
TRIM41-207ENST00000515223 PDGFRBP09619 1106 aa16.84■□□□□ 0.29
TRIM41-207ENST00000515223 HMOX2P30519 316 aa16.84■□□□□ 0.29
TRIM41-207ENST00000515223 EIF2B5Q13144 721 aaKnown RBP16.84■□□□□ 0.29
TRIM41-207ENST00000515223 MTFR1Q15390 333 aa16.84■□□□□ 0.29
TRIM41-207ENST00000515223 PRAMEF18Q5VWM3 479 aa16.84■□□□□ 0.29
TRIM41-207ENST00000515223 NOTUMQ6P988 496 aa16.84■□□□□ 0.29
TRIM41-207ENST00000515223 FAM47EQ6ZV65 393 aa16.84■□□□□ 0.29
TRIM41-207ENST00000515223 ZBED8Q8IZ13 594 aa16.84■□□□□ 0.29
TRIM41-207ENST00000515223 OR2W6PQ8NHA6 318 aa16.84■□□□□ 0.29
TRIM41-207ENST00000515223 AGPAT1Q99943 283 aa16.84■□□□□ 0.29
TRIM41-207ENST00000515223 RUBCNLQ9H714 662 aa16.84■□□□□ 0.29
TRIM41-207ENST00000515223 H0Y3Z8 333 aa16.84■□□□□ 0.29
TRIM41-207ENST00000515223 DIAPH2O60879 1101 aa16.84■□□□□ 0.29
TRIM41-207ENST00000515223 ERVK-24P63145 666 aa16.84■□□□□ 0.29
TRIM41-207ENST00000515223 PRKCEQ02156 737 aa16.84■□□□□ 0.29
TRIM41-207ENST00000515223 ATF7IP2Q5U623 682 aa16.84■□□□□ 0.29
TRIM41-207ENST00000515223 TAGAPQ8N103 731 aa16.84■□□□□ 0.29
TRIM41-207ENST00000515223 RBM12Q9NTZ6 932 aaKnown RBP16.84■□□□□ 0.29
TRIM41-207ENST00000515223 SYCE1LA8MT33 242 aa16.83■□□□□ 0.29
TRIM41-207ENST00000515223 MEFVO15553 781 aaPredicted RBP16.83■□□□□ 0.29
TRIM41-207ENST00000515223 RFX5P48382 616 aaPredicted RBP16.83■□□□□ 0.29
TRIM41-207ENST00000515223 PDXDC1Q6P996 788 aa16.83■□□□□ 0.29
TRIM41-207ENST00000515223 NUDCD3Q8IVD9 361 aa16.83■□□□□ 0.29
TRIM41-207ENST00000515223 HIPK4Q8NE63 616 aa16.83■□□□□ 0.29
TRIM41-207ENST00000515223 SNF8Q96H20 258 aa16.83■□□□□ 0.29
TRIM41-207ENST00000515223 PHF20Q9BVI0 1012 aa16.83■□□□□ 0.29
TRIM41-207ENST00000515223 LRRIQ3A6PVS8 624 aaPredicted RBP16.83■□□□□ 0.29
TRIM41-207ENST00000515223 GYG2O15488 501 aa16.83■□□□□ 0.29
TRIM41-207ENST00000515223 CYP26A1O43174 497 aa16.83■□□□□ 0.29
TRIM41-207ENST00000515223 TLR2O60603 784 aa16.83■□□□□ 0.29
TRIM41-207ENST00000515223 RTN2O75298 545 aa16.83■□□□□ 0.29
TRIM41-207ENST00000515223 NDUFS3O75489 264 aa16.83■□□□□ 0.29
TRIM41-207ENST00000515223 IRF1P10914 325 aa16.83■□□□□ 0.29
TRIM41-207ENST00000515223 EFCAB12Q6NXP0 572 aa16.83■□□□□ 0.29
TRIM41-207ENST00000515223 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.83■□□□□ 0.293e-12■■□□□ 14.1
TRIM41-207ENST00000515223 NT5C1AQ9BXI3 368 aa16.83■□□□□ 0.29
TRIM41-207ENST00000515223 LATS2Q9NRM7 1088 aa16.83■□□□□ 0.29
TRIM41-207ENST00000515223 NOP53Q9NZM5 478 aaKnown RBP16.83■□□□□ 0.29
TRIM41-207ENST00000515223 SPDYE5A6NIY4 337 aa16.83■□□□□ 0.28
TRIM41-207ENST00000515223 RGS7P49802 495 aa16.83■□□□□ 0.28
TRIM41-207ENST00000515223 PMS2P54278 862 aa16.83■□□□□ 0.28
TRIM41-207ENST00000515223 UGP2Q16851 508 aa16.83■□□□□ 0.28
TRIM41-207ENST00000515223 SPDYE7PQ495Y7 208 aa16.83■□□□□ 0.28
TRIM41-207ENST00000515223 EPN3Q9H201 632 aa16.83■□□□□ 0.28
TRIM41-207ENST00000515223 ZSCAN9O15535 394 aaPredicted RBP16.83■□□□□ 0.28
TRIM41-207ENST00000515223 MAPRE2Q15555 327 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms