RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 SMYD4Q8IYR2 804 aaPredicted RBP14.72□□□□□ -0.05
SNF8-206ENST00000509989 CXorf38Q8TB03 319 aa14.72□□□□□ -0.05
SNF8-206ENST00000509989 PLEKHO2Q8TD55 490 aa14.72□□□□□ -0.05
SNF8-206ENST00000509989 EMILIN2Q9BXX0 1053 aa14.72□□□□□ -0.05
SNF8-206ENST00000509989 POMKQ9H5K3 350 aa14.72□□□□□ -0.05
SNF8-206ENST00000509989 TMEM206Q9H813 350 aa14.72□□□□□ -0.05
SNF8-206ENST00000509989 HSPBP1Q9NZL4 362 aa14.72□□□□□ -0.05
SNF8-206ENST00000509989 MAPK8IP1Q9UQF2 711 aa14.72□□□□□ -0.05
SNF8-206ENST00000509989 ANO9A1A5B4 782 aa14.71□□□□□ -0.05
SNF8-206ENST00000509989 PIRO00625 290 aa14.71□□□□□ -0.05
SNF8-206ENST00000509989 EXTL3O43909 919 aa14.71□□□□□ -0.05
SNF8-206ENST00000509989 TBC1D4O60343 1298 aa14.71□□□□□ -0.05
SNF8-206ENST00000509989 CYP3A5P20815 502 aa14.71□□□□□ -0.05
SNF8-206ENST00000509989 RPL9P32969 192 aaKnown RBP14.71□□□□□ -0.05
SNF8-206ENST00000509989 ABCD1P33897 745 aa14.71□□□□□ -0.05
SNF8-206ENST00000509989 OR1D2P34982 312 aa14.71□□□□□ -0.05
SNF8-206ENST00000509989 CYP2J2P51589 502 aa14.71□□□□□ -0.05
SNF8-206ENST00000509989 POSTNQ15063 836 aa14.71□□□□□ -0.05
SNF8-206ENST00000509989 VARS2Q5ST30 1063 aaKnown RBP14.71□□□□□ -0.05
SNF8-206ENST00000509989 GPD1LQ8N335 351 aa14.71□□□□□ -0.05
SNF8-206ENST00000509989 TMEM87AQ8NBN3 555 aa14.71□□□□□ -0.05
SNF8-206ENST00000509989 OR5B17Q8NGF7 314 aa14.71□□□□□ -0.05
SNF8-206ENST00000509989 BORCS6Q96GS4 357 aa14.71□□□□□ -0.05
SNF8-206ENST00000509989 SUSD3Q96L08 255 aa14.71□□□□□ -0.05
SNF8-206ENST00000509989 POP1Q99575 1024 aaKnown RBP14.71□□□□□ -0.05
SNF8-206ENST00000509989 EXOC1Q9NV70 894 aa14.71□□□□□ -0.05
SNF8-206ENST00000509989 DPP3Q9NY33 737 aa14.71□□□□□ -0.05
SNF8-206ENST00000509989 RBAKQ9NYW8 714 aaPredicted RBP14.71□□□□□ -0.05
SNF8-206ENST00000509989 FNIP2Q9P278 1114 aa14.71□□□□□ -0.05
SNF8-206ENST00000509989 MTRRQ9UBK8 725 aa14.71□□□□□ -0.05
SNF8-206ENST00000509989 USP25Q9UHP3 1055 aa14.71□□□□□ -0.05
SNF8-206ENST00000509989 CDY1Q9Y6F8 540 aa14.71□□□□□ -0.05
SNF8-206ENST00000509989 C19orf67A6NJJ6 358 aa14.7□□□□□ -0.06
SNF8-206ENST00000509989 ADH1AP07327 375 aa14.7□□□□□ -0.06
SNF8-206ENST00000509989 OR4Q2P0C623 313 aa14.7□□□□□ -0.06
SNF8-206ENST00000509989 AARSP49588 968 aaKnown RBP eCLIP14.7□□□□□ -0.06
SNF8-206ENST00000509989 CASP4P49662 377 aa14.7□□□□□ -0.06
SNF8-206ENST00000509989 MRPL58Q14197 206 aaKnown RBP14.7□□□□□ -0.06
SNF8-206ENST00000509989 BMS1Q14692 1282 aaKnown RBP14.7□□□□□ -0.06
SNF8-206ENST00000509989 KNOP1Q1ED39 458 aaKnown RBP14.7□□□□□ -0.06
SNF8-206ENST00000509989 C1orf127Q8N9H9 656 aa14.7□□□□□ -0.06
SNF8-206ENST00000509989 ELMO3Q96BJ8 720 aa14.7□□□□□ -0.06
SNF8-206ENST00000509989 ZNF707Q96C28 371 aaPredicted RBP14.7□□□□□ -0.06
SNF8-206ENST00000509989 TMEM209Q96SK2 561 aa14.7□□□□□ -0.06
SNF8-206ENST00000509989 PYM1Q9BRP8 204 aaKnown RBP14.7□□□□□ -0.06
SNF8-206ENST00000509989 ADAM7Q9H2U9 754 aa14.7□□□□□ -0.06
SNF8-206ENST00000509989 KCTD10Q9H3F6 313 aa14.7□□□□□ -0.06
SNF8-206ENST00000509989 ASB7Q9H672 318 aa14.7□□□□□ -0.06
SNF8-206ENST00000509989 SIX4Q9UIU6 781 aa14.7□□□□□ -0.06
SNF8-206ENST00000509989 CIZ1Q9ULV3 898 aaPredicted RBP14.7□□□□□ -0.06
SNF8-206ENST00000509989 NUB1Q9Y5A7 615 aa14.7□□□□□ -0.06
SNF8-206ENST00000509989 M0QZQ0 153 aa14.69□□□□□ -0.06
SNF8-206ENST00000509989 TNFRSF10AO00220 468 aa14.69□□□□□ -0.06
SNF8-206ENST00000509989 VNN2O95498 520 aa14.69□□□□□ -0.06
SNF8-206ENST00000509989 GLUD1P00367 558 aa14.69□□□□□ -0.06
SNF8-206ENST00000509989 ARPP19P56211 112 aa14.69□□□□□ -0.06
SNF8-206ENST00000509989 LILRA4P59901 499 aa14.69□□□□□ -0.06
SNF8-206ENST00000509989 TFAMQ00059 246 aaKnown RBP14.69□□□□□ -0.06
SNF8-206ENST00000509989 CBX2Q14781 532 aaPredicted RBP14.69□□□□□ -0.06
SNF8-206ENST00000509989 KYAT1Q16773 422 aa14.69□□□□□ -0.06
SNF8-206ENST00000509989 PUS10Q3MIT2 529 aaKnown RBP14.69□□□□□ -0.06
SNF8-206ENST00000509989 ADHFE1Q8IWW8 467 aa14.69□□□□□ -0.06
SNF8-206ENST00000509989 GJD3Q8N144 294 aa14.69□□□□□ -0.06
SNF8-206ENST00000509989 KREMEN2Q8NCW0 462 aa14.69□□□□□ -0.06
SNF8-206ENST00000509989 BEST2Q8NFU1 509 aa14.69□□□□□ -0.06
SNF8-206ENST00000509989 ZNF516Q92618 1163 aa14.69□□□□□ -0.06
SNF8-206ENST00000509989 RPGRIP1Q96KN7 1286 aa14.69□□□□□ -0.06
SNF8-206ENST00000509989 MTMR12Q9C0I1 747 aa14.69□□□□□ -0.06
SNF8-206ENST00000509989 EPHX3Q9H6B9 360 aa14.69□□□□□ -0.06
SNF8-206ENST00000509989 CHMP5Q9NZZ3 219 aa14.69□□□□□ -0.06
SNF8-206ENST00000509989 FBXL5Q9UKA1 691 aa14.69□□□□□ -0.06
SNF8-206ENST00000509989 C2CD2Q9Y426 696 aa14.69□□□□□ -0.06
SNF8-206ENST00000509989 TRIOO75962 3097 aa14.69□□□□□ -0.06
SNF8-206ENST00000509989 CCDC195A0A1B0GUA6 201 aa14.68□□□□□ -0.06
SNF8-206ENST00000509989 WDR27A2RRH5 827 aa14.68□□□□□ -0.06
SNF8-206ENST00000509989 NRG2O14511 850 aaPredicted RBP14.68□□□□□ -0.06
SNF8-206ENST00000509989 HCRTO43612 131 aa14.68□□□□□ -0.06
SNF8-206ENST00000509989 RHOBTB3O94955 611 aa14.68□□□□□ -0.06
SNF8-206ENST00000509989 SEC24AO95486 1093 aa14.68□□□□□ -0.06
SNF8-206ENST00000509989 ITGB3P05106 788 aa14.68□□□□□ -0.06
SNF8-206ENST00000509989 HOXB8P17481 243 aaPredicted RBP14.68□□□□□ -0.06
SNF8-206ENST00000509989 POLR2BP30876 1174 aaKnown RBP14.68□□□□□ -0.06
SNF8-206ENST00000509989 SSTR3P32745 418 aaPredicted RBP14.68□□□□□ -0.06
SNF8-206ENST00000509989 ANP32AP39687 249 aaKnown RBP14.68□□□□□ -0.06
SNF8-206ENST00000509989 NTHL1P78549 312 aa14.68□□□□□ -0.06
SNF8-206ENST00000509989 ROR1Q01973 937 aa14.68□□□□□ -0.06
SNF8-206ENST00000509989 FAM160A1Q05DH4 1040 aa14.68□□□□□ -0.06
SNF8-206ENST00000509989 ELAVL2Q12926 359 aaKnown RBP14.68□□□□□ -0.06
SNF8-206ENST00000509989 RAB33AQ14088 237 aa14.68□□□□□ -0.06
SNF8-206ENST00000509989 ISM2Q6H9L7 571 aa14.68□□□□□ -0.06
SNF8-206ENST00000509989 GPR149Q86SP6 731 aa14.68□□□□□ -0.06
SNF8-206ENST00000509989 PPFIBP1Q86W92 1011 aa14.68□□□□□ -0.06
SNF8-206ENST00000509989 CD302Q8IX05 232 aa14.68□□□□□ -0.06
SNF8-206ENST00000509989 GPR65Q8IYL9 337 aa14.68□□□□□ -0.06
SNF8-206ENST00000509989 ST13P5Q8NFI4 369 aaPredicted RBP14.68□□□□□ -0.06
SNF8-206ENST00000509989 SENP8Q96LD8 212 aa14.68□□□□□ -0.06
SNF8-206ENST00000509989 RTP3Q9BQQ7 232 aa14.68□□□□□ -0.06
SNF8-206ENST00000509989 CRISPLD1Q9H336 500 aa14.68□□□□□ -0.06
SNF8-206ENST00000509989 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.68□□□□□ -0.06
SNF8-206ENST00000509989 STK39Q9UEW8 545 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms