RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 CLDN10P78369 228 aa7.87□□□□□ -1.15
PDGFC-203ENST00000502773 EMC10Q5UCC4 262 aa7.87□□□□□ -1.15
PDGFC-203ENST00000502773 CCDC137Q6PK04 289 aaKnown RBP7.87□□□□□ -1.15
PDGFC-203ENST00000502773 POTEAQ6S8J7 498 aa7.87□□□□□ -1.15
PDGFC-203ENST00000502773 MPZL3Q6UWV2 235 aa7.87□□□□□ -1.15
PDGFC-203ENST00000502773 ERICH1Q86X53 443 aa7.87□□□□□ -1.15
PDGFC-203ENST00000502773 C12orf50Q8NA57 414 aaPredicted RBP7.87□□□□□ -1.15
PDGFC-203ENST00000502773 REPS2Q8NFH8 660 aa7.87□□□□□ -1.15
PDGFC-203ENST00000502773 IL31RAQ8NI17 732 aa7.87□□□□□ -1.15
PDGFC-203ENST00000502773 SLCO2A1Q92959 643 aa7.87□□□□□ -1.15
PDGFC-203ENST00000502773 ZKSCAN4Q969J2 545 aaPredicted RBP7.87□□□□□ -1.15
PDGFC-203ENST00000502773 SPDL1Q96EA4 605 aa7.87□□□□□ -1.15
PDGFC-203ENST00000502773 SNF8Q96H20 258 aa7.87□□□□□ -1.15
PDGFC-203ENST00000502773 CFAP57Q96MR6 1250 aa7.87□□□□□ -1.15
PDGFC-203ENST00000502773 MAK16Q9BXY0 300 aaKnown RBP7.87□□□□□ -1.15
PDGFC-203ENST00000502773 PACSIN1Q9BY11 444 aa7.87□□□□□ -1.15
PDGFC-203ENST00000502773 SENP1Q9P0U3 644 aa7.87□□□□□ -1.15
PDGFC-203ENST00000502773 TNS1Q9HBL0 1735 aaKnown RBP7.86□□□□□ -1.15
PDGFC-203ENST00000502773 ACKR2O00590 384 aa7.86□□□□□ -1.15
PDGFC-203ENST00000502773 PROSCO94903 275 aa7.86□□□□□ -1.15
PDGFC-203ENST00000502773 MCF2P10911 925 aa7.86□□□□□ -1.15
PDGFC-203ENST00000502773 COMTP21964 271 aa7.86□□□□□ -1.15
PDGFC-203ENST00000502773 RNASE9P60153 205 aaKnown RBP7.86□□□□□ -1.15
PDGFC-203ENST00000502773 KCNA1Q09470 495 aa7.86□□□□□ -1.15
PDGFC-203ENST00000502773 SEPT7Q16181 437 aaKnown RBP7.86□□□□□ -1.15
PDGFC-203ENST00000502773 SHROOM1Q2M3G4 852 aaPredicted RBP7.86□□□□□ -1.15
PDGFC-203ENST00000502773 PAGR1Q9BTK6 254 aa7.86□□□□□ -1.15
PDGFC-203ENST00000502773 TRAIPQ9BWF2 469 aa7.86□□□□□ -1.15
PDGFC-203ENST00000502773 NFKBIZQ9BYH8 718 aa7.86□□□□□ -1.15
PDGFC-203ENST00000502773 SAMD15Q9P1V8 674 aa7.86□□□□□ -1.15
PDGFC-203ENST00000502773 ANKFY1Q9P2R3 1169 aa7.86□□□□□ -1.15
PDGFC-203ENST00000502773 A0A0U1RQJ8 604 aa7.86□□□□□ -1.15
PDGFC-203ENST00000502773 RARGP13631 454 aa7.86□□□□□ -1.15
PDGFC-203ENST00000502773 ELF1P32519 619 aa7.86□□□□□ -1.15
PDGFC-203ENST00000502773 COILP38432 576 aaPredicted RBP7.86□□□□□ -1.15
PDGFC-203ENST00000502773 CCNG2Q16589 344 aa7.86□□□□□ -1.15
PDGFC-203ENST00000502773 DCAF4L1Q3SXM0 396 aa7.86□□□□□ -1.15
PDGFC-203ENST00000502773 ARMC3Q5W041 872 aa7.86□□□□□ -1.15
PDGFC-203ENST00000502773 JAMLQ86YT9 394 aa7.86□□□□□ -1.15
PDGFC-203ENST00000502773 MCOLN2Q8IZK6 566 aa7.86□□□□□ -1.15
PDGFC-203ENST00000502773 IQCKQ8N0W5 287 aa7.86□□□□□ -1.15
PDGFC-203ENST00000502773 MIPOL1Q8TD10 442 aa7.86□□□□□ -1.15
PDGFC-203ENST00000502773 BCAS4Q8TDM0 211 aa7.86□□□□□ -1.15
PDGFC-203ENST00000502773 CASKIN2Q8WXE0 1202 aa7.86□□□□□ -1.15
PDGFC-203ENST00000502773 ATRIPQ8WXE1 791 aa7.86□□□□□ -1.15
PDGFC-203ENST00000502773 ZBTB10Q96DT7 871 aa7.86□□□□□ -1.15
PDGFC-203ENST00000502773 MS4A14Q96JA4 679 aa7.86□□□□□ -1.15
PDGFC-203ENST00000502773 SPATA33Q96N06 139 aa7.86□□□□□ -1.15
PDGFC-203ENST00000502773 AP1M1Q9BXS5 423 aa7.86□□□□□ -1.15
PDGFC-203ENST00000502773 PABPC3Q9H361 631 aaKnown RBP7.86□□□□□ -1.15
PDGFC-203ENST00000502773 LRRC19Q9H756 370 aa7.86□□□□□ -1.15
PDGFC-203ENST00000502773 NKIRAS1Q9NYS0 192 aa7.86□□□□□ -1.15
PDGFC-203ENST00000502773 TPX2Q9ULW0 747 aaKnown RBP7.86□□□□□ -1.15
PDGFC-203ENST00000502773 A0A0B4J269 797 aa7.86□□□□□ -1.15
PDGFC-203ENST00000502773 ARHGEF37A1IGU5 675 aa7.86□□□□□ -1.15
PDGFC-203ENST00000502773 SPDYE5A6NIY4 337 aa7.86□□□□□ -1.15
PDGFC-203ENST00000502773 ABL1P00519 1130 aa7.86□□□□□ -1.15
PDGFC-203ENST00000502773 WEE2P0C1S8 567 aa7.86□□□□□ -1.15
PDGFC-203ENST00000502773 CARSP49589 748 aaKnown RBP7.86□□□□□ -1.15
PDGFC-203ENST00000502773 NOP14P78316 857 aaKnown RBP7.86□□□□□ -1.15
PDGFC-203ENST00000502773 MKRN3Q13064 507 aaKnown RBP7.86□□□□□ -1.15
PDGFC-203ENST00000502773 TFDP2Q14188 446 aa7.86□□□□□ -1.15
PDGFC-203ENST00000502773 ZNF699Q32M78 642 aa7.86□□□□□ -1.15
PDGFC-203ENST00000502773 LMO3Q8TAP4 145 aa7.86□□□□□ -1.15
PDGFC-203ENST00000502773 FEZF2Q8TBJ5 459 aa7.86□□□□□ -1.15
PDGFC-203ENST00000502773 CENPTQ96BT3 561 aa7.86□□□□□ -1.15
PDGFC-203ENST00000502773 TMEM109Q9BVC6 243 aa7.86□□□□□ -1.15
PDGFC-203ENST00000502773 DDX47Q9H0S4 455 aaKnown RBP7.86□□□□□ -1.15
PDGFC-203ENST00000502773 TMBIM4Q9HC24 238 aa7.86□□□□□ -1.15
PDGFC-203ENST00000502773 PDLIM7Q9NR12 457 aa7.86□□□□□ -1.15
PDGFC-203ENST00000502773 ASNSD1Q9NWL6 643 aa7.86□□□□□ -1.15
PDGFC-203ENST00000502773 CHCHD3Q9NX63 227 aaKnown RBP7.86□□□□□ -1.15
PDGFC-203ENST00000502773 ATXN2Q99700 1313 aaKnown RBP7.86□□□□□ -1.15
PDGFC-203ENST00000502773 EIF3HO15372 352 aaKnown RBP eCLIP7.85□□□□□ -1.15
PDGFC-203ENST00000502773 PFDN1O60925 122 aa7.85□□□□□ -1.15
PDGFC-203ENST00000502773 ZMYND10O75800 440 aa7.85□□□□□ -1.15
PDGFC-203ENST00000502773 SGPL1O95470 568 aa7.85□□□□□ -1.15
PDGFC-203ENST00000502773 GNAT1P11488 350 aa7.85□□□□□ -1.15
PDGFC-203ENST00000502773 ADCY8P40145 1251 aa7.85□□□□□ -1.15
PDGFC-203ENST00000502773 PPP2R2AP63151 447 aa7.85□□□□□ -1.15
PDGFC-203ENST00000502773 STAT4Q14765 748 aa7.85□□□□□ -1.15
PDGFC-203ENST00000502773 CYP1B1Q16678 543 aa7.85□□□□□ -1.15
PDGFC-203ENST00000502773 LGSNQ5TDP6 509 aa7.85□□□□□ -1.15
PDGFC-203ENST00000502773 CCDC121Q6ZUS5 278 aa7.85□□□□□ -1.15
PDGFC-203ENST00000502773 BZW1Q7L1Q6 419 aaKnown RBP7.85□□□□□ -1.15
PDGFC-203ENST00000502773 DEFB132Q7Z7B7 95 aa7.85□□□□□ -1.15
PDGFC-203ENST00000502773 CPLX4Q7Z7G2 160 aa7.85□□□□□ -1.15
PDGFC-203ENST00000502773 ZNF467Q7Z7K2 595 aaPredicted RBP7.85□□□□□ -1.15
PDGFC-203ENST00000502773 RBBP8NLQ8NC74 664 aaPredicted RBP7.85□□□□□ -1.15
PDGFC-203ENST00000502773 GPRC5AQ8NFJ5 357 aa7.85□□□□□ -1.15
PDGFC-203ENST00000502773 SEC14L1Q92503 715 aa7.85□□□□□ -1.15
PDGFC-203ENST00000502773 CABS1Q96KC9 395 aa7.85□□□□□ -1.15
PDGFC-203ENST00000502773 YIPF3Q9GZM5 350 aa7.85□□□□□ -1.15
PDGFC-203ENST00000502773 ACTR5Q9H9F9 607 aaPredicted RBP7.85□□□□□ -1.15
PDGFC-203ENST00000502773 SUGCTQ9HAC7 445 aa7.85□□□□□ -1.15
PDGFC-203ENST00000502773 ANAPC5Q9UJX4 755 aa7.85□□□□□ -1.15
PDGFC-203ENST00000502773 IGKV6D-21A0A0A0MT36 114 aa7.85□□□□□ -1.15
PDGFC-203ENST00000502773 A0A0G2JLL6 359 aaPredicted RBP7.85□□□□□ -1.15
PDGFC-203ENST00000502773 FSCN2O14926 492 aa7.85□□□□□ -1.15
PDGFC-203ENST00000502773 ATP9AO75110 1047 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms