RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 KITP10721 976 aa13.83□□□□□ -0.2
GAPVD1-220ENST00000497580 FMO5P49326 533 aa13.83□□□□□ -0.2
GAPVD1-220ENST00000497580 MPP3Q13368 585 aa13.83□□□□□ -0.2
GAPVD1-220ENST00000497580 GSTA3Q16772 222 aa13.83□□□□□ -0.2
GAPVD1-220ENST00000497580 ARHGAP24Q8N264 748 aa13.83□□□□□ -0.2
GAPVD1-220ENST00000497580 AZIN2Q96A70 460 aa13.83□□□□□ -0.2
GAPVD1-220ENST00000497580 FAM84BQ96KN1 310 aaPredicted RBP13.83□□□□□ -0.2
GAPVD1-220ENST00000497580 ANXA13P27216 316 aa13.82□□□□□ -0.2
GAPVD1-220ENST00000497580 PCNX4Q63HM2 1172 aa13.82□□□□□ -0.2
GAPVD1-220ENST00000497580 KAZNQ674X7 775 aa13.82□□□□□ -0.2
GAPVD1-220ENST00000497580 SMC1BQ8NDV3 1235 aa13.82□□□□□ -0.2
GAPVD1-220ENST00000497580 EYA3Q99504 573 aa13.82□□□□□ -0.2
GAPVD1-220ENST00000497580 WNT8AQ9H1J5 351 aa13.82□□□□□ -0.2
GAPVD1-220ENST00000497580 BHMT2Q9H2M3 363 aa13.82□□□□□ -0.2
GAPVD1-220ENST00000497580 SAR1AQ9NR31 198 aa13.82□□□□□ -0.2
GAPVD1-220ENST00000497580 PPARGC1AQ9UBK2 798 aaKnown RBP13.82□□□□□ -0.2
GAPVD1-220ENST00000497580 MARCOQ9UEW3 520 aaPredicted RBP13.82□□□□□ -0.2
GAPVD1-220ENST00000497580 MEI4A8MW99 385 aa13.82□□□□□ -0.2
GAPVD1-220ENST00000497580 TP73O15350 636 aa13.82□□□□□ -0.2
GAPVD1-220ENST00000497580 GGPS1O95749 300 aa13.82□□□□□ -0.2
GAPVD1-220ENST00000497580 POTEJP0CG39 1038 aa13.82□□□□□ -0.2
GAPVD1-220ENST00000497580 HIBADHP31937 336 aaKnown RBP13.82□□□□□ -0.2
GAPVD1-220ENST00000497580 HOXD13P35453 343 aa13.82□□□□□ -0.2
GAPVD1-220ENST00000497580 AP2B1P63010 937 aa13.82□□□□□ -0.2
GAPVD1-220ENST00000497580 NOP14P78316 857 aaKnown RBP13.82□□□□□ -0.2
GAPVD1-220ENST00000497580 TTLL12Q14166 644 aaPredicted RBP13.82□□□□□ -0.2
GAPVD1-220ENST00000497580 ALYREFQ86V81 257 aaKnown RBP13.82□□□□□ -0.2
GAPVD1-220ENST00000497580 KAT5Q92993 513 aa13.82□□□□□ -0.2
GAPVD1-220ENST00000497580 ARHGEF38Q9NXL2 777 aa13.82□□□□□ -0.2
GAPVD1-220ENST00000497580 KDM3AQ9Y4C1 1321 aa13.82□□□□□ -0.2
GAPVD1-220ENST00000497580 SLC16A2P36021 539 aa13.82□□□□□ -0.2
GAPVD1-220ENST00000497580 EPHB1P54762 984 aa13.82□□□□□ -0.2
GAPVD1-220ENST00000497580 CBX3Q13185 183 aa13.82□□□□□ -0.2
GAPVD1-220ENST00000497580 GRAMD1BQ3KR37 738 aa13.82□□□□□ -0.2
GAPVD1-220ENST00000497580 FAM182BQ5T319 152 aa13.82□□□□□ -0.2
GAPVD1-220ENST00000497580 ZBED8Q8IZ13 594 aa13.82□□□□□ -0.2
GAPVD1-220ENST00000497580 MYCT1Q8N699 235 aa13.82□□□□□ -0.2
GAPVD1-220ENST00000497580 ARL10Q8N8L6 244 aa13.82□□□□□ -0.2
GAPVD1-220ENST00000497580 CCDC110Q8TBZ0 833 aa13.82□□□□□ -0.2
GAPVD1-220ENST00000497580 KLHL11Q9NVR0 708 aa13.82□□□□□ -0.2
GAPVD1-220ENST00000497580 ZMYM2Q9UBW7 1377 aa13.82□□□□□ -0.2
GAPVD1-220ENST00000497580 TRAFD1O14545 582 aaPredicted RBP13.81□□□□□ -0.2
GAPVD1-220ENST00000497580 ADARP55265 1226 aaKnown RBP13.81□□□□□ -0.2
GAPVD1-220ENST00000497580 SLC30A10Q6XR72 485 aa13.81□□□□□ -0.2
GAPVD1-220ENST00000497580 RBM44Q6ZP01 1051 aaKnown RBP13.81□□□□□ -0.2
GAPVD1-220ENST00000497580 PTF1AQ7RTS3 328 aa13.81□□□□□ -0.2
GAPVD1-220ENST00000497580 MTBPQ96DY7 904 aa13.81□□□□□ -0.2
GAPVD1-220ENST00000497580 CFAP57Q96MR6 1250 aa13.81□□□□□ -0.2
GAPVD1-220ENST00000497580 TSSK1BQ9BXA7 367 aa13.81□□□□□ -0.2
GAPVD1-220ENST00000497580 MAK16Q9BXY0 300 aaKnown RBP13.81□□□□□ -0.2
GAPVD1-220ENST00000497580 USTQ9Y2C2 406 aa13.81□□□□□ -0.2
GAPVD1-220ENST00000497580 ZNF510Q9Y2H8 683 aa13.81□□□□□ -0.2
GAPVD1-220ENST00000497580 USP17L15C9J2P7 530 aa13.81□□□□□ -0.2
GAPVD1-220ENST00000497580 USP17L13C9JLJ4 530 aa13.81□□□□□ -0.2
GAPVD1-220ENST00000497580 USP17L11C9JVI0 530 aa13.81□□□□□ -0.2
GAPVD1-220ENST00000497580 USP17L18D6R9N7 530 aa13.81□□□□□ -0.2
GAPVD1-220ENST00000497580 USP17L22D6RA61 530 aa13.81□□□□□ -0.2
GAPVD1-220ENST00000497580 USP17L17D6RBQ6 530 aa13.81□□□□□ -0.2
GAPVD1-220ENST00000497580 USP17L19D6RCP7 530 aa13.81□□□□□ -0.2
GAPVD1-220ENST00000497580 USP17L20D6RJB6 530 aa13.81□□□□□ -0.2
GAPVD1-220ENST00000497580 FCHO1O14526 889 aa13.81□□□□□ -0.2
GAPVD1-220ENST00000497580 IFNB1P01574 187 aa13.81□□□□□ -0.2
GAPVD1-220ENST00000497580 MYL2P10916 166 aa13.81□□□□□ -0.2
GAPVD1-220ENST00000497580 EEF2P13639 858 aaKnown RBP13.81□□□□□ -0.2
GAPVD1-220ENST00000497580 PSMC2P35998 433 aaKnown RBP13.81□□□□□ -0.2
GAPVD1-220ENST00000497580 GRIA2P42262 883 aa13.81□□□□□ -0.2
GAPVD1-220ENST00000497580 HIRAP54198 1017 aaPredicted RBP13.81□□□□□ -0.2
GAPVD1-220ENST00000497580 USP17L24Q0WX57 530 aa13.81□□□□□ -0.2
GAPVD1-220ENST00000497580 SIX1Q15475 284 aaPredicted RBP13.81□□□□□ -0.2
GAPVD1-220ENST00000497580 CTC1Q2NKJ3 1217 aa13.81□□□□□ -0.2
GAPVD1-220ENST00000497580 MMEL1Q495T6 779 aa13.81□□□□□ -0.2
GAPVD1-220ENST00000497580 C12orf60Q5U649 245 aa13.81□□□□□ -0.2
GAPVD1-220ENST00000497580 USP17L6PQ6QN14 398 aa13.81□□□□□ -0.2
GAPVD1-220ENST00000497580 SLC26A7Q8TE54 656 aa13.81□□□□□ -0.2
GAPVD1-220ENST00000497580 PLVAPQ9BX97 442 aa13.81□□□□□ -0.2
GAPVD1-220ENST00000497580 LRRC4BQ9NT99 713 aa13.81□□□□□ -0.2
GAPVD1-220ENST00000497580 APEX2Q9UBZ4 518 aa13.81□□□□□ -0.2
GAPVD1-220ENST00000497580 LGALS13Q9UHV8 139 aa13.81□□□□□ -0.2
GAPVD1-220ENST00000497580 DNM3Q9UQ16 869 aa13.81□□□□□ -0.2
GAPVD1-220ENST00000497580 ASTN1O14525 1302 aa13.81□□□□□ -0.2
GAPVD1-220ENST00000497580 STRCP1A6NGW2 1772 aa13.81□□□□□ -0.2
GAPVD1-220ENST00000497580 CALCAP01258 141 aa13.81□□□□□ -0.2
GAPVD1-220ENST00000497580 ZSCAN5DPP0CG00 497 aa13.81□□□□□ -0.2
GAPVD1-220ENST00000497580 EFTUD2Q15029 972 aaKnown RBP eCLIP13.81□□□□□ -0.21e-6■■■□□ 17.9
GAPVD1-220ENST00000497580 ZYXQ15942 572 aaKnown RBP13.81□□□□□ -0.2
GAPVD1-220ENST00000497580 TBC1D10BQ4KMP7 808 aaPredicted RBP13.81□□□□□ -0.2
GAPVD1-220ENST00000497580 C11orf63Q6NUN7 778 aa13.81□□□□□ -0.2
GAPVD1-220ENST00000497580 PPP2R3CQ969Q6 453 aa13.81□□□□□ -0.2
GAPVD1-220ENST00000497580 NMUR2Q9GZQ4 415 aa13.81□□□□□ -0.2
GAPVD1-220ENST00000497580 PCIF1Q9H4Z3 704 aa13.81□□□□□ -0.2
GAPVD1-220ENST00000497580 KANSL3Q9P2N6 904 aa13.81□□□□□ -0.2
GAPVD1-220ENST00000497580 SLC17A7Q9P2U7 560 aa13.81□□□□□ -0.2
GAPVD1-220ENST00000497580 PDXKO00764 312 aa13.8□□□□□ -0.2
GAPVD1-220ENST00000497580 FAM13AO94988 1023 aa13.8□□□□□ -0.2
GAPVD1-220ENST00000497580 PENKP01210 267 aaPredicted RBP13.8□□□□□ -0.2
GAPVD1-220ENST00000497580 RHBDF2Q6PJF5 856 aa13.8□□□□□ -0.2
GAPVD1-220ENST00000497580 SCUBE1Q8IWY4 988 aa13.8□□□□□ -0.2
GAPVD1-220ENST00000497580 PIP4K2CQ8TBX8 421 aa13.8□□□□□ -0.2
GAPVD1-220ENST00000497580 LZTS2Q9BRK4 669 aa13.8□□□□□ -0.2
GAPVD1-220ENST00000497580 HERPUD2Q9BSE4 406 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms