RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 TTPALQ9BTX7 342 aa12.44□□□□□ -0.42
HLA-B-254ENST00000497377 GTPBP4Q9BZE4 634 aaKnown RBP12.44□□□□□ -0.42
HLA-B-254ENST00000497377 IKZF4Q9H2S9 585 aa12.44□□□□□ -0.42
HLA-B-254ENST00000497377 GOLGA2P5Q9HBQ8 144 aa12.44□□□□□ -0.42
HLA-B-254ENST00000497377 RXFP1Q9HBX9 757 aa12.44□□□□□ -0.42
HLA-B-254ENST00000497377 RMND1Q9NWS8 449 aa12.44□□□□□ -0.42
HLA-B-254ENST00000497377 FNIP2Q9P278 1114 aa12.44□□□□□ -0.42
HLA-B-254ENST00000497377 CACNG4Q9UBN1 327 aa12.44□□□□□ -0.42
HLA-B-254ENST00000497377 XIRP2A4UGR9 3374 aa12.44□□□□□ -0.42
HLA-B-254ENST00000497377 ZNF233A6NK53 670 aa12.43□□□□□ -0.42
HLA-B-254ENST00000497377 CLASP2O75122 1294 aaKnown RBP12.43□□□□□ -0.42
HLA-B-254ENST00000497377 GLP2RO95838 553 aa12.43□□□□□ -0.42
HLA-B-254ENST00000497377 ADH1AP07327 375 aa12.43□□□□□ -0.42
HLA-B-254ENST00000497377 CNPP09543 421 aaKnown RBP12.43□□□□□ -0.42
HLA-B-254ENST00000497377 HOXB8P17481 243 aaPredicted RBP12.43□□□□□ -0.42
HLA-B-254ENST00000497377 GTF2F1P35269 517 aaKnown RBP eCLIP12.43□□□□□ -0.42
HLA-B-254ENST00000497377 LTBRP36941 435 aa12.43□□□□□ -0.42
HLA-B-254ENST00000497377 TFF2Q03403 129 aa12.43□□□□□ -0.42
HLA-B-254ENST00000497377 STK4Q13043 487 aa12.43□□□□□ -0.42
HLA-B-254ENST00000497377 TMEM132DQ14C87 1099 aa12.43□□□□□ -0.42
HLA-B-254ENST00000497377 SURF1Q15526 300 aa12.43□□□□□ -0.42
HLA-B-254ENST00000497377 FAM171A1Q5VUB5 890 aa12.43□□□□□ -0.42
HLA-B-254ENST00000497377 SPATA1Q5VX52 437 aa12.43□□□□□ -0.42
HLA-B-254ENST00000497377 JADE1Q6IE81 842 aa12.43□□□□□ -0.42
HLA-B-254ENST00000497377 ELMSAN1Q6PJG2 1045 aa12.43□□□□□ -0.42
HLA-B-254ENST00000497377 TAS1R1Q7RTX1 841 aa12.43□□□□□ -0.42
HLA-B-254ENST00000497377 BRSK2Q8IWQ3 736 aa12.43□□□□□ -0.42
HLA-B-254ENST00000497377 KIAA0895Q8NCT3 520 aa12.43□□□□□ -0.42
HLA-B-254ENST00000497377 HASPINQ8TF76 798 aa12.43□□□□□ -0.42
HLA-B-254ENST00000497377 AUTS2Q8WXX7 1259 aa12.43□□□□□ -0.42
HLA-B-254ENST00000497377 PIK3R5Q8WYR1 880 aa12.43□□□□□ -0.42
HLA-B-254ENST00000497377 RABGGTAQ92696 567 aa12.43□□□□□ -0.42
HLA-B-254ENST00000497377 IPO9Q96P70 1041 aaKnown RBP12.43□□□□□ -0.42
HLA-B-254ENST00000497377 GSDMAQ96QA5 445 aa12.43□□□□□ -0.42
HLA-B-254ENST00000497377 AGPAT3Q9NRZ7 376 aa12.43□□□□□ -0.42
HLA-B-254ENST00000497377 RBAKQ9NYW8 714 aaPredicted RBP12.43□□□□□ -0.42
HLA-B-254ENST00000497377 DPP7Q9UHL4 492 aa12.43□□□□□ -0.42
HLA-B-254ENST00000497377 NUB1Q9Y5A7 615 aa12.43□□□□□ -0.42
HLA-B-254ENST00000497377 HCFC2Q9Y5Z7 792 aa12.43□□□□□ -0.42
HLA-B-254ENST00000497377 C2CD2LO14523 706 aa12.42□□□□□ -0.42
HLA-B-254ENST00000497377 SYN3O14994 580 aa12.42□□□□□ -0.42
HLA-B-254ENST00000497377 LINC01565O15544 149 aa12.42□□□□□ -0.42
HLA-B-254ENST00000497377 TGFB1I1O43294 461 aa12.42□□□□□ -0.42
HLA-B-254ENST00000497377 KINO60870 393 aaKnown RBP12.42□□□□□ -0.42
HLA-B-254ENST00000497377 TBX10O75333 385 aa12.42□□□□□ -0.42
HLA-B-254ENST00000497377 SMC2O95347 1197 aa12.42□□□□□ -0.42
HLA-B-254ENST00000497377 FGFR3P22607 806 aa12.42□□□□□ -0.42
HLA-B-254ENST00000497377 KLRC2P26717 231 aa12.42□□□□□ -0.42
HLA-B-254ENST00000497377 UBE2HP62256 183 aa12.42□□□□□ -0.42
HLA-B-254ENST00000497377 CLEC17AQ6ZS10 378 aa12.42□□□□□ -0.42
HLA-B-254ENST00000497377 NELFCDQ8IXH7 590 aa12.42□□□□□ -0.42
HLA-B-254ENST00000497377 SLC22A17Q8WUG5 538 aa12.42□□□□□ -0.42
HLA-B-254ENST00000497377 CACTINQ8WUQ7 758 aaKnown RBP12.42□□□□□ -0.42
HLA-B-254ENST00000497377 TMEM174Q8WUU8 243 aa12.42□□□□□ -0.42
HLA-B-254ENST00000497377 RIN2Q8WYP3 895 aaPredicted RBP12.42□□□□□ -0.42
HLA-B-254ENST00000497377 KCTD12Q96CX2 325 aaKnown RBP12.42□□□□□ -0.42
HLA-B-254ENST00000497377 SAAL1Q96ER3 474 aa12.42□□□□□ -0.42
HLA-B-254ENST00000497377 MSLNLQ96KJ4 702 aa12.42□□□□□ -0.42
HLA-B-254ENST00000497377 SUSD3Q96L08 255 aa12.42□□□□□ -0.42
HLA-B-254ENST00000497377 FBXL18Q96ME1 805 aa12.42□□□□□ -0.42
HLA-B-254ENST00000497377 KLHL5Q96PQ7 755 aa12.42□□□□□ -0.42
HLA-B-254ENST00000497377 PCIF1Q9H4Z3 704 aa12.42□□□□□ -0.42
HLA-B-254ENST00000497377 DZANK1Q9NVP4 752 aa12.42□□□□□ -0.42
HLA-B-254ENST00000497377 HSPBP1Q9NZL4 362 aa12.42□□□□□ -0.42
HLA-B-254ENST00000497377 TUBGCP4Q9UGJ1 667 aa12.42□□□□□ -0.42
HLA-B-254ENST00000497377 CD207Q9UJ71 328 aa12.42□□□□□ -0.42
HLA-B-254ENST00000497377 VPS9D1Q9Y2B5 631 aa12.42□□□□□ -0.42
HLA-B-254ENST00000497377 ARHGEF37A1IGU5 675 aa12.41□□□□□ -0.42
HLA-B-254ENST00000497377 H3BQ06 376 aaPredicted RBP12.41□□□□□ -0.42
HLA-B-254ENST00000497377 PDXKO00764 312 aa12.41□□□□□ -0.42
HLA-B-254ENST00000497377 TEX28O15482 410 aa12.41□□□□□ -0.42
HLA-B-254ENST00000497377 NFICP08651 508 aa12.41□□□□□ -0.42
HLA-B-254ENST00000497377 BMP1P13497 986 aa12.41□□□□□ -0.42
HLA-B-254ENST00000497377 CLCN4P51793 760 aa12.41□□□□□ -0.42
HLA-B-254ENST00000497377 SPAG1Q07617 926 aa12.41□□□□□ -0.42
HLA-B-254ENST00000497377 DLX2Q07687 328 aaPredicted RBP12.41□□□□□ -0.42
HLA-B-254ENST00000497377 SMAD4Q13485 552 aaKnown RBP12.41□□□□□ -0.42
HLA-B-254ENST00000497377 MYBPC2Q14324 1141 aa12.41□□□□□ -0.42
HLA-B-254ENST00000497377 ANKRD54Q6NXT1 300 aa12.41□□□□□ -0.42
HLA-B-254ENST00000497377 CD300LGQ6UXG3 332 aa12.41□□□□□ -0.42
HLA-B-254ENST00000497377 ANKS3Q6ZW76 656 aa12.41□□□□□ -0.42
HLA-B-254ENST00000497377 CEP57Q86XR8 500 aa12.41□□□□□ -0.42
HLA-B-254ENST00000497377 SLC9A9Q8IVB4 645 aa12.41□□□□□ -0.42
HLA-B-254ENST00000497377 GUF1Q8N442 669 aaKnown RBP12.41□□□□□ -0.42
HLA-B-254ENST00000497377 XXYLT1Q8NBI6 393 aa12.41□□□□□ -0.42
HLA-B-254ENST00000497377 SMRP1Q8NCR6 262 aa12.41□□□□□ -0.42
HLA-B-254ENST00000497377 C3orf58Q8NDZ4 430 aa12.41□□□□□ -0.42
HLA-B-254ENST00000497377 APPL2Q8NEU8 664 aa12.41□□□□□ -0.42
HLA-B-254ENST00000497377 VN1R2Q8NFZ6 395 aa12.41□□□□□ -0.42
HLA-B-254ENST00000497377 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.41□□□□□ -0.42
HLA-B-254ENST00000497377 HDAC7Q8WUI4 952 aa12.41□□□□□ -0.42
HLA-B-254ENST00000497377 CLEC1BQ9P126 229 aa12.41□□□□□ -0.42
HLA-B-254ENST00000497377 BARX2Q9UMQ3 279 aaPredicted RBP12.41□□□□□ -0.42
HLA-B-254ENST00000497377 VWA8A3KMH1 1905 aa12.41□□□□□ -0.42
HLA-B-254ENST00000497377 ANO9A1A5B4 782 aa12.4□□□□□ -0.42
HLA-B-254ENST00000497377 GOLGA8IPA6NC78 632 aa12.4□□□□□ -0.42
HLA-B-254ENST00000497377 GRXCR2A6NFK2 248 aa12.4□□□□□ -0.42
HLA-B-254ENST00000497377 GOLGA8JA6NMD2 632 aa12.4□□□□□ -0.42
HLA-B-254ENST00000497377 GLUD1P00367 558 aa12.4□□□□□ -0.42
HLA-B-254ENST00000497377 MCM4P33991 863 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms