RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 CPNE8Q86YQ8 564 aa2.91□□□□□ -1.94
CKS1BP2-201ENST00000497342 CILP2Q8IUL8 1156 aa2.91□□□□□ -1.94
CKS1BP2-201ENST00000497342 SIRT2Q8IXJ6 389 aa2.91□□□□□ -1.94
CKS1BP2-201ENST00000497342 AGGF1Q8N302 714 aaeCLIP2.91□□□□□ -1.94
CKS1BP2-201ENST00000497342 CAMKK1Q8N5S9 505 aa2.91□□□□□ -1.94
CKS1BP2-201ENST00000497342 C7orf31Q8N865 590 aa2.91□□□□□ -1.94
CKS1BP2-201ENST00000497342 NETO2Q8NC67 525 aa2.91□□□□□ -1.94
CKS1BP2-201ENST00000497342 IL31RAQ8NI17 732 aa2.91□□□□□ -1.94
CKS1BP2-201ENST00000497342 CD99L2Q8TCZ2 262 aa2.91□□□□□ -1.94
CKS1BP2-201ENST00000497342 TGFBRAP1Q8WUH2 860 aa2.91□□□□□ -1.94
CKS1BP2-201ENST00000497342 WFDC12Q8WWY7 111 aa2.91□□□□□ -1.94
CKS1BP2-201ENST00000497342 IRF7Q92985 503 aa2.91□□□□□ -1.94
CKS1BP2-201ENST00000497342 KIAA1191Q96A73 305 aa2.91□□□□□ -1.94
CKS1BP2-201ENST00000497342 EID2BQ96D98 161 aa2.91□□□□□ -1.94
CKS1BP2-201ENST00000497342 SUCLG2Q96I99 432 aa2.91□□□□□ -1.94
CKS1BP2-201ENST00000497342 MAP6Q96JE9 813 aa2.91□□□□□ -1.94
CKS1BP2-201ENST00000497342 MRGPRX4Q96LA9 322 aa2.91□□□□□ -1.94
CKS1BP2-201ENST00000497342 UBXN10Q96LJ8 280 aa2.91□□□□□ -1.94
CKS1BP2-201ENST00000497342 SAMD11Q96NU1 681 aa2.91□□□□□ -1.94
CKS1BP2-201ENST00000497342 PRAM1Q96QH2 718 aa2.91□□□□□ -1.94
CKS1BP2-201ENST00000497342 NACC1Q96RE7 527 aa2.91□□□□□ -1.94
CKS1BP2-201ENST00000497342 HNRNPABQ99729 332 aaKnown RBP2.91□□□□□ -1.94
CKS1BP2-201ENST00000497342 TREX2Q9BQ50 279 aaPredicted RBP2.91□□□□□ -1.94
CKS1BP2-201ENST00000497342 EIF2AQ9BY44 585 aaKnown RBP2.91□□□□□ -1.94
CKS1BP2-201ENST00000497342 FOXP3Q9BZS1 431 aa2.91□□□□□ -1.94
CKS1BP2-201ENST00000497342 QRSL1Q9H0R6 528 aaKnown RBP2.91□□□□□ -1.94
CKS1BP2-201ENST00000497342 GREM2Q9H772 168 aa2.91□□□□□ -1.94
CKS1BP2-201ENST00000497342 KIAA1586Q9HCI6 787 aa2.91□□□□□ -1.94
CKS1BP2-201ENST00000497342 EPB41L4AQ9HCS5 686 aaPredicted RBP2.91□□□□□ -1.94
CKS1BP2-201ENST00000497342 CALCOCO1Q9P1Z2 691 aa2.91□□□□□ -1.94
CKS1BP2-201ENST00000497342 MYO1AQ9UBC5 1043 aa2.91□□□□□ -1.94
CKS1BP2-201ENST00000497342 POLG2Q9UHN1 485 aa2.91□□□□□ -1.94
CKS1BP2-201ENST00000497342 ASAP1Q9ULH1 1129 aa2.91□□□□□ -1.94
CKS1BP2-201ENST00000497342 SLC45A1Q9Y2W3 748 aa2.91□□□□□ -1.94
CKS1BP2-201ENST00000497342 PAXBP1Q9Y5B6 917 aa2.91□□□□□ -1.94
CKS1BP2-201ENST00000497342 PCDHGB6Q9Y5F9 930 aa2.91□□□□□ -1.94
CKS1BP2-201ENST00000497342 C2CD3Q4AC94 2353 aa2.91□□□□□ -1.94
CKS1BP2-201ENST00000497342 NBEAQ8NFP9 2946 aa2.91□□□□□ -1.94
CKS1BP2-201ENST00000497342 CHD9Q3L8U1 2897 aa2.9□□□□□ -1.94
CKS1BP2-201ENST00000497342 MRC1P22897 1456 aa2.9□□□□□ -1.94
CKS1BP2-201ENST00000497342 SMG1Q96Q15 3661 aaKnown RBP2.9□□□□□ -1.94
CKS1BP2-201ENST00000497342 ANKRD30AQ9BXX3 1397 aa2.9□□□□□ -1.94
CKS1BP2-201ENST00000497342 RGPD5Q99666 1765 aa2.9□□□□□ -1.94
CKS1BP2-201ENST00000497342 DSPP15924 2871 aaKnown RBP2.9□□□□□ -1.95
CKS1BP2-201ENST00000497342 CCDC154A6NI56 674 aa2.9□□□□□ -1.95
CKS1BP2-201ENST00000497342 RHPN2P1A8MT19 583 aa2.9□□□□□ -1.95
CKS1BP2-201ENST00000497342 GNAT3A8MTJ3 354 aa2.9□□□□□ -1.95
CKS1BP2-201ENST00000497342 FAM171A2A8MVW0 826 aa2.9□□□□□ -1.95
CKS1BP2-201ENST00000497342 C22orf46C9J442 243 aa2.9□□□□□ -1.95
CKS1BP2-201ENST00000497342 ACOT7O00154 380 aa2.9□□□□□ -1.95
CKS1BP2-201ENST00000497342 MEIS1O00470 390 aa2.9□□□□□ -1.95
CKS1BP2-201ENST00000497342 SCDO00767 359 aa2.9□□□□□ -1.95
CKS1BP2-201ENST00000497342 HGSO14964 777 aaPredicted RBP2.9□□□□□ -1.95
CKS1BP2-201ENST00000497342 HNRNPDLO14979 420 aaKnown RBP2.9□□□□□ -1.95
CKS1BP2-201ENST00000497342 SART1O43290 800 aaKnown RBP2.9□□□□□ -1.95
CKS1BP2-201ENST00000497342 SRGAP3O43295 1099 aa2.9□□□□□ -1.95
CKS1BP2-201ENST00000497342 ZNF500O60304 480 aaPredicted RBP2.9□□□□□ -1.95
CKS1BP2-201ENST00000497342 BAIAP3O94812 1187 aa2.9□□□□□ -1.95
CKS1BP2-201ENST00000497342 PRPF6O94906 941 aaKnown RBP2.9□□□□□ -1.95
CKS1BP2-201ENST00000497342 IL18RAPO95256 599 aa2.9□□□□□ -1.95
CKS1BP2-201ENST00000497342 CBX7O95931 251 aa2.9□□□□□ -1.95
CKS1BP2-201ENST00000497342 TMEM253P0C7T8 217 aa2.9□□□□□ -1.95
CKS1BP2-201ENST00000497342 GLI4P10075 376 aa2.9□□□□□ -1.95
CKS1BP2-201ENST00000497342 BMP3P12645 472 aa2.9□□□□□ -1.95
CKS1BP2-201ENST00000497342 SYN1P17600 705 aa2.9□□□□□ -1.95
CKS1BP2-201ENST00000497342 FPR2P25090 351 aa2.9□□□□□ -1.95
CKS1BP2-201ENST00000497342 CHKAP35790 457 aa2.9□□□□□ -1.95
CKS1BP2-201ENST00000497342 TECP42680 631 aa2.9□□□□□ -1.95
CKS1BP2-201ENST00000497342 HSPA7P48741 367 aa2.9□□□□□ -1.95
CKS1BP2-201ENST00000497342 FOXO4P98177 505 aa2.9□□□□□ -1.95
CKS1BP2-201ENST00000497342 LAPTM5Q13571 262 aa2.9□□□□□ -1.95
CKS1BP2-201ENST00000497342 MBTPS1Q14703 1052 aa2.9□□□□□ -1.95
CKS1BP2-201ENST00000497342 STILQ15468 1287 aa2.9□□□□□ -1.95
CKS1BP2-201ENST00000497342 CLUL1Q15846 466 aa2.9□□□□□ -1.95
CKS1BP2-201ENST00000497342 MPEG1Q2M385 716 aa2.9□□□□□ -1.95
CKS1BP2-201ENST00000497342 UAP1L1Q3KQV9 507 aa2.9□□□□□ -1.95
CKS1BP2-201ENST00000497342 C3orf36Q3SXR2 165 aa2.9□□□□□ -1.95
CKS1BP2-201ENST00000497342 PRRT3Q5FWE3 981 aa2.9□□□□□ -1.95
CKS1BP2-201ENST00000497342 FAM209BQ5JX69 171 aa2.9□□□□□ -1.95
CKS1BP2-201ENST00000497342 FKBP15Q5T1M5 1219 aa2.9□□□□□ -1.95
CKS1BP2-201ENST00000497342 AKNAD1Q5T1N1 836 aa2.9□□□□□ -1.95
CKS1BP2-201ENST00000497342 SPATA1Q5VX52 437 aa2.9□□□□□ -1.95
CKS1BP2-201ENST00000497342 CPZQ66K79 652 aa2.9□□□□□ -1.95
CKS1BP2-201ENST00000497342 TIGD7Q6NT04 549 aaPredicted RBP2.9□□□□□ -1.95
CKS1BP2-201ENST00000497342 PGBD2Q6P3X8 592 aa2.9□□□□□ -1.95
CKS1BP2-201ENST00000497342 PDXDC1Q6P996 788 aa2.9□□□□□ -1.95
CKS1BP2-201ENST00000497342 DGLUCYQ7Z3D6 616 aa2.9□□□□□ -1.95
CKS1BP2-201ENST00000497342 DAAM2Q86T65 1068 aa2.9□□□□□ -1.95
CKS1BP2-201ENST00000497342 DRC7Q8IY82 874 aa2.9□□□□□ -1.95
CKS1BP2-201ENST00000497342 PRSS33Q8NF86 280 aa2.9□□□□□ -1.95
CKS1BP2-201ENST00000497342 SPPL3Q8TCT6 385 aa2.9□□□□□ -1.95
CKS1BP2-201ENST00000497342 SEC14L1Q92503 715 aa2.9□□□□□ -1.95
CKS1BP2-201ENST00000497342 CCT6BQ92526 530 aa2.9□□□□□ -1.95
CKS1BP2-201ENST00000497342 RPGRQ92834 1020 aaKnown RBP2.9□□□□□ -1.95
CKS1BP2-201ENST00000497342 ZNF622Q969S3 477 aaKnown RBP eCLIP2.9□□□□□ -1.95
CKS1BP2-201ENST00000497342 HDAC10Q969S8 669 aa2.9□□□□□ -1.95
CKS1BP2-201ENST00000497342 TBC1D20Q96BZ9 403 aa2.9□□□□□ -1.95
CKS1BP2-201ENST00000497342 NMD3Q96D46 503 aaKnown RBP2.9□□□□□ -1.95
CKS1BP2-201ENST00000497342 ERP27Q96DN0 273 aa2.9□□□□□ -1.95
CKS1BP2-201ENST00000497342 DDX11Q96FC9 970 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms