RNA–Protein interactions for RNA: ENST00000495817.1

CCDC39-207, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 1,047 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-207ENST00000495817 ALDH5A1P51649 535 aaPredicted RBP7.25□□□□□ -1.25
CCDC39-207ENST00000495817 CTXN1P60606 82 aa7.25□□□□□ -1.25
CCDC39-207ENST00000495817 PTH1RQ03431 593 aa7.25□□□□□ -1.25
CCDC39-207ENST00000495817 MTM1Q13496 603 aa7.25□□□□□ -1.25
CCDC39-207ENST00000495817 C1QL3Q5VWW1 255 aa7.25□□□□□ -1.25
CCDC39-207ENST00000495817 SLC35A4Q96G79 324 aa7.25□□□□□ -1.25
CCDC39-207ENST00000495817 MNTQ99583 582 aa7.25□□□□□ -1.25
CCDC39-207ENST00000495817 MYD88Q99836 296 aa7.25□□□□□ -1.25
CCDC39-207ENST00000495817 VRK1Q99986 396 aaPredicted RBP7.25□□□□□ -1.25
CCDC39-207ENST00000495817 WDCPQ9H6R7 721 aa7.25□□□□□ -1.25
CCDC39-207ENST00000495817 NLRC4Q9NPP4 1024 aa7.25□□□□□ -1.25
CCDC39-207ENST00000495817 CEP72Q9P209 647 aa7.25□□□□□ -1.25
CCDC39-207ENST00000495817 PRR5-ARHGAP8B1AHC4 643 aa7.24□□□□□ -1.25
CCDC39-207ENST00000495817 TEX33O43247 280 aa7.24□□□□□ -1.25
CCDC39-207ENST00000495817 SMARCA1P28370 1054 aa7.24□□□□□ -1.25
CCDC39-207ENST00000495817 IFIT5Q13325 482 aaKnown RBP7.24□□□□□ -1.25
CCDC39-207ENST00000495817 SP140Q13342 867 aa7.24□□□□□ -1.25
CCDC39-207ENST00000495817 SNAPC2Q13487 334 aa7.24□□□□□ -1.25
CCDC39-207ENST00000495817 PLS1Q14651 629 aa7.24□□□□□ -1.25
CCDC39-207ENST00000495817 PRAMEF14Q5SWL7 426 aa7.24□□□□□ -1.25
CCDC39-207ENST00000495817 DRICH1Q6PGQ1 229 aaPredicted RBP7.24□□□□□ -1.25
CCDC39-207ENST00000495817 APOA5Q6Q788 366 aa7.24□□□□□ -1.25
CCDC39-207ENST00000495817 GPRIN1Q7Z2K8 1008 aa7.24□□□□□ -1.25
CCDC39-207ENST00000495817 ZNF572Q7Z3I7 529 aaPredicted RBP7.24□□□□□ -1.25
CCDC39-207ENST00000495817 FAM186BQ8IYM0 893 aa7.24□□□□□ -1.25
CCDC39-207ENST00000495817 ZGPATQ8N5A5 531 aaKnown RBP7.24□□□□□ -1.25
CCDC39-207ENST00000495817 RAB24Q969Q5 203 aa7.24□□□□□ -1.25
CCDC39-207ENST00000495817 APIPQ96GX9 242 aa7.24□□□□□ -1.25
CCDC39-207ENST00000495817 LSM14BQ9BX40 385 aaKnown RBP7.24□□□□□ -1.25
CCDC39-207ENST00000495817 C22orf23Q9BZE7 217 aa7.24□□□□□ -1.25
CCDC39-207ENST00000495817 LRRC27Q9C0I9 530 aa7.24□□□□□ -1.25
CCDC39-207ENST00000495817 BTBD1Q9H0C5 482 aa7.24□□□□□ -1.25
CCDC39-207ENST00000495817 ATP6V0A4Q9HBG4 840 aa7.24□□□□□ -1.25
CCDC39-207ENST00000495817 ABCF2Q9UG63 623 aa7.24□□□□□ -1.25
CCDC39-207ENST00000495817 FEZ2Q9UHY8 353 aaPredicted RBP7.24□□□□□ -1.25
CCDC39-207ENST00000495817 TAGLN3Q9UI15 199 aa7.24□□□□□ -1.25
CCDC39-207ENST00000495817 AJAP1Q9UKB5 411 aaPredicted RBP7.24□□□□□ -1.25
CCDC39-207ENST00000495817 TPCN1Q9ULQ1 816 aa7.24□□□□□ -1.25
CCDC39-207ENST00000495817 XDHP47989 1333 aa7.24□□□□□ -1.25
CCDC39-207ENST00000495817 TRIM24O15164 1050 aa7.23□□□□□ -1.25
CCDC39-207ENST00000495817 PJA2O43164 708 aa7.23□□□□□ -1.25
CCDC39-207ENST00000495817 MYF5P13349 255 aa7.23□□□□□ -1.25
CCDC39-207ENST00000495817 C6P13671 934 aa7.23□□□□□ -1.25
CCDC39-207ENST00000495817 MGAT1P26572 445 aa7.23□□□□□ -1.25
CCDC39-207ENST00000495817 ZXDAP98168 799 aa7.23□□□□□ -1.25
CCDC39-207ENST00000495817 TOB2Q14106 344 aaPredicted RBP7.23□□□□□ -1.25
CCDC39-207ENST00000495817 PARD3BQ8TEW8 1205 aa7.23□□□□□ -1.25
CCDC39-207ENST00000495817 ANKS1AQ92625 1134 aa7.23□□□□□ -1.25
CCDC39-207ENST00000495817 PGBD4Q96DM1 585 aa7.23□□□□□ -1.25
CCDC39-207ENST00000495817 CPEB1Q9BZB8 566 aaKnown RBP7.23□□□□□ -1.25
CCDC39-207ENST00000495817 LDAHQ9H6V9 325 aa7.23□□□□□ -1.25
CCDC39-207ENST00000495817 ARMT1Q9H993 441 aa7.23□□□□□ -1.25
CCDC39-207ENST00000495817 MOCS1Q9NZB8 636 aa7.23□□□□□ -1.25
CCDC39-207ENST00000495817 NT5C1B-RDH14C9J2C7 533 aa7.22□□□□□ -1.25
CCDC39-207ENST00000495817 FOXN3O00409 490 aaPredicted RBP7.22□□□□□ -1.25
CCDC39-207ENST00000495817 IFRD1O00458 451 aaPredicted RBP7.22□□□□□ -1.25
CCDC39-207ENST00000495817 PLSCR1O15162 318 aa7.22□□□□□ -1.25
CCDC39-207ENST00000495817 FZD7O75084 574 aa7.22□□□□□ -1.25
CCDC39-207ENST00000495817 MYL3P08590 195 aa7.22□□□□□ -1.25
CCDC39-207ENST00000495817 ZKSCAN1P17029 563 aaPredicted RBP7.22□□□□□ -1.25
CCDC39-207ENST00000495817 PTPN7P35236 360 aa7.22□□□□□ -1.25
CCDC39-207ENST00000495817 LONRF1Q17RB8 773 aa7.22□□□□□ -1.25
CCDC39-207ENST00000495817 FAM47AQ5JRC9 791 aa7.22□□□□□ -1.25
CCDC39-207ENST00000495817 USP51Q70EK9 711 aa7.22□□□□□ -1.25
CCDC39-207ENST00000495817 SRLQ86TD4 932 aa7.22□□□□□ -1.25
CCDC39-207ENST00000495817 REPS2Q8NFH8 660 aa7.22□□□□□ -1.25
CCDC39-207ENST00000495817 IL31RAQ8NI17 732 aa7.22□□□□□ -1.25
CCDC39-207ENST00000495817 MDM1Q8TC05 714 aa7.22□□□□□ -1.25
CCDC39-207ENST00000495817 PHKBQ93100 1093 aa7.22□□□□□ -1.25
CCDC39-207ENST00000495817 PLEKHG4BQ96PX9 1271 aa7.22□□□□□ -1.25
CCDC39-207ENST00000495817 ZMAT3Q9HA38 289 aaKnown RBP7.22□□□□□ -1.25
CCDC39-207ENST00000495817 SIDT1Q9NXL6 827 aaKnown RBP7.22□□□□□ -1.25
CCDC39-207ENST00000495817 ZMYM3Q14202 1370 aa7.21□□□□□ -1.25
CCDC39-207ENST00000495817 ATRNL1Q5VV63 1379 aa7.21□□□□□ -1.25
CCDC39-207ENST00000495817 A0A1W2PPL8 197 aa7.21□□□□□ -1.26
CCDC39-207ENST00000495817 ISM1B1AKI9 464 aa7.21□□□□□ -1.26
CCDC39-207ENST00000495817 PPFIA4O75335 1185 aa7.21□□□□□ -1.26
CCDC39-207ENST00000495817 RECQL4O94761 1208 aa7.21□□□□□ -1.26
CCDC39-207ENST00000495817 AMHP03971 560 aa7.21□□□□□ -1.26
CCDC39-207ENST00000495817 C1SP09871 688 aa7.21□□□□□ -1.26
CCDC39-207ENST00000495817 ALOX15P16050 662 aaPredicted RBP7.21□□□□□ -1.26
CCDC39-207ENST00000495817 HK1P19367 917 aa7.21□□□□□ -1.26
CCDC39-207ENST00000495817 PCSK1P29120 753 aa7.21□□□□□ -1.26
CCDC39-207ENST00000495817 SERPINB3P29508 390 aa7.21□□□□□ -1.26
CCDC39-207ENST00000495817 TUBA3CQ13748 450 aa7.21□□□□□ -1.26
CCDC39-207ENST00000495817 ATP2B3Q16720 1220 aa7.21□□□□□ -1.26
CCDC39-207ENST00000495817 FLYWCH1Q4VC44 716 aa7.21□□□□□ -1.26
CCDC39-207ENST00000495817 RABL3Q5HYI8 236 aa7.21□□□□□ -1.26
CCDC39-207ENST00000495817 TUBA3EQ6PEY2 450 aa7.21□□□□□ -1.26
CCDC39-207ENST00000495817 DPP9Q86TI2 863 aa7.21□□□□□ -1.26
CCDC39-207ENST00000495817 ZFP28Q8NHY6 868 aa7.21□□□□□ -1.26
CCDC39-207ENST00000495817 NT5C1BQ96P26 610 aa7.21□□□□□ -1.26
CCDC39-207ENST00000495817 ARPC5LQ9BPX5 153 aa7.21□□□□□ -1.26
CCDC39-207ENST00000495817 APOL5Q9BWW9 433 aa7.21□□□□□ -1.26
CCDC39-207ENST00000495817 ZNF341Q9BYN7 854 aa7.21□□□□□ -1.26
CCDC39-207ENST00000495817 SARS2Q9NP81 518 aaKnown RBP7.21□□□□□ -1.26
CCDC39-207ENST00000495817 DAAM1Q9Y4D1 1078 aa7.21□□□□□ -1.26
CCDC39-207ENST00000495817 TBKBP1A7MCY6 615 aa7.2□□□□□ -1.26
CCDC39-207ENST00000495817 SNRPA1P09661 255 aaKnown RBP7.2□□□□□ -1.26
CCDC39-207ENST00000495817 PRDX5P30044 214 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms