RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 CTSAP10619 480 aa12.02□□□□□ -0.49
APTX-230ENST00000494649 RPL13P26373 211 aaKnown RBP12.02□□□□□ -0.49
APTX-230ENST00000494649 GLUD2P49448 558 aa12.02□□□□□ -0.49
APTX-230ENST00000494649 UBE3AQ05086 875 aa12.02□□□□□ -0.49
APTX-230ENST00000494649 PSMD6Q15008 389 aa12.02□□□□□ -0.49
APTX-230ENST00000494649 PTPN14Q15678 1187 aa12.02□□□□□ -0.49
APTX-230ENST00000494649 CCDC183Q5T5S1 534 aa12.02□□□□□ -0.49
APTX-230ENST00000494649 SLC9A9Q8IVB4 645 aa12.02□□□□□ -0.49
APTX-230ENST00000494649 TRIML1Q8N9V2 468 aa12.02□□□□□ -0.49
APTX-230ENST00000494649 DDX27Q96GQ7 796 aaKnown RBP12.02□□□□□ -0.49
APTX-230ENST00000494649 DHTKD1Q96HY7 919 aaPredicted RBP12.02□□□□□ -0.49
APTX-230ENST00000494649 ANKRD36BP1Q96IX9 119 aa12.02□□□□□ -0.49
APTX-230ENST00000494649 MFSD14AQ96MC6 490 aa12.02□□□□□ -0.49
APTX-230ENST00000494649 DUSP9Q99956 384 aaKnown RBP12.02□□□□□ -0.49
APTX-230ENST00000494649 TLE6Q9H808 572 aa12.02□□□□□ -0.49
APTX-230ENST00000494649 MRPL17Q9NRX2 175 aaKnown RBP12.02□□□□□ -0.49
APTX-230ENST00000494649 INTS13Q9NVM9 706 aa12.02□□□□□ -0.49
APTX-230ENST00000494649 LZTS1Q9Y250 596 aa12.02□□□□□ -0.49
APTX-230ENST00000494649 A0A0C4DFX4 3053 aa12.01□□□□□ -0.49
APTX-230ENST00000494649 FSCN2O14926 492 aa12.01□□□□□ -0.49
APTX-230ENST00000494649 CETN3O15182 167 aa12.01□□□□□ -0.49
APTX-230ENST00000494649 SPATA31D3P0C874 917 aa12.01□□□□□ -0.49
APTX-230ENST00000494649 LRPAP1P30533 357 aa12.01□□□□□ -0.49
APTX-230ENST00000494649 RPL9P32969 192 aaKnown RBP12.01□□□□□ -0.49
APTX-230ENST00000494649 HYAL1Q12794 435 aa12.01□□□□□ -0.49
APTX-230ENST00000494649 BIRC3Q13489 604 aa12.01□□□□□ -0.49
APTX-230ENST00000494649 SMC1AQ14683 1233 aaKnown RBP12.01□□□□□ -0.49
APTX-230ENST00000494649 CLUL1Q15846 466 aa12.01□□□□□ -0.49
APTX-230ENST00000494649 EDRF1Q3B7T1 1238 aa12.01□□□□□ -0.49
APTX-230ENST00000494649 USP41Q3LFD5 358 aa12.01□□□□□ -0.49
APTX-230ENST00000494649 COBLL1Q53SF7 1204 aa12.01□□□□□ -0.49
APTX-230ENST00000494649 DCAF17Q5H9S7 520 aaPredicted RBP12.01□□□□□ -0.49
APTX-230ENST00000494649 TTI2Q6NXR4 508 aa12.01□□□□□ -0.49
APTX-230ENST00000494649 DSTYKQ6XUX3 929 aa12.01□□□□□ -0.49
APTX-230ENST00000494649 SPATA31D4Q6ZUB0 917 aa12.01□□□□□ -0.49
APTX-230ENST00000494649 MRPL43Q8N983 215 aaKnown RBP12.01□□□□□ -0.49
APTX-230ENST00000494649 PARD3BQ8TEW8 1205 aa12.01□□□□□ -0.49
APTX-230ENST00000494649 MED15Q96RN5 788 aa12.01□□□□□ -0.49
APTX-230ENST00000494649 CGRRF1Q99675 332 aa12.01□□□□□ -0.49
APTX-230ENST00000494649 SIX4Q9UIU6 781 aa12.01□□□□□ -0.49
APTX-230ENST00000494649 DERAQ9Y315 318 aa12.01□□□□□ -0.49
APTX-230ENST00000494649 PIRO00625 290 aa12.01□□□□□ -0.49
APTX-230ENST00000494649 CST3P01034 146 aaPredicted RBP12.01□□□□□ -0.49
APTX-230ENST00000494649 TNNC2P02585 160 aa12.01□□□□□ -0.49
APTX-230ENST00000494649 CNPP09543 421 aaKnown RBP12.01□□□□□ -0.49
APTX-230ENST00000494649 CYP3A5P20815 502 aa12.01□□□□□ -0.49
APTX-230ENST00000494649 PSMC2P35998 433 aaKnown RBP12.01□□□□□ -0.49
APTX-230ENST00000494649 VAMP7P51809 220 aa12.01□□□□□ -0.49
APTX-230ENST00000494649 ARPP19P56211 112 aa12.01□□□□□ -0.49
APTX-230ENST00000494649 LILRA4P59901 499 aa12.01□□□□□ -0.49
APTX-230ENST00000494649 FKBP3Q00688 224 aaKnown RBP12.01□□□□□ -0.49
APTX-230ENST00000494649 DUOXA2Q1HG44 320 aa12.01□□□□□ -0.49
APTX-230ENST00000494649 TCERG1LQ5VWI1 586 aa12.01□□□□□ -0.49
APTX-230ENST00000494649 TRAPPC11Q7Z392 1133 aa12.01□□□□□ -0.49
APTX-230ENST00000494649 PALB2Q86YC2 1186 aa12.01□□□□□ -0.49
APTX-230ENST00000494649 WDR49Q8IV35 697 aa12.01□□□□□ -0.49
APTX-230ENST00000494649 RNF168Q8IYW5 571 aaPredicted RBP12.01□□□□□ -0.49
APTX-230ENST00000494649 CACTINQ8WUQ7 758 aaKnown RBP12.01□□□□□ -0.49
APTX-230ENST00000494649 TTPALQ9BTX7 342 aa12.01□□□□□ -0.49
APTX-230ENST00000494649 HERC2P3Q9BVR0 1158 aa12.01□□□□□ -0.49
APTX-230ENST00000494649 APOL5Q9BWW9 433 aa12.01□□□□□ -0.49
APTX-230ENST00000494649 LMAN2LQ9H0V9 348 aa12.01□□□□□ -0.49
APTX-230ENST00000494649 CLDND1Q9NY35 253 aa12.01□□□□□ -0.49
APTX-230ENST00000494649 SCN1AP35498 2009 aa12□□□□□ -0.49
APTX-230ENST00000494649 TEX28O15482 410 aa12□□□□□ -0.49
APTX-230ENST00000494649 ADAM12O43184 909 aa12□□□□□ -0.49
APTX-230ENST00000494649 PHACTR2O75167 634 aa12□□□□□ -0.49
APTX-230ENST00000494649 LRRN2O75325 713 aa12□□□□□ -0.49
APTX-230ENST00000494649 EFEMP2O95967 443 aa12□□□□□ -0.49
APTX-230ENST00000494649 EPB41P11171 864 aaKnown RBP12□□□□□ -0.49
APTX-230ENST00000494649 GCLMP48507 274 aa12□□□□□ -0.49
APTX-230ENST00000494649 NLRP12P59046 1061 aa12□□□□□ -0.49
APTX-230ENST00000494649 TFF2Q03403 129 aa12□□□□□ -0.49
APTX-230ENST00000494649 LRRC63Q05C16 580 aa12□□□□□ -0.49
APTX-230ENST00000494649 DLX2Q07687 328 aaPredicted RBP12□□□□□ -0.49
APTX-230ENST00000494649 BFSP1Q12934 665 aa12□□□□□ -0.49
APTX-230ENST00000494649 TDRD10Q5VZ19 366 aaKnown RBP12□□□□□ -0.49
APTX-230ENST00000494649 FEZF2Q8TBJ5 459 aa12□□□□□ -0.49
APTX-230ENST00000494649 SRRTQ9BXP5 876 aaKnown RBP12□□□□□ -0.49
APTX-230ENST00000494649 NGRNQ9NPE2 291 aaKnown RBP12□□□□□ -0.49
APTX-230ENST00000494649 CHST7Q9NS84 486 aa12□□□□□ -0.49
APTX-230ENST00000494649 BARX2Q9UMQ3 279 aaPredicted RBP12□□□□□ -0.49
APTX-230ENST00000494649 VWA8A3KMH1 1905 aa12□□□□□ -0.49
APTX-230ENST00000494649 ANO9A1A5B4 782 aa11.99□□□□□ -0.49
APTX-230ENST00000494649 H3BQ06 376 aaPredicted RBP11.99□□□□□ -0.49
APTX-230ENST00000494649 TMEM189-UBE2V1I3L0A0 370 aa11.99□□□□□ -0.49
APTX-230ENST00000494649 TRAPPC3O43617 180 aa11.99□□□□□ -0.49
APTX-230ENST00000494649 KRT13P13646 458 aa11.99□□□□□ -0.49
APTX-230ENST00000494649 POU3F3P20264 500 aaPredicted RBP11.99□□□□□ -0.49
APTX-230ENST00000494649 KLRC2P26717 231 aa11.99□□□□□ -0.49
APTX-230ENST00000494649 DSG1Q02413 1049 aa11.99□□□□□ -0.49
APTX-230ENST00000494649 PPP3CAQ08209 521 aa11.99□□□□□ -0.49
APTX-230ENST00000494649 C1orf220Q5T0J3 134 aa11.99□□□□□ -0.49
APTX-230ENST00000494649 KIAA0319Q5VV43 1072 aa11.99□□□□□ -0.49
APTX-230ENST00000494649 SASS6Q6UVJ0 657 aa11.99□□□□□ -0.49
APTX-230ENST00000494649 RSPO2Q6UXX9 243 aaPredicted RBP11.99□□□□□ -0.49
APTX-230ENST00000494649 C11orf57Q6ZUT1 292 aaPredicted RBP11.99□□□□□ -0.49
APTX-230ENST00000494649 VN1R2Q8NFZ6 395 aa11.99□□□□□ -0.49
APTX-230ENST00000494649 CXorf38Q8TB03 319 aa11.99□□□□□ -0.49
APTX-230ENST00000494649 SENP8Q96LD8 212 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms