RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 CNOT8Q9UFF9 292 aaKnown RBP11.4□□□□□ -0.58
CLCN6-208ENST00000494028 CHORDC1Q9UHD1 332 aaPredicted RBP11.4□□□□□ -0.58
CLCN6-208ENST00000494028 FRMPD3Q5JV73 1810 aa11.39□□□□□ -0.59
CLCN6-208ENST00000494028 MROH7Q68CQ1 1323 aa11.39□□□□□ -0.59
CLCN6-208ENST00000494028 MIF4GDA9UHW6 222 aaKnown RBP11.39□□□□□ -0.59
CLCN6-208ENST00000494028 BHMG1C9JSJ3 638 aaPredicted RBP11.39□□□□□ -0.59
CLCN6-208ENST00000494028 CLSTN1O94985 981 aa11.39□□□□□ -0.59
CLCN6-208ENST00000494028 HEXIM1O94992 359 aaKnown RBP11.39□□□□□ -0.59
CLCN6-208ENST00000494028 CST3P01034 146 aaPredicted RBP11.39□□□□□ -0.59
CLCN6-208ENST00000494028 IGHA2P01877 340 aa11.39□□□□□ -0.59
CLCN6-208ENST00000494028 CFHP08603 1231 aa11.39□□□□□ -0.59
CLCN6-208ENST00000494028 CTNNA2P26232 953 aa11.39□□□□□ -0.59
CLCN6-208ENST00000494028 ZNF157P51786 506 aaPredicted RBP11.39□□□□□ -0.59
CLCN6-208ENST00000494028 OSTNP61366 133 aa11.39□□□□□ -0.59
CLCN6-208ENST00000494028 TFAMQ00059 246 aaKnown RBP11.39□□□□□ -0.59
CLCN6-208ENST00000494028 SLC7A5Q01650 507 aa11.39□□□□□ -0.59
CLCN6-208ENST00000494028 CASP8Q14790 479 aa11.39□□□□□ -0.59
CLCN6-208ENST00000494028 CCL14Q16627 93 aa11.39□□□□□ -0.59
CLCN6-208ENST00000494028 DUOXA2Q1HG44 320 aa11.39□□□□□ -0.59
CLCN6-208ENST00000494028 OLFML2BQ68BL8 750 aa11.39□□□□□ -0.59
CLCN6-208ENST00000494028 SMYD5Q6GMV2 418 aa11.39□□□□□ -0.59
CLCN6-208ENST00000494028 RGMBQ6NW40 437 aa11.39□□□□□ -0.59
CLCN6-208ENST00000494028 C17orf99Q6UX52 265 aa11.39□□□□□ -0.59
CLCN6-208ENST00000494028 HDXQ7Z353 690 aa11.39□□□□□ -0.59
CLCN6-208ENST00000494028 IFNL1Q8IU54 200 aa11.39□□□□□ -0.59
CLCN6-208ENST00000494028 PASD1Q8IV76 773 aa11.39□□□□□ -0.59
CLCN6-208ENST00000494028 MCOLN2Q8IZK6 566 aa11.39□□□□□ -0.59
CLCN6-208ENST00000494028 TMEM130Q8N3G9 435 aa11.39□□□□□ -0.59
CLCN6-208ENST00000494028 NLRP7Q8WX94 980 aa11.39□□□□□ -0.59
CLCN6-208ENST00000494028 SOCS4Q8WXH5 440 aa11.39□□□□□ -0.59
CLCN6-208ENST00000494028 KRT35Q92764 455 aa11.39□□□□□ -0.59
CLCN6-208ENST00000494028 KAT2BQ92831 832 aa11.39□□□□□ -0.59
CLCN6-208ENST00000494028 FAM212AQ96EL1 285 aa11.39□□□□□ -0.59
CLCN6-208ENST00000494028 ANKRD36BP1Q96IX9 119 aa11.39□□□□□ -0.59
CLCN6-208ENST00000494028 RNPC3Q96LT9 517 aaKnown RBP11.39□□□□□ -0.59
CLCN6-208ENST00000494028 KRT12Q99456 494 aa11.39□□□□□ -0.59
CLCN6-208ENST00000494028 RPF1Q9H9Y2 349 aaKnown RBP11.39□□□□□ -0.59
CLCN6-208ENST00000494028 SIX4Q9UIU6 781 aa11.39□□□□□ -0.59
CLCN6-208ENST00000494028 TTC7AQ9ULT0 858 aaPredicted RBP11.39□□□□□ -0.59
CLCN6-208ENST00000494028 ZSCAN5CA6NGD5 496 aaPredicted RBP11.38□□□□□ -0.59
CLCN6-208ENST00000494028 RRN3P2A6NIE6 340 aa11.38□□□□□ -0.59
CLCN6-208ENST00000494028 A6NJR5 290 aa11.38□□□□□ -0.59
CLCN6-208ENST00000494028 H3BQF6 201 aa11.38□□□□□ -0.59
CLCN6-208ENST00000494028 CCDC188H7C350 402 aa11.38□□□□□ -0.59
CLCN6-208ENST00000494028 HAS3O00219 553 aa11.38□□□□□ -0.59
CLCN6-208ENST00000494028 THAP12O43422 761 aa11.38□□□□□ -0.59
CLCN6-208ENST00000494028 RAD51CO43502 376 aa11.38□□□□□ -0.59
CLCN6-208ENST00000494028 CSDE1O75534 798 aaKnown RBP11.38□□□□□ -0.59
CLCN6-208ENST00000494028 ECM2O94769 699 aaPredicted RBP11.38□□□□□ -0.59
CLCN6-208ENST00000494028 STAG3L1P0CL83 205 aa11.38□□□□□ -0.59
CLCN6-208ENST00000494028 SMIM10L2AP0DMW4 78 aa11.38□□□□□ -0.59
CLCN6-208ENST00000494028 SMIM10L2BP0DMW5 78 aa11.38□□□□□ -0.59
CLCN6-208ENST00000494028 MYBL1P10243 752 aa11.38□□□□□ -0.59
CLCN6-208ENST00000494028 COMTP21964 271 aa11.38□□□□□ -0.59
CLCN6-208ENST00000494028 RRM1P23921 792 aa11.38□□□□□ -0.59
CLCN6-208ENST00000494028 TMOD1P28289 359 aa11.38□□□□□ -0.59
CLCN6-208ENST00000494028 CTNNA1P35221 906 aaKnown RBP11.38□□□□□ -0.59
CLCN6-208ENST00000494028 RGS2P41220 211 aa11.38□□□□□ -0.59
CLCN6-208ENST00000494028 RNASE9P60153 205 aaKnown RBP11.38□□□□□ -0.59
CLCN6-208ENST00000494028 IRX5P78411 483 aaPredicted RBP11.38□□□□□ -0.59
CLCN6-208ENST00000494028 POU5F1Q01860 360 aaKnown RBP11.38□□□□□ -0.59
CLCN6-208ENST00000494028 PTP4A2Q12974 167 aa11.38□□□□□ -0.59
CLCN6-208ENST00000494028 MESDQ14696 234 aa11.38□□□□□ -0.59
CLCN6-208ENST00000494028 PRAMEF19Q5SWL8 479 aa11.38□□□□□ -0.59
CLCN6-208ENST00000494028 JADE1Q6IE81 842 aa11.38□□□□□ -0.59
CLCN6-208ENST00000494028 LLGL2Q6P1M3 1020 aa11.38□□□□□ -0.59
CLCN6-208ENST00000494028 CCNI2Q6ZMN8 369 aaPredicted RBP11.38□□□□□ -0.59
CLCN6-208ENST00000494028 SAPCD2Q86UD0 394 aa11.38□□□□□ -0.59
CLCN6-208ENST00000494028 KIAA0319LQ8IZA0 1049 aa11.38□□□□□ -0.59
CLCN6-208ENST00000494028 C1orf127Q8N9H9 656 aa11.38□□□□□ -0.59
CLCN6-208ENST00000494028 CXorf38Q8TB03 319 aa11.38□□□□□ -0.59
CLCN6-208ENST00000494028 BTBD6Q96KE9 485 aa11.38□□□□□ -0.59
CLCN6-208ENST00000494028 SCLT1Q96NL6 688 aa11.38□□□□□ -0.59
CLCN6-208ENST00000494028 RPS6KC1Q96S38 1066 aa11.38□□□□□ -0.59
CLCN6-208ENST00000494028 C11orf70Q9BRQ4 267 aa11.38□□□□□ -0.59
CLCN6-208ENST00000494028 GDF3Q9NR23 364 aa11.38□□□□□ -0.59
CLCN6-208ENST00000494028 CISHQ9NSE2 258 aa11.38□□□□□ -0.59
CLCN6-208ENST00000494028 POLIQ9UNA4 740 aa11.38□□□□□ -0.59
CLCN6-208ENST00000494028 ALG6Q9Y672 507 aa11.38□□□□□ -0.59
CLCN6-208ENST00000494028 TSC2P49815 1807 aa11.37□□□□□ -0.59
CLCN6-208ENST00000494028 SCN1AP35498 2009 aa11.37□□□□□ -0.59
CLCN6-208ENST00000494028 MBLAC1A4D2B0 266 aaPredicted RBP11.37□□□□□ -0.59
CLCN6-208ENST00000494028 LACTBL1A8MY62 500 aa11.37□□□□□ -0.59
CLCN6-208ENST00000494028 FAM155AB1AL88 458 aaPredicted RBP11.37□□□□□ -0.59
CLCN6-208ENST00000494028 ERLIN2O94905 339 aa11.37□□□□□ -0.59
CLCN6-208ENST00000494028 ITGA4P13612 1032 aa11.37□□□□□ -0.59
CLCN6-208ENST00000494028 CD58P19256 250 aa11.37□□□□□ -0.59
CLCN6-208ENST00000494028 BRD2P25440 801 aaKnown RBP11.37□□□□□ -0.59
CLCN6-208ENST00000494028 OAS2P29728 719 aaKnown RBP11.37□□□□□ -0.59
CLCN6-208ENST00000494028 SSTR3P32745 418 aaPredicted RBP11.37□□□□□ -0.59
CLCN6-208ENST00000494028 CYP2C19P33261 490 aa11.37□□□□□ -0.59
CLCN6-208ENST00000494028 GRM5P41594 1212 aa11.37□□□□□ -0.59
CLCN6-208ENST00000494028 TNNT3P45378 269 aaPredicted RBP11.37□□□□□ -0.59
CLCN6-208ENST00000494028 NSFP46459 744 aaKnown RBP11.37□□□□□ -0.59
CLCN6-208ENST00000494028 PSEN2P49810 448 aa11.37□□□□□ -0.59
CLCN6-208ENST00000494028 ZNF211Q13398 564 aaPredicted RBP11.37□□□□□ -0.59
CLCN6-208ENST00000494028 TRPC3Q13507 836 aa11.37□□□□□ -0.59
CLCN6-208ENST00000494028 HIC1Q14526 733 aa11.37□□□□□ -0.59
CLCN6-208ENST00000494028 MFSD10Q14728 455 aa11.37□□□□□ -0.59
CLCN6-208ENST00000494028 KYAT1Q16773 422 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms