RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 USP17L24Q0WX57 530 aa12.39□□□□□ -0.43
HDAC4-210ENST00000493582 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.39□□□□□ -0.43
HDAC4-210ENST00000493582 USP17L6PQ6QN14 398 aa12.39□□□□□ -0.43
HDAC4-210ENST00000493582 ZNF804AQ7Z570 1209 aa12.39□□□□□ -0.43
HDAC4-210ENST00000493582 SATL1Q86VE3 508 aa12.39□□□□□ -0.43
HDAC4-210ENST00000493582 SYT2Q8N9I0 419 aaPredicted RBP12.39□□□□□ -0.43
HDAC4-210ENST00000493582 PSPC1Q8WXF1 523 aaKnown RBP12.39□□□□□ -0.43
HDAC4-210ENST00000493582 MPP4Q96JB8 637 aa12.39□□□□□ -0.43
HDAC4-210ENST00000493582 BHMT2Q9H2M3 363 aa12.39□□□□□ -0.43
HDAC4-210ENST00000493582 TYROBPO43914 113 aa12.39□□□□□ -0.43
HDAC4-210ENST00000493582 SGPL1O95470 568 aa12.39□□□□□ -0.43
HDAC4-210ENST00000493582 ASLP04424 464 aa12.39□□□□□ -0.43
HDAC4-210ENST00000493582 HARSP12081 509 aaKnown RBP12.39□□□□□ -0.43
HDAC4-210ENST00000493582 PLS3P13797 630 aa12.39□□□□□ -0.43
HDAC4-210ENST00000493582 VAV1P15498 845 aa12.39□□□□□ -0.43
HDAC4-210ENST00000493582 HIBADHP31937 336 aaKnown RBP12.39□□□□□ -0.43
HDAC4-210ENST00000493582 PCNX4Q63HM2 1172 aa12.39□□□□□ -0.43
HDAC4-210ENST00000493582 TXNRD3Q86VQ6 643 aa12.39□□□□□ -0.43
HDAC4-210ENST00000493582 LRRC47Q8N1G4 583 aaKnown RBP12.39□□□□□ -0.43
HDAC4-210ENST00000493582 SLC25A41Q8N5S1 370 aa12.39□□□□□ -0.43
HDAC4-210ENST00000493582 CFAP61Q8NHU2 1237 aa12.39□□□□□ -0.43
HDAC4-210ENST00000493582 CELF1Q92879 486 aaKnown RBP12.39□□□□□ -0.43
HDAC4-210ENST00000493582 KAT5Q92993 513 aa12.39□□□□□ -0.43
HDAC4-210ENST00000493582 AGBL1Q96MI9 1066 aa12.39□□□□□ -0.43
HDAC4-210ENST00000493582 KCNQ5Q9NR82 932 aa12.39□□□□□ -0.43
HDAC4-210ENST00000493582 SMG5Q9UPR3 1016 aaKnown RBP12.39□□□□□ -0.43
HDAC4-210ENST00000493582 ZNF510Q9Y2H8 683 aa12.39□□□□□ -0.43
HDAC4-210ENST00000493582 KIAA1551Q9HCM1 1747 aa12.39□□□□□ -0.43
HDAC4-210ENST00000493582 TOGARAM1Q9Y4F4 1720 aa12.39□□□□□ -0.43
HDAC4-210ENST00000493582 SPATA31A1Q5TZJ5 1347 aa12.38□□□□□ -0.43
HDAC4-210ENST00000493582 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.38□□□□□ -0.43
HDAC4-210ENST00000493582 GOLGA8RI6L899 631 aa12.38□□□□□ -0.43
HDAC4-210ENST00000493582 MYL7Q01449 175 aa12.38□□□□□ -0.43
HDAC4-210ENST00000493582 CDC16Q13042 620 aa12.38□□□□□ -0.43
HDAC4-210ENST00000493582 ARHGEF19Q8IW93 802 aa12.38□□□□□ -0.43
HDAC4-210ENST00000493582 NTSR2O95665 410 aa12.38□□□□□ -0.43
HDAC4-210ENST00000493582 ITGA2BP08514 1039 aa12.38□□□□□ -0.43
HDAC4-210ENST00000493582 SPATA31C1P0DKV0 1188 aa12.38□□□□□ -0.43
HDAC4-210ENST00000493582 ARFIP2P53365 341 aa12.38□□□□□ -0.43
HDAC4-210ENST00000493582 CAV1Q03135 178 aa12.38□□□□□ -0.43
HDAC4-210ENST00000493582 CLEC10AQ8IUN9 316 aa12.38□□□□□ -0.43
HDAC4-210ENST00000493582 ST13P4Q8IZP2 240 aaPredicted RBP12.38□□□□□ -0.43
HDAC4-210ENST00000493582 KLF6Q99612 283 aaPredicted RBP12.38□□□□□ -0.43
HDAC4-210ENST00000493582 DCLK3Q9C098 648 aa12.38□□□□□ -0.43
HDAC4-210ENST00000493582 VPS37BQ9H9H4 285 aa12.38□□□□□ -0.43
HDAC4-210ENST00000493582 ANGPTL2Q9UKU9 493 aa12.38□□□□□ -0.43
HDAC4-210ENST00000493582 ZNF142P52746 1687 aaPredicted RBP12.38□□□□□ -0.43
HDAC4-210ENST00000493582 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.38□□□□□ -0.43
HDAC4-210ENST00000493582 B2RBV5 119 aa12.38□□□□□ -0.43
HDAC4-210ENST00000493582 TBCAO75347 108 aaKnown RBP12.38□□□□□ -0.43
HDAC4-210ENST00000493582 RARBP10826 455 aa12.38□□□□□ -0.43
HDAC4-210ENST00000493582 P3H1Q32P28 736 aa12.38□□□□□ -0.43
HDAC4-210ENST00000493582 MDH1BQ5I0G3 518 aa12.38□□□□□ -0.43
HDAC4-210ENST00000493582 STKLD1Q8NE28 680 aa12.38□□□□□ -0.43
HDAC4-210ENST00000493582 ZNF653Q96CK0 615 aa12.38□□□□□ -0.43
HDAC4-210ENST00000493582 CFAP57Q96MR6 1250 aa12.38□□□□□ -0.43
HDAC4-210ENST00000493582 PPM1HQ9ULR3 514 aa12.38□□□□□ -0.43
HDAC4-210ENST00000493582 MYO3BQ8WXR4 1341 aa12.37□□□□□ -0.43
HDAC4-210ENST00000493582 H3BRJ5 948 aa12.37□□□□□ -0.43
HDAC4-210ENST00000493582 PABPC4LP0CB38 370 aaKnown RBP12.37□□□□□ -0.43
HDAC4-210ENST00000493582 DESP17661 470 aa12.37□□□□□ -0.43
HDAC4-210ENST00000493582 SLC16A2P36021 539 aa12.37□□□□□ -0.43
HDAC4-210ENST00000493582 SEPT7Q16181 437 aaKnown RBP12.37□□□□□ -0.43
HDAC4-210ENST00000493582 GRIK5Q16478 980 aa12.37□□□□□ -0.43
HDAC4-210ENST00000493582 EAPPQ56P03 285 aaPredicted RBP12.37□□□□□ -0.43
HDAC4-210ENST00000493582 CCDC62Q6P9F0 684 aa12.37□□□□□ -0.43
HDAC4-210ENST00000493582 RIPOR1Q6ZS17 1223 aa12.37□□□□□ -0.43
HDAC4-210ENST00000493582 TMEM120AQ9BXJ8 343 aa12.37□□□□□ -0.43
HDAC4-210ENST00000493582 TRIM55Q9BYV6 548 aa12.37□□□□□ -0.43
HDAC4-210ENST00000493582 KCNK13Q9HB14 408 aa12.37□□□□□ -0.43
HDAC4-210ENST00000493582 NDE1Q9NXR1 346 aa12.37□□□□□ -0.43
HDAC4-210ENST00000493582 ZNF232Q9UNY5 417 aa12.37□□□□□ -0.43
HDAC4-210ENST00000493582 TBC1D30Q9Y2I9 924 aa12.37□□□□□ -0.43
HDAC4-210ENST00000493582 A8MXQ7 604 aa12.37□□□□□ -0.43
HDAC4-210ENST00000493582 BCRP11274 1271 aa12.37□□□□□ -0.43
HDAC4-210ENST00000493582 SMARCA1P28370 1054 aa12.37□□□□□ -0.43
HDAC4-210ENST00000493582 CLK2P49760 499 aaKnown RBP12.37□□□□□ -0.43
HDAC4-210ENST00000493582 DLG4P78352 724 aa12.37□□□□□ -0.43
HDAC4-210ENST00000493582 MAP7Q14244 749 aa12.37□□□□□ -0.43
HDAC4-210ENST00000493582 BMT2Q1RMZ1 405 aa12.37□□□□□ -0.43
HDAC4-210ENST00000493582 TTBK2Q6IQ55 1244 aa12.37□□□□□ -0.43
HDAC4-210ENST00000493582 ISLR2Q6UXK2 745 aa12.37□□□□□ -0.43
HDAC4-210ENST00000493582 RAPH1Q70E73 1250 aa12.37□□□□□ -0.43
HDAC4-210ENST00000493582 NOP9Q86U38 636 aaKnown RBP12.37□□□□□ -0.43
HDAC4-210ENST00000493582 NEDD1Q8NHV4 660 aa12.37□□□□□ -0.43
HDAC4-210ENST00000493582 LMO3Q8TAP4 145 aa12.37□□□□□ -0.43
HDAC4-210ENST00000493582 ABTB1Q969K4 478 aaPredicted RBP12.37□□□□□ -0.43
HDAC4-210ENST00000493582 LENG1Q96BZ8 264 aaPredicted RBP12.37□□□□□ -0.43
HDAC4-210ENST00000493582 OLFM3Q96PB7 478 aa12.37□□□□□ -0.43
HDAC4-210ENST00000493582 PANX3Q96QZ0 392 aa12.37□□□□□ -0.43
HDAC4-210ENST00000493582 MIS12Q9H081 205 aa12.37□□□□□ -0.43
HDAC4-210ENST00000493582 PSTPIP2Q9H939 334 aa12.37□□□□□ -0.43
HDAC4-210ENST00000493582 LAMB1P07942 1786 aa12.37□□□□□ -0.43
HDAC4-210ENST00000493582 TAF1P21675 1872 aa12.36□□□□□ -0.43
HDAC4-210ENST00000493582 CRABP2P29373 138 aa12.36□□□□□ -0.43
HDAC4-210ENST00000493582 GSTA5Q7RTV2 222 aa12.36□□□□□ -0.43
HDAC4-210ENST00000493582 ZNF276Q8N554 614 aa12.36□□□□□ -0.43
HDAC4-210ENST00000493582 MYCT1Q8N699 235 aa12.36□□□□□ -0.43
HDAC4-210ENST00000493582 GLIS1Q8NBF1 620 aa12.36□□□□□ -0.43
HDAC4-210ENST00000493582 ZNF398Q8TD17 642 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms