RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 EPM2AIP1Q7L775 607 aaPredicted RBP6.77□□□□□ -1.33
CCDC39-206ENST00000489868 VRK3Q8IV63 474 aa6.77□□□□□ -1.33
CCDC39-206ENST00000489868 GRAMD1CQ8IYS0 662 aa6.77□□□□□ -1.33
CCDC39-206ENST00000489868 TMEM132CQ8N3T6 1108 aa6.77□□□□□ -1.33
CCDC39-206ENST00000489868 C3orf20Q8ND61 904 aa6.77□□□□□ -1.33
CCDC39-206ENST00000489868 TMIEQ8NEW7 156 aa6.77□□□□□ -1.33
CCDC39-206ENST00000489868 NEU4Q8WWR8 484 aaPredicted RBP6.77□□□□□ -1.33
CCDC39-206ENST00000489868 JDP2Q8WYK2 163 aa6.77□□□□□ -1.33
CCDC39-206ENST00000489868 NACC2Q96BF6 587 aa6.77□□□□□ -1.33
CCDC39-206ENST00000489868 LRGUKQ96M69 825 aa6.77□□□□□ -1.33
CCDC39-206ENST00000489868 KLHL32Q96NJ5 620 aa6.77□□□□□ -1.33
CCDC39-206ENST00000489868 C1orf43Q9BWL3 253 aa6.77□□□□□ -1.33
CCDC39-206ENST00000489868 JKAMPQ9P055 326 aa6.77□□□□□ -1.33
CCDC39-206ENST00000489868 PNMA8BQ9ULN7 279 aaPredicted RBP6.77□□□□□ -1.33
CCDC39-206ENST00000489868 G3BP2Q9UN86 482 aaKnown RBP6.77□□□□□ -1.33
CCDC39-206ENST00000489868 AP1G1O43747 822 aa6.76□□□□□ -1.33
CCDC39-206ENST00000489868 SPDEFO95238 335 aa6.76□□□□□ -1.33
CCDC39-206ENST00000489868 ABHD16AO95870 558 aa6.76□□□□□ -1.33
CCDC39-206ENST00000489868 RPLP2P05387 115 aaKnown RBP6.76□□□□□ -1.33
CCDC39-206ENST00000489868 SPATA31D3P0C874 917 aa6.76□□□□□ -1.33
CCDC39-206ENST00000489868 VCAM1P19320 739 aa6.76□□□□□ -1.33
CCDC39-206ENST00000489868 LPOP22079 712 aaPredicted RBP6.76□□□□□ -1.33
CCDC39-206ENST00000489868 BMPR1AP36894 532 aa6.76□□□□□ -1.33
CCDC39-206ENST00000489868 GDF5P43026 501 aa6.76□□□□□ -1.33
CCDC39-206ENST00000489868 SCAPQ12770 1279 aa6.76□□□□□ -1.33
CCDC39-206ENST00000489868 RESTQ13127 1097 aa6.76□□□□□ -1.33
CCDC39-206ENST00000489868 TP53BP2Q13625 1128 aa6.76□□□□□ -1.33
CCDC39-206ENST00000489868 ATP2B3Q16720 1220 aa6.76□□□□□ -1.33
CCDC39-206ENST00000489868 SPATA31D4Q6ZUB0 917 aa6.76□□□□□ -1.33
CCDC39-206ENST00000489868 ZNF365Q70YC5 407 aa6.76□□□□□ -1.33
CCDC39-206ENST00000489868 HEATR3Q7Z4Q2 680 aa6.76□□□□□ -1.33
CCDC39-206ENST00000489868 FAM90A1Q86YD7 464 aa6.76□□□□□ -1.33
CCDC39-206ENST00000489868 NLGN4YQ8NFZ3 816 aaPredicted RBP6.76□□□□□ -1.33
CCDC39-206ENST00000489868 NUP133Q8WUM0 1156 aa6.76□□□□□ -1.33
CCDC39-206ENST00000489868 PACSIN1Q9BY11 444 aa6.76□□□□□ -1.33
CCDC39-206ENST00000489868 RNPEPQ9H4A4 650 aa6.76□□□□□ -1.33
CCDC39-206ENST00000489868 ABCF2Q9UG63 623 aa6.76□□□□□ -1.33
CCDC39-206ENST00000489868 NOB1Q9ULX3 412 aaKnown RBP6.76□□□□□ -1.33
CCDC39-206ENST00000489868 OFD1O75665 1012 aa6.75□□□□□ -1.33
CCDC39-206ENST00000489868 ADH4P08319 380 aa6.75□□□□□ -1.33
CCDC39-206ENST00000489868 DDX6P26196 483 aaKnown RBP eCLIP6.75□□□□□ -1.33
CCDC39-206ENST00000489868 PRDX5P30044 214 aa6.75□□□□□ -1.33
CCDC39-206ENST00000489868 CCDC93Q567U6 631 aa6.75□□□□□ -1.33
CCDC39-206ENST00000489868 KCNV1Q6PIU1 500 aa6.75□□□□□ -1.33
CCDC39-206ENST00000489868 SYNE4Q8N205 404 aa6.75□□□□□ -1.33
CCDC39-206ENST00000489868 Q8NA96 180 aa6.75□□□□□ -1.33
CCDC39-206ENST00000489868 DIS3LQ8TF46 1054 aaKnown RBP6.75□□□□□ -1.33
CCDC39-206ENST00000489868 AIFM3Q96NN9 605 aa6.75□□□□□ -1.33
CCDC39-206ENST00000489868 MAP3K14Q99558 947 aa6.75□□□□□ -1.33
CCDC39-206ENST00000489868 REXO4Q9GZR2 422 aaKnown RBP6.75□□□□□ -1.33
CCDC39-206ENST00000489868 POLHQ9Y253 713 aa6.75□□□□□ -1.33
CCDC39-206ENST00000489868 E9PLN8 166 aa6.74□□□□□ -1.33
CCDC39-206ENST00000489868 CYR61O00622 381 aa6.74□□□□□ -1.33
CCDC39-206ENST00000489868 SLC16A6O15403 523 aa6.74□□□□□ -1.33
CCDC39-206ENST00000489868 GPANK1O95872 356 aa6.74□□□□□ -1.33
CCDC39-206ENST00000489868 CYP2C19P33261 490 aa6.74□□□□□ -1.33
CCDC39-206ENST00000489868 PHKA1P46020 1223 aa6.74□□□□□ -1.33
CCDC39-206ENST00000489868 CXADRP78310 365 aa6.74□□□□□ -1.33
CCDC39-206ENST00000489868 PPP1R3BQ86XI6 285 aa6.74□□□□□ -1.33
CCDC39-206ENST00000489868 LDLRAD3Q86YD5 345 aa6.74□□□□□ -1.33
CCDC39-206ENST00000489868 ARHGEF19Q8IW93 802 aa6.74□□□□□ -1.33
CCDC39-206ENST00000489868 PLBD2Q8NHP8 589 aa6.74□□□□□ -1.33
CCDC39-206ENST00000489868 ASB10Q8WXI3 467 aa6.74□□□□□ -1.33
CCDC39-206ENST00000489868 LRIG1Q96JA1 1093 aa6.74□□□□□ -1.33
CCDC39-206ENST00000489868 TAAR9Q96RI9 348 aa6.74□□□□□ -1.33
CCDC39-206ENST00000489868 VKORC1Q9BQB6 163 aa6.74□□□□□ -1.33
CCDC39-206ENST00000489868 SERHL2Q9H4I8 314 aa6.74□□□□□ -1.33
CCDC39-206ENST00000489868 MRPS18AQ9NVS2 196 aaKnown RBP6.74□□□□□ -1.33
CCDC39-206ENST00000489868 KLHL42Q9P2K6 505 aa6.74□□□□□ -1.33
CCDC39-206ENST00000489868 NR2E3Q9Y5X4 410 aa6.74□□□□□ -1.33
CCDC39-206ENST00000489868 GRID2IPA4D2P6 1211 aa6.73□□□□□ -1.33
CCDC39-206ENST00000489868 MATN4O95460 622 aa6.73□□□□□ -1.33
CCDC39-206ENST00000489868 MYBP10242 640 aa6.73□□□□□ -1.33
CCDC39-206ENST00000489868 TYRP14679 529 aa6.73□□□□□ -1.33
CCDC39-206ENST00000489868 NKX6-1P78426 367 aaPredicted RBP6.73□□□□□ -1.33
CCDC39-206ENST00000489868 FHL2Q14192 279 aa6.73□□□□□ -1.33
CCDC39-206ENST00000489868 CYP2A13Q16696 494 aa6.73□□□□□ -1.33
CCDC39-206ENST00000489868 LY6G5CQ5SRR4 150 aa6.73□□□□□ -1.33
CCDC39-206ENST00000489868 THEMIS2Q5TEJ8 643 aa6.73□□□□□ -1.33
CCDC39-206ENST00000489868 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.73□□□□□ -1.33
CCDC39-206ENST00000489868 ULK2Q8IYT8 1036 aa6.73□□□□□ -1.33
CCDC39-206ENST00000489868 SH2D3CQ8N5H7 860 aa6.73□□□□□ -1.33
CCDC39-206ENST00000489868 CELF5Q8N6W0 485 aaKnown RBP6.73□□□□□ -1.33
CCDC39-206ENST00000489868 PPP1R35Q8TAP8 253 aa6.73□□□□□ -1.33
CCDC39-206ENST00000489868 SLC35G2Q8TBE7 412 aa6.73□□□□□ -1.33
CCDC39-206ENST00000489868 PNKPQ96T60 521 aa6.73□□□□□ -1.33
CCDC39-206ENST00000489868 CGRRF1Q99675 332 aa6.73□□□□□ -1.33
CCDC39-206ENST00000489868 LRFN3Q9BTN0 628 aa6.73□□□□□ -1.33
CCDC39-206ENST00000489868 ALOXE3Q9BYJ1 711 aa6.73□□□□□ -1.33
CCDC39-206ENST00000489868 WDR11Q9BZH6 1224 aa6.73□□□□□ -1.33
CCDC39-206ENST00000489868 MRPL46Q9H2W6 279 aaKnown RBP6.73□□□□□ -1.33
CCDC39-206ENST00000489868 LMBRD1Q9NUN5 540 aa6.73□□□□□ -1.33
CCDC39-206ENST00000489868 KCNE5Q9UJ90 142 aa6.73□□□□□ -1.33
CCDC39-206ENST00000489868 CDYLQ9Y232 598 aa6.73□□□□□ -1.33
CCDC39-206ENST00000489868 CDKL5O76039 1030 aa6.72□□□□□ -1.33
CCDC39-206ENST00000489868 AHSGP02765 367 aa6.72□□□□□ -1.33
CCDC39-206ENST00000489868 SMARCA1P28370 1054 aa6.72□□□□□ -1.33
CCDC39-206ENST00000489868 ZEB1P37275 1124 aaPredicted RBP6.72□□□□□ -1.33
CCDC39-206ENST00000489868 PLS1Q14651 629 aa6.72□□□□□ -1.33
CCDC39-206ENST00000489868 PPP2R5AQ15172 486 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms