RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 NACC2Q96BF6 587 aa6.9□□□□□ -1.3
LTN1-206ENST00000486427 CEP89Q96ST8 783 aa6.9□□□□□ -1.3
LTN1-206ENST00000486427 PRRX2Q99811 253 aa6.9□□□□□ -1.3
LTN1-206ENST00000486427 TTPALQ9BTX7 342 aa6.9□□□□□ -1.3
LTN1-206ENST00000486427 TLR10Q9BXR5 811 aa6.9□□□□□ -1.3
LTN1-206ENST00000486427 ALOXE3Q9BYJ1 711 aa6.9□□□□□ -1.3
LTN1-206ENST00000486427 RHOBTB2Q9BYZ6 727 aa6.9□□□□□ -1.3
LTN1-206ENST00000486427 VSX1Q9NZR4 365 aaPredicted RBP6.9□□□□□ -1.3
LTN1-206ENST00000486427 F2RL2O00254 374 aa6.89□□□□□ -1.31
LTN1-206ENST00000486427 FOXN1O15353 648 aa6.89□□□□□ -1.31
LTN1-206ENST00000486427 CDKL5O76039 1030 aa6.89□□□□□ -1.31
LTN1-206ENST00000486427 RPLP2P05387 115 aaKnown RBP6.89□□□□□ -1.31
LTN1-206ENST00000486427 INHBCP55103 352 aa6.89□□□□□ -1.31
LTN1-206ENST00000486427 TGFB2P61812 414 aa6.89□□□□□ -1.31
LTN1-206ENST00000486427 CXADRP78310 365 aa6.89□□□□□ -1.31
LTN1-206ENST00000486427 MRGPRGQ86SM5 289 aa6.89□□□□□ -1.31
LTN1-206ENST00000486427 RNF31Q96EP0 1072 aa6.89□□□□□ -1.31
LTN1-206ENST00000486427 PACSIN1Q9BY11 444 aa6.89□□□□□ -1.31
LTN1-206ENST00000486427 RTFDC1Q9BY42 306 aaPredicted RBP6.89□□□□□ -1.31
LTN1-206ENST00000486427 JKAMPQ9P055 326 aa6.89□□□□□ -1.31
LTN1-206ENST00000486427 COL4A3Q01955 1670 aa6.89□□□□□ -1.31
LTN1-206ENST00000486427 AKAP10O43572 662 aa6.88□□□□□ -1.31
LTN1-206ENST00000486427 RAB27AP51159 221 aa6.88□□□□□ -1.31
LTN1-206ENST00000486427 FSTL1Q12841 308 aa6.88□□□□□ -1.31
LTN1-206ENST00000486427 PIN1Q13526 163 aaPredicted RBP6.88□□□□□ -1.31
LTN1-206ENST00000486427 SLC4A10Q6U841 1118 aa6.88□□□□□ -1.31
LTN1-206ENST00000486427 ZNF365Q70YC5 407 aa6.88□□□□□ -1.31
LTN1-206ENST00000486427 RAVER1Q8IY67 606 aaKnown RBP6.88□□□□□ -1.31
LTN1-206ENST00000486427 BEND2Q8NDZ0 799 aa6.88□□□□□ -1.31
LTN1-206ENST00000486427 KLHL32Q96NJ5 620 aa6.88□□□□□ -1.31
LTN1-206ENST00000486427 PNKPQ96T60 521 aa6.88□□□□□ -1.31
LTN1-206ENST00000486427 KCNE5Q9UJ90 142 aa6.88□□□□□ -1.31
LTN1-206ENST00000486427 ANKRD6Q9Y2G4 727 aa6.88□□□□□ -1.31
LTN1-206ENST00000486427 THRAP3Q9Y2W1 955 aaKnown RBP6.88□□□□□ -1.31
LTN1-206ENST00000486427 PCDHA3Q9Y5H8 950 aa6.88□□□□□ -1.31
LTN1-206ENST00000486427 TMEM191CA6NGB0 347 aa6.87□□□□□ -1.31
LTN1-206ENST00000486427 AKAP5P24588 427 aa6.87□□□□□ -1.31
LTN1-206ENST00000486427 MAP2K6P52564 334 aa6.87□□□□□ -1.31
LTN1-206ENST00000486427 NOGQ13253 232 aa6.87□□□□□ -1.31
LTN1-206ENST00000486427 CYP2A13Q16696 494 aa6.87□□□□□ -1.31
LTN1-206ENST00000486427 Q6YL49 198 aa6.87□□□□□ -1.31
LTN1-206ENST00000486427 GPR149Q86SP6 731 aa6.87□□□□□ -1.31
LTN1-206ENST00000486427 Q8NA96 180 aa6.87□□□□□ -1.31
LTN1-206ENST00000486427 C3orf20Q8ND61 904 aa6.87□□□□□ -1.31
LTN1-206ENST00000486427 TMIEQ8NEW7 156 aa6.87□□□□□ -1.31
LTN1-206ENST00000486427 RGMAQ96B86 450 aa6.87□□□□□ -1.31
LTN1-206ENST00000486427 NUP88Q99567 741 aaPredicted RBP6.87□□□□□ -1.31
LTN1-206ENST00000486427 NOX1Q9Y5S8 564 aa6.87□□□□□ -1.31
LTN1-206ENST00000486427 A0A087X1B8 175 aa6.86□□□□□ -1.31
LTN1-206ENST00000486427 PIPSLA2A3N6 862 aa6.86□□□□□ -1.31
LTN1-206ENST00000486427 B3GALT2O43825 422 aa6.86□□□□□ -1.31
LTN1-206ENST00000486427 RAMP2O60895 175 aa6.86□□□□□ -1.31
LTN1-206ENST00000486427 DTNBO60941 627 aa6.86□□□□□ -1.31
LTN1-206ENST00000486427 FOSP01100 380 aaPredicted RBP6.86□□□□□ -1.31
LTN1-206ENST00000486427 EGR2P11161 476 aaPredicted RBP6.86□□□□□ -1.31
LTN1-206ENST00000486427 PROZP22891 400 aa6.86□□□□□ -1.31
LTN1-206ENST00000486427 HK3P52790 923 aa6.86□□□□□ -1.31
LTN1-206ENST00000486427 MXRA7P84157 204 aa6.86□□□□□ -1.31
LTN1-206ENST00000486427 PGS1Q32NB8 556 aa6.86□□□□□ -1.31
LTN1-206ENST00000486427 PLEKHG6Q3KR16 790 aa6.86□□□□□ -1.31
LTN1-206ENST00000486427 SPDYE7PQ495Y7 208 aa6.86□□□□□ -1.31
LTN1-206ENST00000486427 ARMC6Q6NXE6 501 aa6.86□□□□□ -1.31
LTN1-206ENST00000486427 FOXR2Q6PJQ5 311 aa6.86□□□□□ -1.31
LTN1-206ENST00000486427 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.86□□□□□ -1.31
LTN1-206ENST00000486427 MVB12AQ96EY5 273 aa6.86□□□□□ -1.31
LTN1-206ENST00000486427 BOD1Q96IK1 185 aa6.86□□□□□ -1.31
LTN1-206ENST00000486427 AGAP2Q99490 1192 aa6.86□□□□□ -1.31
LTN1-206ENST00000486427 C1orf43Q9BWL3 253 aa6.86□□□□□ -1.31
LTN1-206ENST00000486427 MAN1C1Q9NR34 630 aa6.86□□□□□ -1.31
LTN1-206ENST00000486427 TMEM74BQ9NUR3 256 aa6.86□□□□□ -1.31
LTN1-206ENST00000486427 SYBUQ9NX95 663 aa6.86□□□□□ -1.31
LTN1-206ENST00000486427 RNF181Q9P0P0 153 aa6.86□□□□□ -1.31
LTN1-206ENST00000486427 CDYLQ9Y232 598 aa6.86□□□□□ -1.31
LTN1-206ENST00000486427 MTO1Q9Y2Z2 717 aaKnown RBP6.86□□□□□ -1.31
LTN1-206ENST00000486427 DMRT1Q9Y5R6 373 aa6.86□□□□□ -1.31
LTN1-206ENST00000486427 WDR33Q9C0J8 1336 aaKnown RBP6.85□□□□□ -1.31
LTN1-206ENST00000486427 PRSS29PA6NIE9 313 aa6.85□□□□□ -1.31
LTN1-206ENST00000486427 ERN1O75460 977 aaKnown RBP6.85□□□□□ -1.31
LTN1-206ENST00000486427 FTLP02792 175 aaPredicted RBP6.85□□□□□ -1.31
LTN1-206ENST00000486427 ITGAMP11215 1152 aa6.85□□□□□ -1.31
LTN1-206ENST00000486427 GEN1Q17RS7 908 aa6.85□□□□□ -1.31
LTN1-206ENST00000486427 CCDC93Q567U6 631 aa6.85□□□□□ -1.31
LTN1-206ENST00000486427 HEATR3Q7Z4Q2 680 aa6.85□□□□□ -1.31
LTN1-206ENST00000486427 FAM43AQ8N2R8 423 aa6.85□□□□□ -1.31
LTN1-206ENST00000486427 JPH3Q8WXH2 748 aaPredicted RBP6.85□□□□□ -1.31
LTN1-206ENST00000486427 HPS3Q969F9 1004 aa6.85□□□□□ -1.31
LTN1-206ENST00000486427 FUBP1Q96AE4 644 aaKnown RBP6.85□□□□□ -1.31
LTN1-206ENST00000486427 SLC12A5Q9H2X9 1139 aa6.85□□□□□ -1.31
LTN1-206ENST00000486427 GALNT9Q9HCQ5 603 aa6.85□□□□□ -1.31
LTN1-206ENST00000486427 ABCF2Q9UG63 623 aa6.85□□□□□ -1.31
LTN1-206ENST00000486427 ZNF180Q9UJW8 692 aa6.85□□□□□ -1.31
LTN1-206ENST00000486427 POLHQ9Y253 713 aa6.85□□□□□ -1.31
LTN1-206ENST00000486427 E9PLN8 166 aa6.84□□□□□ -1.31
LTN1-206ENST00000486427 SLC16A6O15403 523 aa6.84□□□□□ -1.31
LTN1-206ENST00000486427 GCP02774 474 aa6.84□□□□□ -1.31
LTN1-206ENST00000486427 CT47B1P0C2W7 299 aaPredicted RBP6.84□□□□□ -1.31
LTN1-206ENST00000486427 VCAM1P19320 739 aa6.84□□□□□ -1.31
LTN1-206ENST00000486427 SMARCA1P28370 1054 aa6.84□□□□□ -1.31
LTN1-206ENST00000486427 PRDX5P30044 214 aa6.84□□□□□ -1.31
LTN1-206ENST00000486427 COL10A1Q03692 680 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms