RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 HVCN1Q96D96 273 aa10.92□□□□□ -0.66
CPSF4-213ENST00000484112 KBTBD4Q9NVX7 518 aa10.92□□□□□ -0.66
CPSF4-213ENST00000484112 HCFC1R1Q9NWW0 138 aa10.92□□□□□ -0.66
CPSF4-213ENST00000484112 SNTG2Q9NY99 539 aa10.92□□□□□ -0.66
CPSF4-213ENST00000484112 DLL3Q9NYJ7 618 aa10.92□□□□□ -0.66
CPSF4-213ENST00000484112 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.92□□□□□ -0.66
CPSF4-213ENST00000484112 DOCK8Q8NF50 2099 aa10.92□□□□□ -0.66
CPSF4-213ENST00000484112 COL4A3Q01955 1670 aa10.92□□□□□ -0.66
CPSF4-213ENST00000484112 TDRD15B5MCY1 1934 aaKnown RBP10.92□□□□□ -0.66
CPSF4-213ENST00000484112 A0A1W2PQ27 194 aa10.91□□□□□ -0.66
CPSF4-213ENST00000484112 A0A1W2PQ64 194 aa10.91□□□□□ -0.66
CPSF4-213ENST00000484112 A0A1W2PQD8 194 aa10.91□□□□□ -0.66
CPSF4-213ENST00000484112 FRMD3A2A2Y4 597 aa10.91□□□□□ -0.66
CPSF4-213ENST00000484112 TOM1L1O75674 476 aa10.91□□□□□ -0.66
CPSF4-213ENST00000484112 MYL1P05976 194 aa10.91□□□□□ -0.66
CPSF4-213ENST00000484112 THP07101 528 aa10.91□□□□□ -0.66
CPSF4-213ENST00000484112 OR1D2P34982 312 aa10.91□□□□□ -0.66
CPSF4-213ENST00000484112 PFKPQ01813 784 aa10.91□□□□□ -0.66
CPSF4-213ENST00000484112 ALCAMQ13740 583 aa10.91□□□□□ -0.66
CPSF4-213ENST00000484112 E2F4Q16254 413 aa10.91□□□□□ -0.66
CPSF4-213ENST00000484112 KYAT1Q16773 422 aa10.91□□□□□ -0.66
CPSF4-213ENST00000484112 ZBTB41Q5SVQ8 909 aa10.91□□□□□ -0.66
CPSF4-213ENST00000484112 ATF7IP2Q5U623 682 aa10.91□□□□□ -0.66
CPSF4-213ENST00000484112 TSSK4Q6SA08 328 aa10.91□□□□□ -0.66
CPSF4-213ENST00000484112 TPRG1Q6ZUI0 275 aa10.91□□□□□ -0.66
CPSF4-213ENST00000484112 MYCT1Q8N699 235 aa10.91□□□□□ -0.66
CPSF4-213ENST00000484112 LRRC15Q8TF66 581 aa10.91□□□□□ -0.66
CPSF4-213ENST00000484112 LEO1Q8WVC0 666 aaPredicted RBP10.91□□□□□ -0.66
CPSF4-213ENST00000484112 PIK3R5Q8WYR1 880 aa10.91□□□□□ -0.66
CPSF4-213ENST00000484112 DDX12PQ92771 950 aa10.91□□□□□ -0.66
CPSF4-213ENST00000484112 SECISBP2LQ93073 1101 aaKnown RBP10.91□□□□□ -0.66
CPSF4-213ENST00000484112 MCRS1Q96EZ8 462 aa10.91□□□□□ -0.66
CPSF4-213ENST00000484112 ACO2Q99798 780 aaKnown RBP10.91□□□□□ -0.66
CPSF4-213ENST00000484112 CXCL16Q9H2A7 254 aa10.91□□□□□ -0.66
CPSF4-213ENST00000484112 PDZD7Q9H5P4 517 aa10.91□□□□□ -0.66
CPSF4-213ENST00000484112 PTPRHQ9HD43 1115 aa10.91□□□□□ -0.66
CPSF4-213ENST00000484112 LTB4R2Q9NPC1 389 aa10.91□□□□□ -0.66
CPSF4-213ENST00000484112 OLFML3Q9NRN5 406 aa10.91□□□□□ -0.66
CPSF4-213ENST00000484112 DNMT3BQ9UBC3 853 aaKnown RBP10.91□□□□□ -0.66
CPSF4-213ENST00000484112 FBXO4Q9UKT5 387 aa10.91□□□□□ -0.66
CPSF4-213ENST00000484112 USP20Q9Y2K6 914 aa10.91□□□□□ -0.66
CPSF4-213ENST00000484112 MTCL1Q9Y4B5 1905 aaKnown RBP10.91□□□□□ -0.66
CPSF4-213ENST00000484112 GVINP1Q7Z2Y8 2422 aa10.9□□□□□ -0.66
CPSF4-213ENST00000484112 FAM237AA0A1B0GTK4 181 aa10.9□□□□□ -0.66
CPSF4-213ENST00000484112 SFI1A8K8P3 1242 aa10.9□□□□□ -0.66
CPSF4-213ENST00000484112 PTGESO14684 152 aa10.9□□□□□ -0.66
CPSF4-213ENST00000484112 SPTLC1O15269 473 aa10.9□□□□□ -0.66
CPSF4-213ENST00000484112 SLC16A4O15374 487 aa10.9□□□□□ -0.66
CPSF4-213ENST00000484112 PIGRP01833 764 aa10.9□□□□□ -0.66
CPSF4-213ENST00000484112 MCF2P10911 925 aa10.9□□□□□ -0.66
CPSF4-213ENST00000484112 PROZP22891 400 aa10.9□□□□□ -0.66
CPSF4-213ENST00000484112 GTF2BQ00403 316 aa10.9□□□□□ -0.66
CPSF4-213ENST00000484112 RAD51AP2Q09MP3 1159 aa10.9□□□□□ -0.66
CPSF4-213ENST00000484112 ELAVL2Q12926 359 aaKnown RBP10.9□□□□□ -0.66
CPSF4-213ENST00000484112 DHX8Q14562 1220 aaKnown RBP10.9□□□□□ -0.66
CPSF4-213ENST00000484112 ZNF528Q3MIS6 628 aa10.9□□□□□ -0.66
CPSF4-213ENST00000484112 FOXD4L6Q3SYB3 417 aaPredicted RBP10.9□□□□□ -0.66
CPSF4-213ENST00000484112 PABPC1LQ4VXU2 614 aaKnown RBP10.9□□□□□ -0.66
CPSF4-213ENST00000484112 NT5DC1Q5TFE4 455 aa10.9□□□□□ -0.66
CPSF4-213ENST00000484112 FOXD4L3Q6VB84 417 aaPredicted RBP10.9□□□□□ -0.66
CPSF4-213ENST00000484112 HAUS6Q7Z4H7 955 aa10.9□□□□□ -0.66
CPSF4-213ENST00000484112 DNAJC19Q96DA6 116 aa10.9□□□□□ -0.66
CPSF4-213ENST00000484112 CCDC34Q96HJ3 373 aa10.9□□□□□ -0.66
CPSF4-213ENST00000484112 CNTNAP3BQ96NU0 1288 aa10.9□□□□□ -0.66
CPSF4-213ENST00000484112 DDX23Q9BUQ8 820 aaKnown RBP10.9□□□□□ -0.66
CPSF4-213ENST00000484112 KIFC3Q9BVG8 833 aa10.9□□□□□ -0.66
CPSF4-213ENST00000484112 CNTNAP3Q9BZ76 1288 aa10.9□□□□□ -0.66
CPSF4-213ENST00000484112 KCNH3Q9ULD8 1083 aa10.9□□□□□ -0.66
CPSF4-213ENST00000484112 GDAQ9Y2T3 454 aa10.9□□□□□ -0.66
CPSF4-213ENST00000484112 MRPS23Q9Y3D9 190 aaKnown RBP10.9□□□□□ -0.66
CPSF4-213ENST00000484112 EP300Q09472 2414 aaPredicted RBP10.9□□□□□ -0.66
CPSF4-213ENST00000484112 MYH11P35749 1972 aa10.89□□□□□ -0.67
CPSF4-213ENST00000484112 A0A087X0B3 334 aa10.89□□□□□ -0.67
CPSF4-213ENST00000484112 NPHP3-ACAD11A0A0J9YXS1 232 aa10.89□□□□□ -0.67
CPSF4-213ENST00000484112 MYMKA6NI61 221 aa10.89□□□□□ -0.67
CPSF4-213ENST00000484112 TTLL13PA6NNM8 815 aa10.89□□□□□ -0.67
CPSF4-213ENST00000484112 K7ENM7 598 aa10.89□□□□□ -0.67
CPSF4-213ENST00000484112 NCAM2O15394 837 aa10.89□□□□□ -0.67
CPSF4-213ENST00000484112 POLR2DO15514 142 aaKnown RBP10.89□□□□□ -0.67
CPSF4-213ENST00000484112 RECQL4O94761 1208 aa10.89□□□□□ -0.67
CPSF4-213ENST00000484112 B3GAT3O94766 335 aa10.89□□□□□ -0.67
CPSF4-213ENST00000484112 SLFN14P0C7P3 912 aa10.89□□□□□ -0.67
CPSF4-213ENST00000484112 IGFBP6P24592 240 aaPredicted RBP10.89□□□□□ -0.67
CPSF4-213ENST00000484112 TARSP26639 723 aaKnown RBP10.89□□□□□ -0.67
CPSF4-213ENST00000484112 HOXA9P31269 272 aa10.89□□□□□ -0.67
CPSF4-213ENST00000484112 GRM5P41594 1212 aa10.89□□□□□ -0.67
CPSF4-213ENST00000484112 ATXN1P54253 815 aaKnown RBP10.89□□□□□ -0.67
CPSF4-213ENST00000484112 POU5F1Q01860 360 aaKnown RBP10.89□□□□□ -0.67
CPSF4-213ENST00000484112 RAB33AQ14088 237 aa10.89□□□□□ -0.67
CPSF4-213ENST00000484112 UVSSAQ2YD98 709 aa10.89□□□□□ -0.67
CPSF4-213ENST00000484112 GLRA4Q5JXX5 417 aa10.89□□□□□ -0.67
CPSF4-213ENST00000484112 PDXDC1Q6P996 788 aa10.89□□□□□ -0.67
CPSF4-213ENST00000484112 MPZL3Q6UWV2 235 aa10.89□□□□□ -0.67
CPSF4-213ENST00000484112 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.89□□□□□ -0.67
CPSF4-213ENST00000484112 STXBP4Q6ZWJ1 553 aa10.89□□□□□ -0.67
CPSF4-213ENST00000484112 TAS1R3Q7RTX0 852 aa10.89□□□□□ -0.67
CPSF4-213ENST00000484112 ZNF720Q7Z2F6 126 aa10.89□□□□□ -0.67
CPSF4-213ENST00000484112 NPAS3Q8IXF0 933 aa10.89□□□□□ -0.67
CPSF4-213ENST00000484112 CCDC65Q8IXS2 484 aa10.89□□□□□ -0.67
CPSF4-213ENST00000484112 CEP57L1Q8IYX8 460 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms