RNA–Protein interactions for RNA: ENST00000482965.1

SNX4-205, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-205ENST00000482965 GPR65Q8IYL9 337 aa9.5□□□□□ -0.89
SNX4-205ENST00000482965 TMEM130Q8N3G9 435 aa9.5□□□□□ -0.89
SNX4-205ENST00000482965 GUF1Q8N442 669 aaKnown RBP9.5□□□□□ -0.89
SNX4-205ENST00000482965 RDH13Q8NBN7 331 aa9.5□□□□□ -0.89
SNX4-205ENST00000482965 CACTINQ8WUQ7 758 aaKnown RBP9.5□□□□□ -0.89
SNX4-205ENST00000482965 MS4A3Q96HJ5 214 aa9.5□□□□□ -0.89
SNX4-205ENST00000482965 KLHL5Q96PQ7 755 aa9.5□□□□□ -0.89
SNX4-205ENST00000482965 GTPBP4Q9BZE4 634 aaKnown RBP9.5□□□□□ -0.89
SNX4-205ENST00000482965 KCTD10Q9H3F6 313 aa9.5□□□□□ -0.89
SNX4-205ENST00000482965 PDE11AQ9HCR9 933 aa9.5□□□□□ -0.89
SNX4-205ENST00000482965 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.5□□□□□ -0.89
SNX4-205ENST00000482965 CHST7Q9NS84 486 aa9.5□□□□□ -0.89
SNX4-205ENST00000482965 DPP3Q9NY33 737 aa9.5□□□□□ -0.89
SNX4-205ENST00000482965 BARX2Q9UMQ3 279 aaPredicted RBP9.5□□□□□ -0.89
SNX4-205ENST00000482965 MAPK8IP1Q9UQF2 711 aa9.5□□□□□ -0.89
SNX4-205ENST00000482965 PDXKO00764 312 aa9.49□□□□□ -0.89
SNX4-205ENST00000482965 PPEF2O14830 753 aa9.49□□□□□ -0.89
SNX4-205ENST00000482965 TEX28O15482 410 aa9.49□□□□□ -0.89
SNX4-205ENST00000482965 GABBR2O75899 941 aa9.49□□□□□ -0.89
SNX4-205ENST00000482965 GLP2RO95838 553 aa9.49□□□□□ -0.89
SNX4-205ENST00000482965 NR3C1P04150 777 aa9.49□□□□□ -0.89
SNX4-205ENST00000482965 ADH1AP07327 375 aa9.49□□□□□ -0.89
SNX4-205ENST00000482965 TMEM191BP0C7N4 346 aa9.49□□□□□ -0.89
SNX4-205ENST00000482965 FGFR3P22607 806 aa9.49□□□□□ -0.89
SNX4-205ENST00000482965 TKTP29401 623 aaKnown RBP9.49□□□□□ -0.89
SNX4-205ENST00000482965 LTBRP36941 435 aa9.49□□□□□ -0.89
SNX4-205ENST00000482965 WNT7BP56706 349 aa9.49□□□□□ -0.89
SNX4-205ENST00000482965 RBM10P98175 930 aaKnown RBP9.49□□□□□ -0.89
SNX4-205ENST00000482965 DLX2Q07687 328 aaPredicted RBP9.49□□□□□ -0.89
SNX4-205ENST00000482965 CYP24A1Q07973 514 aa9.49□□□□□ -0.89
SNX4-205ENST00000482965 CLUL1Q15846 466 aa9.49□□□□□ -0.89
SNX4-205ENST00000482965 PSMD5Q16401 504 aa9.49□□□□□ -0.89
SNX4-205ENST00000482965 SNRNP35Q16560 246 aaKnown RBP9.49□□□□□ -0.89
SNX4-205ENST00000482965 LEXMQ3ZCV2 418 aa9.49□□□□□ -0.89
SNX4-205ENST00000482965 ZNF658Q5TYW1 1059 aaPredicted RBP9.49□□□□□ -0.89
SNX4-205ENST00000482965 C9orf57Q5W0N0 161 aa9.49□□□□□ -0.89
SNX4-205ENST00000482965 PDXDC1Q6P996 788 aa9.49□□□□□ -0.89
SNX4-205ENST00000482965 PRSS55Q6UWB4 352 aaPredicted RBP9.49□□□□□ -0.89
SNX4-205ENST00000482965 GLYCTKQ8IVS8 523 aa9.49□□□□□ -0.89
SNX4-205ENST00000482965 SMYD4Q8IYR2 804 aaPredicted RBP9.49□□□□□ -0.89
SNX4-205ENST00000482965 VN1R2Q8NFZ6 395 aa9.49□□□□□ -0.89
SNX4-205ENST00000482965 PIK3R5Q8WYR1 880 aa9.49□□□□□ -0.89
SNX4-205ENST00000482965 CASP10Q92851 521 aa9.49□□□□□ -0.89
SNX4-205ENST00000482965 ANKRD36BP1Q96IX9 119 aa9.49□□□□□ -0.89
SNX4-205ENST00000482965 SUSD3Q96L08 255 aa9.49□□□□□ -0.89
SNX4-205ENST00000482965 FBXL18Q96ME1 805 aa9.49□□□□□ -0.89
SNX4-205ENST00000482965 ASB2Q96Q27 587 aa9.49□□□□□ -0.89
SNX4-205ENST00000482965 FNBP1Q96RU3 617 aa9.49□□□□□ -0.89
SNX4-205ENST00000482965 RXFP1Q9HBX9 757 aa9.49□□□□□ -0.89
SNX4-205ENST00000482965 FNIP2Q9P278 1114 aa9.49□□□□□ -0.89
SNX4-205ENST00000482965 CD207Q9UJ71 328 aa9.49□□□□□ -0.89
SNX4-205ENST00000482965 HCFC2Q9Y5Z7 792 aa9.49□□□□□ -0.89
SNX4-205ENST00000482965 ANO9A1A5B4 782 aa9.48□□□□□ -0.89
SNX4-205ENST00000482965 GOLGA6L22H0YM25 854 aa9.48□□□□□ -0.89
SNX4-205ENST00000482965 SYN3O14994 580 aa9.48□□□□□ -0.89
SNX4-205ENST00000482965 TNNC2P02585 160 aa9.48□□□□□ -0.89
SNX4-205ENST00000482965 DLATP10515 647 aaKnown RBP9.48□□□□□ -0.89
SNX4-205ENST00000482965 EPCAMP16422 314 aa9.48□□□□□ -0.89
SNX4-205ENST00000482965 RPL17P18621 184 aaKnown RBP9.48□□□□□ -0.89
SNX4-205ENST00000482965 KCNQ1P51787 676 aa9.48□□□□□ -0.89
SNX4-205ENST00000482965 STIM1Q13586 685 aa9.48□□□□□ -0.89
SNX4-205ENST00000482965 KCNC3Q14003 757 aa9.48□□□□□ -0.89
SNX4-205ENST00000482965 MYBPC2Q14324 1141 aa9.48□□□□□ -0.89
SNX4-205ENST00000482965 PSMD6Q15008 389 aa9.48□□□□□ -0.89
SNX4-205ENST00000482965 PUS10Q3MIT2 529 aaKnown RBP9.48□□□□□ -0.89
SNX4-205ENST00000482965 TJAP1Q5JTD0 557 aa9.48□□□□□ -0.89
SNX4-205ENST00000482965 CEP135Q66GS9 1140 aa9.48□□□□□ -0.89
SNX4-205ENST00000482965 LMBRD2Q68DH5 695 aaPredicted RBP9.48□□□□□ -0.89
SNX4-205ENST00000482965 ISM2Q6H9L7 571 aa9.48□□□□□ -0.89
SNX4-205ENST00000482965 PTCRAQ6ISU1 281 aaPredicted RBP9.48□□□□□ -0.89
SNX4-205ENST00000482965 ANKRD54Q6NXT1 300 aa9.48□□□□□ -0.89
SNX4-205ENST00000482965 DSTYKQ6XUX3 929 aa9.48□□□□□ -0.89
SNX4-205ENST00000482965 TMEM184AQ6ZMB5 413 aa9.48□□□□□ -0.89
SNX4-205ENST00000482965 ANKS3Q6ZW76 656 aa9.48□□□□□ -0.89
SNX4-205ENST00000482965 SLC9A9Q8IVB4 645 aa9.48□□□□□ -0.89
SNX4-205ENST00000482965 APPL2Q8NEU8 664 aa9.48□□□□□ -0.89
SNX4-205ENST00000482965 SPATA20Q8TB22 786 aa9.48□□□□□ -0.89
SNX4-205ENST00000482965 LNX1Q8TBB1 728 aaPredicted RBP9.48□□□□□ -0.89
SNX4-205ENST00000482965 SLC22A17Q8WUG5 538 aa9.48□□□□□ -0.89
SNX4-205ENST00000482965 CCDC127Q96BQ5 260 aa9.48□□□□□ -0.89
SNX4-205ENST00000482965 ZNF560Q96MR9 790 aa9.48□□□□□ -0.89
SNX4-205ENST00000482965 MTMR12Q9C0I1 747 aa9.48□□□□□ -0.89
SNX4-205ENST00000482965 INTS13Q9NVM9 706 aa9.48□□□□□ -0.89
SNX4-205ENST00000482965 DZANK1Q9NVP4 752 aa9.48□□□□□ -0.89
SNX4-205ENST00000482965 DMAC2Q9NW81 257 aa9.48□□□□□ -0.89
SNX4-205ENST00000482965 CLEC1BQ9P126 229 aa9.48□□□□□ -0.89
SNX4-205ENST00000482965 MAN1B1Q9UKM7 699 aa9.48□□□□□ -0.89
SNX4-205ENST00000482965 TRAF3IP3Q9Y228 551 aa9.48□□□□□ -0.89
SNX4-205ENST00000482965 FAM50BQ9Y247 325 aa9.48□□□□□ -0.89
SNX4-205ENST00000482965 FRMD4BQ9Y2L6 1034 aa9.48□□□□□ -0.89
SNX4-205ENST00000482965 R3HCC1Q9Y3T6 440 aaKnown RBP9.48□□□□□ -0.89
SNX4-205ENST00000482965 ARHGEF37A1IGU5 675 aa9.47□□□□□ -0.89
SNX4-205ENST00000482965 H7C4K7 107 aa9.47□□□□□ -0.89
SNX4-205ENST00000482965 M0QZQ0 153 aa9.47□□□□□ -0.89
SNX4-205ENST00000482965 BIN1O00499 593 aa9.47□□□□□ -0.89
SNX4-205ENST00000482965 PIRO00625 290 aa9.47□□□□□ -0.89
SNX4-205ENST00000482965 GLUD1P00367 558 aa9.47□□□□□ -0.89
SNX4-205ENST00000482965 ITGB3P05106 788 aa9.47□□□□□ -0.89
SNX4-205ENST00000482965 KRT19P08727 400 aa9.47□□□□□ -0.89
SNX4-205ENST00000482965 ODC1P11926 461 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms