RNA–Protein interactions for RNA: ENST00000480064.1

PBRM1-220, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 919 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-220ENST00000480064 HOXC11O43248 304 aaPredicted RBP7.13□□□□□ -1.27
PBRM1-220ENST00000480064 HPXP02790 462 aa7.13□□□□□ -1.27
PBRM1-220ENST00000480064 MT-ND5P03915 603 aa7.13□□□□□ -1.27
PBRM1-220ENST00000480064 VDRP11473 427 aa7.13□□□□□ -1.27
PBRM1-220ENST00000480064 CKMT1AP12532 417 aa7.13□□□□□ -1.27
PBRM1-220ENST00000480064 CARSP49589 748 aaKnown RBP7.13□□□□□ -1.27
PBRM1-220ENST00000480064 SOX8P57073 446 aa7.13□□□□□ -1.27
PBRM1-220ENST00000480064 TLE1Q04724 770 aa7.13□□□□□ -1.27
PBRM1-220ENST00000480064 TLE2Q04725 743 aa7.13□□□□□ -1.27
PBRM1-220ENST00000480064 SNAPC2Q13487 334 aa7.13□□□□□ -1.27
PBRM1-220ENST00000480064 RAB30Q15771 203 aa7.13□□□□□ -1.27
PBRM1-220ENST00000480064 MAN2A1Q16706 1144 aa7.13□□□□□ -1.27
PBRM1-220ENST00000480064 ATP2B3Q16720 1220 aa7.13□□□□□ -1.27
PBRM1-220ENST00000480064 WDR45BQ5MNZ6 344 aa7.13□□□□□ -1.27
PBRM1-220ENST00000480064 VASNQ6EMK4 673 aa7.13□□□□□ -1.27
PBRM1-220ENST00000480064 SULT6B1Q6IMI4 303 aa7.13□□□□□ -1.27
PBRM1-220ENST00000480064 SPPL2CQ8IUH8 684 aa7.13□□□□□ -1.27
PBRM1-220ENST00000480064 FTSJ3Q8IY81 847 aaKnown RBP7.13□□□□□ -1.27
PBRM1-220ENST00000480064 ZNF480Q8WV37 535 aa7.13□□□□□ -1.27
PBRM1-220ENST00000480064 TOE1Q96GM8 510 aaKnown RBP7.13□□□□□ -1.27
PBRM1-220ENST00000480064 DYDC2Q96IM9 177 aa7.13□□□□□ -1.27
PBRM1-220ENST00000480064 MRGPRX1Q96LB2 322 aa7.13□□□□□ -1.27
PBRM1-220ENST00000480064 BTBD2Q9BX70 525 aa7.13□□□□□ -1.27
PBRM1-220ENST00000480064 AMNQ9BXJ7 453 aa7.13□□□□□ -1.27
PBRM1-220ENST00000480064 STK31Q9BXU1 1019 aa7.13□□□□□ -1.27
PBRM1-220ENST00000480064 EPB41L4BQ9H329 900 aa7.13□□□□□ -1.27
PBRM1-220ENST00000480064 KCNK12Q9HB15 430 aa7.13□□□□□ -1.27
PBRM1-220ENST00000480064 SEPSECSQ9HD40 501 aaKnown RBP7.13□□□□□ -1.27
PBRM1-220ENST00000480064 LANCL2Q9NS86 450 aa7.13□□□□□ -1.27
PBRM1-220ENST00000480064 MYBBP1AQ9BQG0 1328 aaKnown RBP7.12□□□□□ -1.27
PBRM1-220ENST00000480064 CCDC196A0A1B0GTZ2 297 aa7.12□□□□□ -1.27
PBRM1-220ENST00000480064 TRIM43BA6NCK2 446 aa7.12□□□□□ -1.27
PBRM1-220ENST00000480064 CLCA1A8K7I4 914 aa7.12□□□□□ -1.27
PBRM1-220ENST00000480064 ZBED4O75132 1171 aa7.12□□□□□ -1.27
PBRM1-220ENST00000480064 ZBTB7AO95365 584 aa7.12□□□□□ -1.27
PBRM1-220ENST00000480064 ITGA2BP08514 1039 aa7.12□□□□□ -1.27
PBRM1-220ENST00000480064 ENO2P09104 434 aaPredicted RBP7.12□□□□□ -1.27
PBRM1-220ENST00000480064 LTA4HP09960 611 aaKnown RBP7.12□□□□□ -1.27
PBRM1-220ENST00000480064 CTSSP25774 331 aa7.12□□□□□ -1.27
PBRM1-220ENST00000480064 POLE2P56282 527 aa7.12□□□□□ -1.27
PBRM1-220ENST00000480064 HTRA4P83105 476 aaPredicted RBP7.12□□□□□ -1.27
PBRM1-220ENST00000480064 HABP2Q14520 560 aaPredicted RBP7.12□□□□□ -1.27
PBRM1-220ENST00000480064 FAM110CQ1W6H9 321 aa7.12□□□□□ -1.27
PBRM1-220ENST00000480064 NBPF8Q3BBV2 869 aa7.12□□□□□ -1.27
PBRM1-220ENST00000480064 LCNL1Q6ZST4 164 aa7.12□□□□□ -1.27
PBRM1-220ENST00000480064 MOGAT3Q86VF5 341 aa7.12□□□□□ -1.27
PBRM1-220ENST00000480064 SIAH1Q8IUQ4 282 aa7.12□□□□□ -1.27
PBRM1-220ENST00000480064 PQLC1Q8N2U9 271 aa7.12□□□□□ -1.27
PBRM1-220ENST00000480064 SPPL3Q8TCT6 385 aa7.12□□□□□ -1.27
PBRM1-220ENST00000480064 STYXQ8WUJ0 223 aa7.12□□□□□ -1.27
PBRM1-220ENST00000480064 TNPO1Q92973 898 aaKnown RBP7.12□□□□□ -1.27
PBRM1-220ENST00000480064 TRIM43Q96BQ3 446 aaPredicted RBP7.12□□□□□ -1.27
PBRM1-220ENST00000480064 FDXACB1Q9BRP7 624 aaPredicted RBP7.12□□□□□ -1.27
PBRM1-220ENST00000480064 CHCHD6Q9BRQ6 235 aa7.12□□□□□ -1.27
PBRM1-220ENST00000480064 RXFP1Q9HBX9 757 aa7.12□□□□□ -1.27
PBRM1-220ENST00000480064 NECTIN3Q9NQS3 549 aa7.12□□□□□ -1.27
PBRM1-220ENST00000480064 TMX2Q9Y320 296 aa7.12□□□□□ -1.27
PBRM1-220ENST00000480064 FSD2A1L4K1 749 aa7.11□□□□□ -1.27
PBRM1-220ENST00000480064 HMX3A6NHT5 357 aa7.11□□□□□ -1.27
PBRM1-220ENST00000480064 ZNF839A8K0R7 811 aa7.11□□□□□ -1.27
PBRM1-220ENST00000480064 PIP5K1BO14986 540 aa7.11□□□□□ -1.27
PBRM1-220ENST00000480064 TMEM127O75204 238 aa7.11□□□□□ -1.27
PBRM1-220ENST00000480064 GPR32O75388 356 aa7.11□□□□□ -1.27
PBRM1-220ENST00000480064 TNFRSF6BO95407 300 aa7.11□□□□□ -1.27
PBRM1-220ENST00000480064 ZGLP1P0C6A0 271 aa7.11□□□□□ -1.27
PBRM1-220ENST00000480064 ZSCAN22P10073 491 aaPredicted RBP7.11□□□□□ -1.27
PBRM1-220ENST00000480064 ATP1A3P13637 1013 aa7.11□□□□□ -1.27
PBRM1-220ENST00000480064 KRT20P35900 424 aa7.11□□□□□ -1.27
PBRM1-220ENST00000480064 PIK3CGP48736 1102 aa7.11□□□□□ -1.27
PBRM1-220ENST00000480064 MAPK7Q13164 816 aa7.11□□□□□ -1.27
PBRM1-220ENST00000480064 CCNG2Q16589 344 aa7.11□□□□□ -1.27
PBRM1-220ENST00000480064 MST1LQ2TV78 715 aa7.11□□□□□ -1.27
PBRM1-220ENST00000480064 ARL6IP4Q66PJ3 421 aaKnown RBP7.11□□□□□ -1.27
PBRM1-220ENST00000480064 TANGO2Q6ICL3 276 aa7.11□□□□□ -1.27
PBRM1-220ENST00000480064 BRINP3Q76B58 766 aa7.11□□□□□ -1.27
PBRM1-220ENST00000480064 PPP1R3BQ86XI6 285 aa7.11□□□□□ -1.27
PBRM1-220ENST00000480064 TCP11L2Q8N4U5 519 aa7.11□□□□□ -1.27
PBRM1-220ENST00000480064 IFI44Q8TCB0 444 aa7.11□□□□□ -1.27
PBRM1-220ENST00000480064 IGDCC4Q8TDY8 1250 aa7.11□□□□□ -1.27
PBRM1-220ENST00000480064 CENPIQ92674 756 aaPredicted RBP7.11□□□□□ -1.27
PBRM1-220ENST00000480064 HOXB13Q92826 284 aaPredicted RBP7.11□□□□□ -1.27
PBRM1-220ENST00000480064 MAELQ96JY0 434 aaKnown RBP7.11□□□□□ -1.27
PBRM1-220ENST00000480064 PRPF18Q99633 342 aaKnown RBP7.11□□□□□ -1.27
PBRM1-220ENST00000480064 LSM14BQ9BX40 385 aaKnown RBP7.11□□□□□ -1.27
PBRM1-220ENST00000480064 AP1M1Q9BXS5 423 aa7.11□□□□□ -1.27
PBRM1-220ENST00000480064 ZNF518BQ9C0D4 1074 aa7.11□□□□□ -1.27
PBRM1-220ENST00000480064 SLAMF7Q9NQ25 335 aa7.11□□□□□ -1.27
PBRM1-220ENST00000480064 TMEM140Q9NV12 185 aa7.11□□□□□ -1.27
PBRM1-220ENST00000480064 AASSQ9UDR5 926 aa7.11□□□□□ -1.27
PBRM1-220ENST00000480064 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.11□□□□□ -1.27
PBRM1-220ENST00000480064 NPIPB6E9PJ23 425 aa7.1□□□□□ -1.27
PBRM1-220ENST00000480064 BTN3A1O00481 513 aa7.1□□□□□ -1.27
PBRM1-220ENST00000480064 SRGAP3O43295 1099 aa7.1□□□□□ -1.27
PBRM1-220ENST00000480064 FSBPO95073 299 aa7.1□□□□□ -1.27
PBRM1-220ENST00000480064 NDST3O95803 873 aa7.1□□□□□ -1.27
PBRM1-220ENST00000480064 AHSGP02765 367 aa7.1□□□□□ -1.27
PBRM1-220ENST00000480064 RPN1P04843 607 aaKnown RBP7.1□□□□□ -1.27
PBRM1-220ENST00000480064 ITGA5P08648 1049 aa7.1□□□□□ -1.27
PBRM1-220ENST00000480064 GNAI3P08754 354 aa7.1□□□□□ -1.27
PBRM1-220ENST00000480064 ALOX15P16050 662 aaPredicted RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms