RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 ZNF276Q8N554 614 aa4.99□□□□□ -1.61
SMARCA1-204ENST00000478420 OR56A1Q8NGH5 318 aa4.99□□□□□ -1.61
SMARCA1-204ENST00000478420 BRIX1Q8TDN6 353 aaKnown RBP4.99□□□□□ -1.61
SMARCA1-204ENST00000478420 NUP133Q8WUM0 1156 aa4.99□□□□□ -1.61
SMARCA1-204ENST00000478420 TNPO1Q92973 898 aaKnown RBP4.99□□□□□ -1.61
SMARCA1-204ENST00000478420 C8orf48Q96LL4 319 aa4.99□□□□□ -1.61
SMARCA1-204ENST00000478420 NEU1Q99519 415 aa4.99□□□□□ -1.61
SMARCA1-204ENST00000478420 BRD9Q9H8M2 597 aa4.99□□□□□ -1.61
SMARCA1-204ENST00000478420 FAM204AQ9H8W3 233 aa4.99□□□□□ -1.61
SMARCA1-204ENST00000478420 ARMT1Q9H993 441 aa4.99□□□□□ -1.61
SMARCA1-204ENST00000478420 SARS2Q9NP81 518 aaKnown RBP4.99□□□□□ -1.61
SMARCA1-204ENST00000478420 SLAMF7Q9NQ25 335 aa4.99□□□□□ -1.61
SMARCA1-204ENST00000478420 CFAP97Q9P2B7 532 aa4.99□□□□□ -1.61
SMARCA1-204ENST00000478420 CHST2Q9Y4C5 530 aa4.99□□□□□ -1.61
SMARCA1-204ENST00000478420 PCDHA1Q9Y5I3 950 aa4.99□□□□□ -1.61
SMARCA1-204ENST00000478420 A0A088AWK7 358 aa4.98□□□□□ -1.61
SMARCA1-204ENST00000478420 GAGE12BA1L429 117 aa4.98□□□□□ -1.61
SMARCA1-204ENST00000478420 GAGE12HA6NDE8 117 aa4.98□□□□□ -1.61
SMARCA1-204ENST00000478420 FAM227AF5H4B4 570 aa4.98□□□□□ -1.61
SMARCA1-204ENST00000478420 RNASET2O00584 256 aaKnown RBP4.98□□□□□ -1.61
SMARCA1-204ENST00000478420 ZNF185O15231 689 aa4.98□□□□□ -1.61
SMARCA1-204ENST00000478420 RPS6KA4O75676 772 aa4.98□□□□□ -1.61
SMARCA1-204ENST00000478420 TUSC2O75896 110 aa4.98□□□□□ -1.61
SMARCA1-204ENST00000478420 PRSS23O95084 383 aa4.98□□□□□ -1.61
SMARCA1-204ENST00000478420 ANXA1P04083 346 aa4.98□□□□□ -1.61
SMARCA1-204ENST00000478420 GJB1P08034 283 aa4.98□□□□□ -1.61
SMARCA1-204ENST00000478420 C1SP09871 688 aa4.98□□□□□ -1.61
SMARCA1-204ENST00000478420 INSRRP14616 1297 aa4.98□□□□□ -1.61
SMARCA1-204ENST00000478420 PTTG1IPP53801 180 aa4.98□□□□□ -1.61
SMARCA1-204ENST00000478420 FOXE3Q13461 319 aa4.98□□□□□ -1.61
SMARCA1-204ENST00000478420 FGL2Q14314 439 aa4.98□□□□□ -1.61
SMARCA1-204ENST00000478420 ANO6Q4KMQ2 910 aa4.98□□□□□ -1.61
SMARCA1-204ENST00000478420 PDCD4Q53EL6 469 aaKnown RBP4.98□□□□□ -1.61
SMARCA1-204ENST00000478420 PDSS2Q86YH6 399 aa4.98□□□□□ -1.61
SMARCA1-204ENST00000478420 PLBD2Q8NHP8 589 aa4.98□□□□□ -1.61
SMARCA1-204ENST00000478420 CACTINQ8WUQ7 758 aaKnown RBP4.98□□□□□ -1.61
SMARCA1-204ENST00000478420 SLC25A43Q8WUT9 341 aaPredicted RBP4.98□□□□□ -1.61
SMARCA1-204ENST00000478420 LRFN3Q9BTN0 628 aa4.98□□□□□ -1.61
SMARCA1-204ENST00000478420 C1orf43Q9BWL3 253 aa4.98□□□□□ -1.61
SMARCA1-204ENST00000478420 SLC46A2Q9BY10 475 aa4.98□□□□□ -1.61
SMARCA1-204ENST00000478420 MRPL46Q9H2W6 279 aaKnown RBP4.98□□□□□ -1.61
SMARCA1-204ENST00000478420 RNPEPQ9H4A4 650 aa4.98□□□□□ -1.61
SMARCA1-204ENST00000478420 CNNM1Q9NRU3 951 aa4.98□□□□□ -1.61
SMARCA1-204ENST00000478420 KLHL11Q9NVR0 708 aa4.98□□□□□ -1.61
SMARCA1-204ENST00000478420 RLIMQ9NVW2 624 aa4.98□□□□□ -1.61
SMARCA1-204ENST00000478420 OBP2AQ9NY56 170 aa4.98□□□□□ -1.61
SMARCA1-204ENST00000478420 ZDHHC8Q9ULC8 765 aa4.98□□□□□ -1.61
SMARCA1-204ENST00000478420 MYRFQ9Y2G1 1151 aa4.98□□□□□ -1.61
SMARCA1-204ENST00000478420 FRMPD2Q68DX3 1309 aaPredicted RBP4.97□□□□□ -1.61
SMARCA1-204ENST00000478420 KIF3BO15066 747 aa4.97□□□□□ -1.61
SMARCA1-204ENST00000478420 PEX11BO96011 259 aa4.97□□□□□ -1.61
SMARCA1-204ENST00000478420 HLA-DOAP06340 250 aa4.97□□□□□ -1.61
SMARCA1-204ENST00000478420 AGFG1P52594 562 aaKnown RBP4.97□□□□□ -1.61
SMARCA1-204ENST00000478420 RAB1AP62820 205 aa4.97□□□□□ -1.61
SMARCA1-204ENST00000478420 NOMO3P69849 1222 aa4.97□□□□□ -1.61
SMARCA1-204ENST00000478420 GPSM2P81274 684 aa4.97□□□□□ -1.61
SMARCA1-204ENST00000478420 MXRA7P84157 204 aa4.97□□□□□ -1.61
SMARCA1-204ENST00000478420 SLC25A3Q00325 362 aa4.97□□□□□ -1.61
SMARCA1-204ENST00000478420 GBX1Q14549 363 aa4.97□□□□□ -1.61
SMARCA1-204ENST00000478420 NOMO2Q5JPE7 1267 aa4.97□□□□□ -1.61
SMARCA1-204ENST00000478420 MIIPQ5JXC2 388 aa4.97□□□□□ -1.61
SMARCA1-204ENST00000478420 FOXR2Q6PJQ5 311 aa4.97□□□□□ -1.61
SMARCA1-204ENST00000478420 NPNTQ6UXI9 565 aa4.97□□□□□ -1.61
SMARCA1-204ENST00000478420 PPP1R3BQ86XI6 285 aa4.97□□□□□ -1.61
SMARCA1-204ENST00000478420 ZNF503Q96F45 646 aa4.97□□□□□ -1.61
SMARCA1-204ENST00000478420 MARS2Q96GW9 593 aaKnown RBP4.97□□□□□ -1.61
SMARCA1-204ENST00000478420 PNKPQ96T60 521 aa4.97□□□□□ -1.61
SMARCA1-204ENST00000478420 B3GNT5Q9BYG0 378 aa4.97□□□□□ -1.61
SMARCA1-204ENST00000478420 TMEM60Q9H2L4 133 aa4.97□□□□□ -1.61
SMARCA1-204ENST00000478420 ZNF768Q9H5H4 540 aaKnown RBP4.97□□□□□ -1.61
SMARCA1-204ENST00000478420 AKIP1Q9NQ31 210 aa4.97□□□□□ -1.61
SMARCA1-204ENST00000478420 DDX20Q9UHI6 824 aaKnown RBP4.97□□□□□ -1.61
SMARCA1-204ENST00000478420 SLC45A2Q9UMX9 530 aa4.97□□□□□ -1.61
SMARCA1-204ENST00000478420 FPGT-TNNI3KV9GXZ4 949 aa4.97□□□□□ -1.61
SMARCA1-204ENST00000478420 A0A1B0GTW7 788 aa4.96□□□□□ -1.62
SMARCA1-204ENST00000478420 CAPN8A6NHC0 703 aa4.96□□□□□ -1.62
SMARCA1-204ENST00000478420 PPFIA4O75335 1185 aa4.96□□□□□ -1.62
SMARCA1-204ENST00000478420 NCR1O76036 304 aa4.96□□□□□ -1.62
SMARCA1-204ENST00000478420 MATN4O95460 622 aa4.96□□□□□ -1.62
SMARCA1-204ENST00000478420 RARBP10826 455 aa4.96□□□□□ -1.62
SMARCA1-204ENST00000478420 PHKA1P46020 1223 aa4.96□□□□□ -1.62
SMARCA1-204ENST00000478420 PSMC1P62191 440 aaKnown RBP4.96□□□□□ -1.62
SMARCA1-204ENST00000478420 FAM189BP81408 668 aa4.96□□□□□ -1.62
SMARCA1-204ENST00000478420 DGCR2P98153 550 aa4.96□□□□□ -1.62
SMARCA1-204ENST00000478420 TUBA3CQ13748 450 aa4.96□□□□□ -1.62
SMARCA1-204ENST00000478420 KIF22Q14807 665 aa4.96□□□□□ -1.62
SMARCA1-204ENST00000478420 GRM3Q14832 879 aa4.96□□□□□ -1.62
SMARCA1-204ENST00000478420 LLGL1Q15334 1064 aa4.96□□□□□ -1.62
SMARCA1-204ENST00000478420 ZXDCQ2QGD7 858 aaPredicted RBP4.96□□□□□ -1.62
SMARCA1-204ENST00000478420 KHDC1LQ5JSQ8 128 aa4.96□□□□□ -1.62
SMARCA1-204ENST00000478420 PPP4R4Q6NUP7 873 aa4.96□□□□□ -1.62
SMARCA1-204ENST00000478420 TUBA3EQ6PEY2 450 aa4.96□□□□□ -1.62
SMARCA1-204ENST00000478420 SRGAP1Q7Z6B7 1085 aa4.96□□□□□ -1.62
SMARCA1-204ENST00000478420 DGKHQ86XP1 1220 aa4.96□□□□□ -1.62
SMARCA1-204ENST00000478420 MAPKAPK5Q8IW41 473 aa4.96□□□□□ -1.62
SMARCA1-204ENST00000478420 SYNE4Q8N205 404 aa4.96□□□□□ -1.62
SMARCA1-204ENST00000478420 SLC17A8Q8NDX2 589 aa4.96□□□□□ -1.62
SMARCA1-204ENST00000478420 KLHL32Q96NJ5 620 aa4.96□□□□□ -1.62
SMARCA1-204ENST00000478420 ZSWIM1Q9BR11 485 aa4.96□□□□□ -1.62
SMARCA1-204ENST00000478420 TEX101Q9BY14 249 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms