RNA–Protein interactions for RNA: ENST00000476791.1

SPTLC3-205, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 1 (best)

Gene SPTLC3, Length 2,480 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-205ENST00000476791 MAPRE2Q15555 327 aa6.34□□□□□ -1.39
SPTLC3-205ENST00000476791 TM4SF20Q53R12 229 aa6.34□□□□□ -1.39
SPTLC3-205ENST00000476791 FAM47CQ5HY64 1035 aa6.34□□□□□ -1.39
SPTLC3-205ENST00000476791 ZNF772Q68DY9 489 aaPredicted RBP6.34□□□□□ -1.39
SPTLC3-205ENST00000476791 HEATR6Q6AI08 1181 aaKnown RBP6.34□□□□□ -1.39
SPTLC3-205ENST00000476791 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.34□□□□□ -1.39
SPTLC3-205ENST00000476791 BEND4Q6ZU67 534 aa6.34□□□□□ -1.39
SPTLC3-205ENST00000476791 BZW1Q7L1Q6 419 aaKnown RBP6.34□□□□□ -1.39
SPTLC3-205ENST00000476791 ITPRIPQ8IWB1 547 aa6.34□□□□□ -1.39
SPTLC3-205ENST00000476791 CARFQ8N187 725 aa6.34□□□□□ -1.39
SPTLC3-205ENST00000476791 PHTF2Q8N3S3 785 aa6.34□□□□□ -1.39
SPTLC3-205ENST00000476791 ZNF527Q8NB42 609 aa6.34□□□□□ -1.39
SPTLC3-205ENST00000476791 SYN2Q92777 582 aaPredicted RBP6.34□□□□□ -1.39
SPTLC3-205ENST00000476791 ADAD1Q96M93 576 aaKnown RBP6.34□□□□□ -1.39
SPTLC3-205ENST00000476791 SIKE1Q9BRV8 207 aa6.34□□□□□ -1.39
SPTLC3-205ENST00000476791 TRIM62Q9BVG3 475 aa6.34□□□□□ -1.39
SPTLC3-205ENST00000476791 CDC23Q9UJX2 597 aa6.34□□□□□ -1.39
SPTLC3-205ENST00000476791 SLC39A10Q9ULF5 831 aa6.34□□□□□ -1.39
SPTLC3-205ENST00000476791 SLC8A2Q9UPR5 921 aa6.34□□□□□ -1.39
SPTLC3-205ENST00000476791 RWDD3Q9Y3V2 267 aa6.34□□□□□ -1.39
SPTLC3-205ENST00000476791 PCDHB4Q9Y5E5 795 aa6.34□□□□□ -1.39
SPTLC3-205ENST00000476791 PCDHGA8Q9Y5G5 932 aa6.34□□□□□ -1.39
SPTLC3-205ENST00000476791 TNKSO95271 1327 aa6.34□□□□□ -1.39
SPTLC3-205ENST00000476791 KDM2BQ8NHM5 1336 aa6.34□□□□□ -1.39
SPTLC3-205ENST00000476791 KIAA1217Q5T5P2 1943 aa6.34□□□□□ -1.39
SPTLC3-205ENST00000476791 KRT87PA6NCN2 255 aa6.34□□□□□ -1.4
SPTLC3-205ENST00000476791 F8W810 466 aa6.34□□□□□ -1.4
SPTLC3-205ENST00000476791 STX16-NPEPL1H3BU86 382 aa6.34□□□□□ -1.4
SPTLC3-205ENST00000476791 LINC01387J3KSC0 135 aa6.34□□□□□ -1.4
SPTLC3-205ENST00000476791 TRAPPC3O43617 180 aa6.34□□□□□ -1.4
SPTLC3-205ENST00000476791 SMIM24O75264 130 aa6.34□□□□□ -1.4
SPTLC3-205ENST00000476791 PALMO75781 387 aa6.34□□□□□ -1.4
SPTLC3-205ENST00000476791 ABLIM3O94929 683 aa6.34□□□□□ -1.4
SPTLC3-205ENST00000476791 IFNB1P01574 187 aa6.34□□□□□ -1.4
SPTLC3-205ENST00000476791 ENO2P09104 434 aaPredicted RBP6.34□□□□□ -1.4
SPTLC3-205ENST00000476791 MYBL1P10243 752 aa6.34□□□□□ -1.4
SPTLC3-205ENST00000476791 DLATP10515 647 aaKnown RBP6.34□□□□□ -1.4
SPTLC3-205ENST00000476791 PF4V1P10720 104 aa6.34□□□□□ -1.4
SPTLC3-205ENST00000476791 CNTFP26441 200 aa6.34□□□□□ -1.4
SPTLC3-205ENST00000476791 TXLNAP40222 546 aa6.34□□□□□ -1.4
SPTLC3-205ENST00000476791 KCNJ6P48051 423 aa6.34□□□□□ -1.4
SPTLC3-205ENST00000476791 GPX6P59796 221 aa6.34□□□□□ -1.4
SPTLC3-205ENST00000476791 SSTP61278 116 aa6.34□□□□□ -1.4
SPTLC3-205ENST00000476791 ENPEPQ07075 957 aa6.34□□□□□ -1.4
SPTLC3-205ENST00000476791 ACTN3Q08043 901 aaPredicted RBP6.34□□□□□ -1.4
SPTLC3-205ENST00000476791 NONOQ15233 471 aaKnown RBP eCLIP6.34□□□□□ -1.4
SPTLC3-205ENST00000476791 JMJD6Q6NYC1 403 aaPredicted RBP6.34□□□□□ -1.4
SPTLC3-205ENST00000476791 METTL2BQ6P1Q9 378 aaKnown RBP6.34□□□□□ -1.4
SPTLC3-205ENST00000476791 BORAQ6PGQ7 559 aa6.34□□□□□ -1.4
SPTLC3-205ENST00000476791 TMPRSS9Q7Z410 1059 aa6.34□□□□□ -1.4
SPTLC3-205ENST00000476791 CYP2U1Q7Z449 544 aa6.34□□□□□ -1.4
SPTLC3-205ENST00000476791 AKAP14Q86UN6 197 aa6.34□□□□□ -1.4
SPTLC3-205ENST00000476791 C10orf53Q8N6V4 93 aa6.34□□□□□ -1.4
SPTLC3-205ENST00000476791 BCAS4Q8TDM0 211 aa6.34□□□□□ -1.4
SPTLC3-205ENST00000476791 COG1Q8WTW3 980 aa6.34□□□□□ -1.4
SPTLC3-205ENST00000476791 MAIP1Q8WWC4 291 aa6.34□□□□□ -1.4
SPTLC3-205ENST00000476791 KRT35Q92764 455 aa6.34□□□□□ -1.4
SPTLC3-205ENST00000476791 INPP5DQ92835 1189 aa6.34□□□□□ -1.4
SPTLC3-205ENST00000476791 SEC62Q99442 399 aaKnown RBP6.34□□□□□ -1.4
SPTLC3-205ENST00000476791 ISCA1Q9BUE6 129 aa6.34□□□□□ -1.4
SPTLC3-205ENST00000476791 STMN4Q9H169 189 aaPredicted RBP6.34□□□□□ -1.4
SPTLC3-205ENST00000476791 SMOC1Q9H4F8 434 aa6.34□□□□□ -1.4
SPTLC3-205ENST00000476791 DENND2DQ9H6A0 471 aaPredicted RBP6.34□□□□□ -1.4
SPTLC3-205ENST00000476791 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.34□□□□□ -1.4
SPTLC3-205ENST00000476791 THAP1Q9NVV9 213 aa6.34□□□□□ -1.4
SPTLC3-205ENST00000476791 PAQR5Q9NXK6 330 aaPredicted RBP6.34□□□□□ -1.4
SPTLC3-205ENST00000476791 TBC1D14Q9P2M4 693 aa6.34□□□□□ -1.4
SPTLC3-205ENST00000476791 SALL4Q9UJQ4 1053 aa6.34□□□□□ -1.4
SPTLC3-205ENST00000476791 DNMT3AQ9Y6K1 912 aaPredicted RBP6.34□□□□□ -1.4
SPTLC3-205ENST00000476791 TRBV23OR9-2A0A075B6M9 112 aa6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 TYW5A2RUC4 315 aaKnown RBP6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 NCF1BA6NI72 391 aaPredicted RBP6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 NCF1CA8MVU1 366 aaPredicted RBP6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 ALG1L2C9J202 215 aa6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 GOLGA8SH3BPF8 625 aa6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 GABRDO14764 452 aa6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 RAD51BO15315 384 aa6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 DYNC1LI2O43237 492 aaPredicted RBP6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 AOC2O75106 756 aa6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 LCA5LO95447 670 aa6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 CHRNB1P11230 501 aa6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 GMPRP36959 345 aa6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 PSMC4P43686 418 aa6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 ALDH5A1P51649 535 aaPredicted RBP6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 ARSDP51689 593 aa6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 AFF1P51825 1210 aaKnown RBP6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 VCPP55072 806 aaKnown RBP6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 CASP9P55211 416 aa6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 MAP3K7CLP57077 242 aa6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 HADHQ16836 314 aaKnown RBP6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 ZNF423Q2M1K9 1284 aa6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 ZNF674Q2M3X9 581 aa6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 PLA2G4EQ3MJ16 856 aa6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 ARL13BQ3SXY8 428 aa6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 DUS1LQ6P1R4 473 aaKnown RBP6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 USP50Q70EL3 339 aaPredicted RBP6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 DHX32Q7L7V1 743 aaKnown RBP6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 OR56B2PQ8NGI1 322 aa6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 ZNF507Q8TCN5 953 aa6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 STARD8Q92502 1023 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms