RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 JKAMPQ9P055 326 aa4.22□□□□□ -1.73
ECHDC1-213ENST00000474240 CFAP97Q9P2B7 532 aa4.22□□□□□ -1.73
ECHDC1-213ENST00000474240 ATP11BQ9Y2G3 1177 aa4.22□□□□□ -1.73
ECHDC1-213ENST00000474240 NEU2Q9Y3R4 380 aa4.22□□□□□ -1.73
ECHDC1-213ENST00000474240 PCDHB1Q9Y5F3 818 aa4.22□□□□□ -1.73
ECHDC1-213ENST00000474240 MASP2O00187 686 aa4.21□□□□□ -1.74
ECHDC1-213ENST00000474240 SCAF4O95104 1147 aaKnown RBP4.21□□□□□ -1.74
ECHDC1-213ENST00000474240 NUDT3O95989 172 aa4.21□□□□□ -1.74
ECHDC1-213ENST00000474240 CHEK2O96017 543 aa4.21□□□□□ -1.74
ECHDC1-213ENST00000474240 CD1AP06126 327 aa4.21□□□□□ -1.74
ECHDC1-213ENST00000474240 MALP21145 153 aa4.21□□□□□ -1.74
ECHDC1-213ENST00000474240 FPR1P21462 350 aa4.21□□□□□ -1.74
ECHDC1-213ENST00000474240 GCSHP23434 173 aa4.21□□□□□ -1.74
ECHDC1-213ENST00000474240 ADRA1BP35368 520 aa4.21□□□□□ -1.74
ECHDC1-213ENST00000474240 NHLH2Q02577 135 aa4.21□□□□□ -1.74
ECHDC1-213ENST00000474240 HLTFQ14527 1009 aaKnown RBP eCLIP4.21□□□□□ -1.74
ECHDC1-213ENST00000474240 GFOD2Q3B7J2 385 aa4.21□□□□□ -1.74
ECHDC1-213ENST00000474240 CCDC157Q569K6 752 aa4.21□□□□□ -1.74
ECHDC1-213ENST00000474240 AGAP9Q5VTM2 703 aa4.21□□□□□ -1.74
ECHDC1-213ENST00000474240 ANKS6Q68DC2 871 aa4.21□□□□□ -1.74
ECHDC1-213ENST00000474240 DENND1CQ8IV53 801 aa4.21□□□□□ -1.74
ECHDC1-213ENST00000474240 ULK2Q8IYT8 1036 aa4.21□□□□□ -1.74
ECHDC1-213ENST00000474240 MYO1HQ8N1T3 1032 aa4.21□□□□□ -1.74
ECHDC1-213ENST00000474240 ZGPATQ8N5A5 531 aaKnown RBP4.21□□□□□ -1.74
ECHDC1-213ENST00000474240 CAMKK1Q8N5S9 505 aa4.21□□□□□ -1.74
ECHDC1-213ENST00000474240 SLC25A43Q8WUT9 341 aaPredicted RBP4.21□□□□□ -1.74
ECHDC1-213ENST00000474240 DDX17Q92841 729 aaKnown RBP4.21□□□□□ -1.74
ECHDC1-213ENST00000474240 KAT5Q92993 513 aa4.21□□□□□ -1.74
ECHDC1-213ENST00000474240 PGBD4Q96DM1 585 aa4.21□□□□□ -1.74
ECHDC1-213ENST00000474240 LDAHQ9H6V9 325 aa4.21□□□□□ -1.74
ECHDC1-213ENST00000474240 C1orf112Q9NSG2 853 aa4.21□□□□□ -1.74
ECHDC1-213ENST00000474240 RNF181Q9P0P0 153 aa4.21□□□□□ -1.74
ECHDC1-213ENST00000474240 PTGFRNQ9P2B2 879 aa4.21□□□□□ -1.74
ECHDC1-213ENST00000474240 KLHL42Q9P2K6 505 aa4.21□□□□□ -1.74
ECHDC1-213ENST00000474240 ZDHHC8Q9ULC8 765 aa4.21□□□□□ -1.74
ECHDC1-213ENST00000474240 G3BP2Q9UN86 482 aaKnown RBP4.21□□□□□ -1.74
ECHDC1-213ENST00000474240 SORCS3Q9UPU3 1222 aa4.21□□□□□ -1.74
ECHDC1-213ENST00000474240 RUVBL1Q9Y265 456 aaKnown RBP4.21□□□□□ -1.74
ECHDC1-213ENST00000474240 STXBP5LQ9Y2K9 1186 aa4.21□□□□□ -1.74
ECHDC1-213ENST00000474240 DRGXA6NNA5 263 aa4.2□□□□□ -1.74
ECHDC1-213ENST00000474240 GRXCR1A8MXD5 290 aa4.2□□□□□ -1.74
ECHDC1-213ENST00000474240 FAM227AF5H4B4 570 aa4.2□□□□□ -1.74
ECHDC1-213ENST00000474240 KIAA0391O15091 583 aaKnown RBP4.2□□□□□ -1.74
ECHDC1-213ENST00000474240 GRM6O15303 877 aa4.2□□□□□ -1.74
ECHDC1-213ENST00000474240 SLC43A1O75387 559 aa4.2□□□□□ -1.74
ECHDC1-213ENST00000474240 CKBP12277 381 aa4.2□□□□□ -1.74
ECHDC1-213ENST00000474240 LPOP22079 712 aaPredicted RBP4.2□□□□□ -1.74
ECHDC1-213ENST00000474240 BLOC1S1P78537 153 aa4.2□□□□□ -1.74
ECHDC1-213ENST00000474240 DSC2Q02487 901 aa4.2□□□□□ -1.74
ECHDC1-213ENST00000474240 SPDYE7PQ495Y7 208 aa4.2□□□□□ -1.74
ECHDC1-213ENST00000474240 LAIR1Q6GTX8 287 aa4.2□□□□□ -1.74
ECHDC1-213ENST00000474240 FOXR2Q6PJQ5 311 aa4.2□□□□□ -1.74
ECHDC1-213ENST00000474240 ZNF365Q70YC5 407 aa4.2□□□□□ -1.74
ECHDC1-213ENST00000474240 MED25Q71SY5 747 aa4.2□□□□□ -1.74
ECHDC1-213ENST00000474240 CATIPQ7Z7H3 387 aa4.2□□□□□ -1.74
ECHDC1-213ENST00000474240 GRAMD1CQ8IYS0 662 aa4.2□□□□□ -1.74
ECHDC1-213ENST00000474240 FAM43AQ8N2R8 423 aa4.2□□□□□ -1.74
ECHDC1-213ENST00000474240 ZNF276Q8N554 614 aa4.2□□□□□ -1.74
ECHDC1-213ENST00000474240 RNF169Q8NCN4 708 aa4.2□□□□□ -1.74
ECHDC1-213ENST00000474240 SLC35G2Q8TBE7 412 aa4.2□□□□□ -1.74
ECHDC1-213ENST00000474240 CPT1CQ8TCG5 803 aa4.2□□□□□ -1.74
ECHDC1-213ENST00000474240 BRIX1Q8TDN6 353 aaKnown RBP4.2□□□□□ -1.74
ECHDC1-213ENST00000474240 DIS3LQ8TF46 1054 aaKnown RBP4.2□□□□□ -1.74
ECHDC1-213ENST00000474240 NTN5Q8WTR8 489 aaPredicted RBP4.2□□□□□ -1.74
ECHDC1-213ENST00000474240 STON2Q8WXE9 905 aa4.2□□□□□ -1.74
ECHDC1-213ENST00000474240 LENG9Q96B70 501 aa4.2□□□□□ -1.74
ECHDC1-213ENST00000474240 PNKPQ96T60 521 aa4.2□□□□□ -1.74
ECHDC1-213ENST00000474240 FAM204AQ9H8W3 233 aa4.2□□□□□ -1.74
ECHDC1-213ENST00000474240 PRDM11Q9NQV5 511 aa4.2□□□□□ -1.74
ECHDC1-213ENST00000474240 CNNM1Q9NRU3 951 aa4.2□□□□□ -1.74
ECHDC1-213ENST00000474240 LMBRD1Q9NUN5 540 aa4.2□□□□□ -1.74
ECHDC1-213ENST00000474240 SLC23A1Q9UHI7 598 aa4.2□□□□□ -1.74
ECHDC1-213ENST00000474240 CHST2Q9Y4C5 530 aa4.2□□□□□ -1.74
ECHDC1-213ENST00000474240 PAXBP1Q9Y5B6 917 aa4.2□□□□□ -1.74
ECHDC1-213ENST00000474240 TMEM191CA6NGB0 347 aa4.19□□□□□ -1.74
ECHDC1-213ENST00000474240 AP1G1O43747 822 aa4.19□□□□□ -1.74
ECHDC1-213ENST00000474240 GNAI2P04899 355 aa4.19□□□□□ -1.74
ECHDC1-213ENST00000474240 ITGB6P18564 788 aa4.19□□□□□ -1.74
ECHDC1-213ENST00000474240 LAG3P18627 525 aa4.19□□□□□ -1.74
ECHDC1-213ENST00000474240 APOBEC3AP31941 199 aaPredicted RBP4.19□□□□□ -1.74
ECHDC1-213ENST00000474240 BMPR1AP36894 532 aa4.19□□□□□ -1.74
ECHDC1-213ENST00000474240 PIK3CGP48736 1102 aa4.19□□□□□ -1.74
ECHDC1-213ENST00000474240 CHN2P52757 468 aa4.19□□□□□ -1.74
ECHDC1-213ENST00000474240 GPSM2P81274 684 aa4.19□□□□□ -1.74
ECHDC1-213ENST00000474240 PIGFQ07326 219 aa4.19□□□□□ -1.74
ECHDC1-213ENST00000474240 MLC1Q15049 377 aa4.19□□□□□ -1.74
ECHDC1-213ENST00000474240 KHDC1Q4VXA5 237 aaKnown RBP4.19□□□□□ -1.74
ECHDC1-213ENST00000474240 FAM102AQ5T9C2 384 aaPredicted RBP4.19□□□□□ -1.74
ECHDC1-213ENST00000474240 EPM2AIP1Q7L775 607 aaPredicted RBP4.19□□□□□ -1.74
ECHDC1-213ENST00000474240 HEATR3Q7Z4Q2 680 aa4.19□□□□□ -1.74
ECHDC1-213ENST00000474240 FBXO18Q8NFZ0 1043 aa4.19□□□□□ -1.74
ECHDC1-213ENST00000474240 HAS1Q92839 578 aa4.19□□□□□ -1.74
ECHDC1-213ENST00000474240 MYEOVQ96EZ4 313 aa4.19□□□□□ -1.74
ECHDC1-213ENST00000474240 TAAR9Q96RI9 348 aa4.19□□□□□ -1.74
ECHDC1-213ENST00000474240 SARS2Q9NP81 518 aaKnown RBP4.19□□□□□ -1.74
ECHDC1-213ENST00000474240 GEMIN8Q9NWZ8 242 aaKnown RBP4.19□□□□□ -1.74
ECHDC1-213ENST00000474240 TRPM5Q9NZQ8 1165 aa4.19□□□□□ -1.74
ECHDC1-213ENST00000474240 KCNE5Q9UJ90 142 aa4.19□□□□□ -1.74
ECHDC1-213ENST00000474240 FPGT-TNNI3KV9GXZ4 949 aa4.19□□□□□ -1.74
ECHDC1-213ENST00000474240 PNPLA7Q6ZV29 1317 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms