RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 SLFN5Q08AF3 891 aa7.21□□□□□ -1.26
CLK1-209ENST00000472679 GALEQ14376 348 aa7.21□□□□□ -1.26
CLK1-209ENST00000472679 NPNTQ6UXI9 565 aa7.21□□□□□ -1.26
CLK1-209ENST00000472679 ZNF365Q70YC5 407 aa7.21□□□□□ -1.26
CLK1-209ENST00000472679 GDF7Q7Z4P5 450 aa7.21□□□□□ -1.26
CLK1-209ENST00000472679 RHOT2Q8IXI1 618 aa7.21□□□□□ -1.26
CLK1-209ENST00000472679 TIFAQ96CG3 184 aa7.21□□□□□ -1.26
CLK1-209ENST00000472679 WDCPQ9H6R7 721 aa7.21□□□□□ -1.26
CLK1-209ENST00000472679 SLAMF7Q9NQ25 335 aa7.21□□□□□ -1.26
CLK1-209ENST00000472679 KLHL11Q9NVR0 708 aa7.21□□□□□ -1.26
CLK1-209ENST00000472679 A0A088AWK7 358 aa7.2□□□□□ -1.26
CLK1-209ENST00000472679 KRTAP4-8A0A0G2JLE6 195 aa7.2□□□□□ -1.26
CLK1-209ENST00000472679 RPS6KA4O75676 772 aa7.2□□□□□ -1.26
CLK1-209ENST00000472679 ZFP36P26651 326 aaKnown RBP7.2□□□□□ -1.26
CLK1-209ENST00000472679 IL12RB1P42701 662 aa7.2□□□□□ -1.26
CLK1-209ENST00000472679 PIK3CGP48736 1102 aa7.2□□□□□ -1.26
CLK1-209ENST00000472679 AGFG1P52594 562 aaKnown RBP7.2□□□□□ -1.26
CLK1-209ENST00000472679 RAB1AP62820 205 aa7.2□□□□□ -1.26
CLK1-209ENST00000472679 GBX1Q14549 363 aa7.2□□□□□ -1.26
CLK1-209ENST00000472679 DAAM2Q86T65 1068 aa7.2□□□□□ -1.26
CLK1-209ENST00000472679 OR56A1Q8NGH5 318 aa7.2□□□□□ -1.26
CLK1-209ENST00000472679 CACTINQ8WUQ7 758 aaKnown RBP7.2□□□□□ -1.26
CLK1-209ENST00000472679 TNPO1Q92973 898 aaKnown RBP7.2□□□□□ -1.26
CLK1-209ENST00000472679 MARS2Q96GW9 593 aaKnown RBP7.2□□□□□ -1.26
CLK1-209ENST00000472679 FAM167AQ96KS9 214 aa7.2□□□□□ -1.26
CLK1-209ENST00000472679 KLHL32Q96NJ5 620 aa7.2□□□□□ -1.26
CLK1-209ENST00000472679 PLEKHG4BQ96PX9 1271 aa7.2□□□□□ -1.26
CLK1-209ENST00000472679 DCLRE1CQ96SD1 692 aaKnown RBP7.2□□□□□ -1.26
CLK1-209ENST00000472679 ZSWIM1Q9BR11 485 aa7.2□□□□□ -1.26
CLK1-209ENST00000472679 TLR10Q9BXR5 811 aa7.2□□□□□ -1.26
CLK1-209ENST00000472679 TMEM60Q9H2L4 133 aa7.2□□□□□ -1.26
CLK1-209ENST00000472679 PARPBPQ9NWS1 579 aa7.2□□□□□ -1.26
CLK1-209ENST00000472679 SIDT1Q9NXL6 827 aaKnown RBP7.2□□□□□ -1.26
CLK1-209ENST00000472679 AATKQ6ZMQ8 1374 aa7.2□□□□□ -1.26
CLK1-209ENST00000472679 RECQL4O94761 1208 aa7.19□□□□□ -1.26
CLK1-209ENST00000472679 MATN4O95460 622 aa7.19□□□□□ -1.26
CLK1-209ENST00000472679 CKBP12277 381 aa7.19□□□□□ -1.26
CLK1-209ENST00000472679 FCER1AP12319 257 aa7.19□□□□□ -1.26
CLK1-209ENST00000472679 USP14P54578 494 aa7.19□□□□□ -1.26
CLK1-209ENST00000472679 SWSAP1Q6NVH7 229 aa7.19□□□□□ -1.26
CLK1-209ENST00000472679 LRRC55Q6ZSA7 311 aa7.19□□□□□ -1.26
CLK1-209ENST00000472679 TMIEQ8NEW7 156 aa7.19□□□□□ -1.26
CLK1-209ENST00000472679 ZNF503Q96F45 646 aa7.19□□□□□ -1.26
CLK1-209ENST00000472679 VSX1Q9NZR4 365 aaPredicted RBP7.19□□□□□ -1.26
CLK1-209ENST00000472679 USP25Q9UHP3 1055 aa7.19□□□□□ -1.26
CLK1-209ENST00000472679 PCDHA6Q9UN73 950 aa7.19□□□□□ -1.26
CLK1-209ENST00000472679 FRMPD2Q68DX3 1309 aaPredicted RBP7.19□□□□□ -1.26
CLK1-209ENST00000472679 NCR1O76036 304 aa7.18□□□□□ -1.26
CLK1-209ENST00000472679 GJB1P08034 283 aa7.18□□□□□ -1.26
CLK1-209ENST00000472679 ELANEP08246 267 aa7.18□□□□□ -1.26
CLK1-209ENST00000472679 INSRRP14616 1297 aa7.18□□□□□ -1.26
CLK1-209ENST00000472679 HDCP19113 662 aa7.18□□□□□ -1.26
CLK1-209ENST00000472679 PSMC1P62191 440 aaKnown RBP7.18□□□□□ -1.26
CLK1-209ENST00000472679 FOXE3Q13461 319 aa7.18□□□□□ -1.26
CLK1-209ENST00000472679 ANO6Q4KMQ2 910 aa7.18□□□□□ -1.26
CLK1-209ENST00000472679 CYB5RLQ6IPT4 315 aa7.18□□□□□ -1.26
CLK1-209ENST00000472679 KIAA0319LQ8IZA0 1049 aa7.18□□□□□ -1.26
CLK1-209ENST00000472679 BRD9Q9H8M2 597 aa7.18□□□□□ -1.26
CLK1-209ENST00000472679 HSFX1Q9UBD0 423 aa7.18□□□□□ -1.26
CLK1-209ENST00000472679 CPA4Q9UI42 421 aa7.18□□□□□ -1.26
CLK1-209ENST00000472679 ATP11BQ9Y2G3 1177 aa7.18□□□□□ -1.26
CLK1-209ENST00000472679 MAP3K2Q9Y2U5 619 aa7.18□□□□□ -1.26
CLK1-209ENST00000472679 A0A1B0GTW7 788 aa7.17□□□□□ -1.26
CLK1-209ENST00000472679 DIRC3C9JPN6 131 aa7.17□□□□□ -1.26
CLK1-209ENST00000472679 E9PLN8 166 aa7.17□□□□□ -1.26
CLK1-209ENST00000472679 GNAI3P08754 354 aa7.17□□□□□ -1.26
CLK1-209ENST00000472679 GNAI1P63096 354 aa7.17□□□□□ -1.26
CLK1-209ENST00000472679 OCA2Q04671 838 aa7.17□□□□□ -1.26
CLK1-209ENST00000472679 EXOSC9Q06265 439 aaKnown RBP7.17□□□□□ -1.26
CLK1-209ENST00000472679 FGL2Q14314 439 aa7.17□□□□□ -1.26
CLK1-209ENST00000472679 KIF22Q14807 665 aa7.17□□□□□ -1.26
CLK1-209ENST00000472679 CHST15Q7LFX5 561 aaPredicted RBP7.17□□□□□ -1.26
CLK1-209ENST00000472679 DGKHQ86XP1 1220 aa7.17□□□□□ -1.26
CLK1-209ENST00000472679 ZNF276Q8N554 614 aa7.17□□□□□ -1.26
CLK1-209ENST00000472679 SLC17A8Q8NDX2 589 aa7.17□□□□□ -1.26
CLK1-209ENST00000472679 NUP133Q8WUM0 1156 aa7.17□□□□□ -1.26
CLK1-209ENST00000472679 VKORC1Q9BQB6 163 aa7.17□□□□□ -1.26
CLK1-209ENST00000472679 SLC46A2Q9BY10 475 aa7.17□□□□□ -1.26
CLK1-209ENST00000472679 IMPG2Q9BZV3 1241 aa7.17□□□□□ -1.26
CLK1-209ENST00000472679 ZMAT3Q9HA38 289 aaKnown RBP7.17□□□□□ -1.26
CLK1-209ENST00000472679 ATP6V0A4Q9HBG4 840 aa7.17□□□□□ -1.26
CLK1-209ENST00000472679 AKIP1Q9NQ31 210 aa7.17□□□□□ -1.26
CLK1-209ENST00000472679 PRDM11Q9NQV5 511 aa7.17□□□□□ -1.26
CLK1-209ENST00000472679 GNL3LQ9NVN8 582 aaKnown RBP7.17□□□□□ -1.26
CLK1-209ENST00000472679 L1RE1Q9UN81 338 aa7.17□□□□□ -1.26
CLK1-209ENST00000472679 ZNF785A8K8V0 405 aa7.16□□□□□ -1.26
CLK1-209ENST00000472679 FGFR4P22455 802 aa7.16□□□□□ -1.26
CLK1-209ENST00000472679 HSD11B2P80365 405 aa7.16□□□□□ -1.26
CLK1-209ENST00000472679 HSP90AB2PQ58FF8 381 aa7.16□□□□□ -1.26
CLK1-209ENST00000472679 KHDC1LQ5JSQ8 128 aa7.16□□□□□ -1.26
CLK1-209ENST00000472679 FAM156AQ8NDB6 213 aa7.16□□□□□ -1.26
CLK1-209ENST00000472679 BRIX1Q8TDN6 353 aaKnown RBP7.16□□□□□ -1.26
CLK1-209ENST00000472679 MTFMTQ96DP5 389 aaKnown RBP7.16□□□□□ -1.26
CLK1-209ENST00000472679 REXO4Q9GZR2 422 aaKnown RBP7.16□□□□□ -1.26
CLK1-209ENST00000472679 SLC2A4RGQ9NR83 387 aa7.16□□□□□ -1.26
CLK1-209ENST00000472679 MRPS18AQ9NVS2 196 aaKnown RBP7.16□□□□□ -1.26
CLK1-209ENST00000472679 CFAP97Q9P2B7 532 aa7.16□□□□□ -1.26
CLK1-209ENST00000472679 AGAP1Q9UPQ3 857 aa7.16□□□□□ -1.26
CLK1-209ENST00000472679 CAPN8A6NHC0 703 aa7.15□□□□□ -1.26
CLK1-209ENST00000472679 FAM227AF5H4B4 570 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms