RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 SLC8B1Q6J4K2 584 aa9.92□□□□□ -0.82
SF3A1-206ENST00000471037 ANKS3Q6ZW76 656 aa9.92□□□□□ -0.82
SF3A1-206ENST00000471037 DCLK2Q8N568 766 aa9.92□□□□□ -0.82
SF3A1-206ENST00000471037 C3orf58Q8NDZ4 430 aa9.92□□□□□ -0.82
SF3A1-206ENST00000471037 ERMNQ8TAM6 284 aa9.92□□□□□ -0.82
SF3A1-206ENST00000471037 DEPTORQ8TB45 409 aa9.92□□□□□ -0.82
SF3A1-206ENST00000471037 GPT2Q8TD30 523 aa9.92□□□□□ -0.82
SF3A1-206ENST00000471037 NELL2Q99435 816 aa9.92□□□□□ -0.82
SF3A1-206ENST00000471037 SPATA6Q9NWH7 488 aaPredicted RBP9.92□□□□□ -0.82
SF3A1-206ENST00000471037 USP20Q9Y2K6 914 aa9.92□□□□□ -0.82
SF3A1-206ENST00000471037 GDAQ9Y2T3 454 aa9.92□□□□□ -0.82
SF3A1-206ENST00000471037 MRPS23Q9Y3D9 190 aaKnown RBP9.92□□□□□ -0.82
SF3A1-206ENST00000471037 MTF2Q9Y483 593 aaPredicted RBP9.92□□□□□ -0.82
SF3A1-206ENST00000471037 DOCK6Q96HP0 2047 aa9.92□□□□□ -0.82
SF3A1-206ENST00000471037 NOTCH4Q99466 2003 aa9.92□□□□□ -0.82
SF3A1-206ENST00000471037 CACNA1IQ9P0X4 2223 aa9.91□□□□□ -0.82
SF3A1-206ENST00000471037 FAM170BA6NMN3 283 aa9.91□□□□□ -0.82
SF3A1-206ENST00000471037 NCAM2O15394 837 aa9.91□□□□□ -0.82
SF3A1-206ENST00000471037 LILRB5O75023 590 aa9.91□□□□□ -0.82
SF3A1-206ENST00000471037 ABLIM3O94929 683 aa9.91□□□□□ -0.82
SF3A1-206ENST00000471037 RHOP08100 348 aa9.91□□□□□ -0.82
SF3A1-206ENST00000471037 LIG1P18858 919 aa9.91□□□□□ -0.82
SF3A1-206ENST00000471037 TARSP26639 723 aaKnown RBP9.91□□□□□ -0.82
SF3A1-206ENST00000471037 TKTP29401 623 aaKnown RBP9.91□□□□□ -0.82
SF3A1-206ENST00000471037 SYKP43405 635 aa9.91□□□□□ -0.82
SF3A1-206ENST00000471037 NDUFA8P51970 172 aa9.91□□□□□ -0.82
SF3A1-206ENST00000471037 ROR1Q01973 937 aa9.91□□□□□ -0.82
SF3A1-206ENST00000471037 SLC5A9Q2M3M2 681 aa9.91□□□□□ -0.82
SF3A1-206ENST00000471037 XKR4Q5GH76 650 aa9.91□□□□□ -0.82
SF3A1-206ENST00000471037 ZBTB41Q5SVQ8 909 aa9.91□□□□□ -0.82
SF3A1-206ENST00000471037 NT5DC1Q5TFE4 455 aa9.91□□□□□ -0.82
SF3A1-206ENST00000471037 ATF7IP2Q5U623 682 aa9.91□□□□□ -0.82
SF3A1-206ENST00000471037 KRT79Q5XKE5 535 aa9.91□□□□□ -0.82
SF3A1-206ENST00000471037 TPRG1Q6ZUI0 275 aa9.91□□□□□ -0.82
SF3A1-206ENST00000471037 APBB1IPQ7Z5R6 666 aaPredicted RBP9.91□□□□□ -0.82
SF3A1-206ENST00000471037 FMR1NBQ8N0W7 255 aaPredicted RBP9.91□□□□□ -0.82
SF3A1-206ENST00000471037 GPR161Q8N6U8 529 aaKnown RBP9.91□□□□□ -0.82
SF3A1-206ENST00000471037 ENGASEQ8NFI3 743 aa9.91□□□□□ -0.82
SF3A1-206ENST00000471037 ZNF461Q8TAF7 563 aa9.91□□□□□ -0.82
SF3A1-206ENST00000471037 SNX29Q8TEQ0 813 aa9.91□□□□□ -0.82
SF3A1-206ENST00000471037 ING5Q8WYH8 240 aa9.91□□□□□ -0.82
SF3A1-206ENST00000471037 KIFAP3Q92845 792 aa9.91□□□□□ -0.82
SF3A1-206ENST00000471037 DNASE1L2Q92874 299 aa9.91□□□□□ -0.82
SF3A1-206ENST00000471037 SYAP1Q96A49 352 aaPredicted RBP9.91□□□□□ -0.82
SF3A1-206ENST00000471037 ELSPBP1Q96BH3 223 aa9.91□□□□□ -0.82
SF3A1-206ENST00000471037 CALML4Q96GE6 196 aa9.91□□□□□ -0.82
SF3A1-206ENST00000471037 EPSTI1Q96J88 318 aa9.91□□□□□ -0.82
SF3A1-206ENST00000471037 KIFC3Q9BVG8 833 aa9.91□□□□□ -0.82
SF3A1-206ENST00000471037 EPC1Q9H2F5 836 aa9.91□□□□□ -0.82
SF3A1-206ENST00000471037 GOLPH3LQ9H4A5 285 aa9.91□□□□□ -0.82
SF3A1-206ENST00000471037 GOLGA2P5Q9HBQ8 144 aa9.91□□□□□ -0.82
SF3A1-206ENST00000471037 PRMT8Q9NR22 394 aaPredicted RBP9.91□□□□□ -0.82
SF3A1-206ENST00000471037 DDX19AQ9NUU7 478 aaKnown RBP9.91□□□□□ -0.82
SF3A1-206ENST00000471037 CCDC39Q9UFE4 941 aa9.91□□□□□ -0.82
SF3A1-206ENST00000471037 USP25Q9UHP3 1055 aa9.91□□□□□ -0.82
SF3A1-206ENST00000471037 TNFSF13BQ9Y275 285 aa9.91□□□□□ -0.82
SF3A1-206ENST00000471037 GPR179Q6PRD1 2367 aa9.9□□□□□ -0.82
SF3A1-206ENST00000471037 PHLPP2Q6ZVD8 1323 aa9.9□□□□□ -0.82
SF3A1-206ENST00000471037 CEP250Q9BV73 2442 aa9.9□□□□□ -0.82
SF3A1-206ENST00000471037 SMIM28A0A1B0GU29 152 aa9.9□□□□□ -0.82
SF3A1-206ENST00000471037 WDR27A2RRH5 827 aa9.9□□□□□ -0.82
SF3A1-206ENST00000471037 SHISA7A6NL88 538 aa9.9□□□□□ -0.82
SF3A1-206ENST00000471037 PP2D1A8MPX8 630 aa9.9□□□□□ -0.82
SF3A1-206ENST00000471037 SYN3O14994 580 aa9.9□□□□□ -0.82
SF3A1-206ENST00000471037 TBC1D4O60343 1298 aa9.9□□□□□ -0.82
SF3A1-206ENST00000471037 MICAL2O94851 1124 aa9.9□□□□□ -0.82
SF3A1-206ENST00000471037 LRG1P02750 347 aa9.9□□□□□ -0.82
SF3A1-206ENST00000471037 CEBPBP17676 345 aa9.9□□□□□ -0.82
SF3A1-206ENST00000471037 PTPN2P17706 415 aa9.9□□□□□ -0.82
SF3A1-206ENST00000471037 CD72P21854 359 aa9.9□□□□□ -0.82
SF3A1-206ENST00000471037 FCARP24071 287 aa9.9□□□□□ -0.82
SF3A1-206ENST00000471037 GRM5P41594 1212 aa9.9□□□□□ -0.82
SF3A1-206ENST00000471037 BRCC3P46736 316 aa9.9□□□□□ -0.82
SF3A1-206ENST00000471037 CSTF1Q05048 431 aaKnown RBP9.9□□□□□ -0.82
SF3A1-206ENST00000471037 SOX4Q06945 474 aaPredicted RBP9.9□□□□□ -0.82
SF3A1-206ENST00000471037 FZD5Q13467 585 aa9.9□□□□□ -0.82
SF3A1-206ENST00000471037 PRSS36Q5K4E3 855 aa9.9□□□□□ -0.82
SF3A1-206ENST00000471037 VARS2Q5ST30 1063 aaKnown RBP9.9□□□□□ -0.82
SF3A1-206ENST00000471037 POTEHQ6S545 545 aa9.9□□□□□ -0.82
SF3A1-206ENST00000471037 ALKAL1Q6UXT8 129 aa9.9□□□□□ -0.82
SF3A1-206ENST00000471037 ZNF852Q6ZMS4 543 aa9.9□□□□□ -0.82
SF3A1-206ENST00000471037 MAMSTRQ6ZN01 415 aa9.9□□□□□ -0.82
SF3A1-206ENST00000471037 USP49Q70CQ1 688 aa9.9□□□□□ -0.82
SF3A1-206ENST00000471037 TCEAL8Q8IYN2 117 aa9.9□□□□□ -0.82
SF3A1-206ENST00000471037 KCTD17Q8N5Z5 321 aa9.9□□□□□ -0.82
SF3A1-206ENST00000471037 IQUBQ8NA54 791 aa9.9□□□□□ -0.82
SF3A1-206ENST00000471037 RASSF8Q8NHQ8 419 aa9.9□□□□□ -0.82
SF3A1-206ENST00000471037 ATRIPQ8WXE1 791 aa9.9□□□□□ -0.82
SF3A1-206ENST00000471037 MCRS1Q96EZ8 462 aa9.9□□□□□ -0.82
SF3A1-206ENST00000471037 CCDC34Q96HJ3 373 aa9.9□□□□□ -0.82
SF3A1-206ENST00000471037 CDK5RAP3Q96JB5 506 aa9.9□□□□□ -0.82
SF3A1-206ENST00000471037 IFT74Q96LB3 600 aa9.9□□□□□ -0.82
SF3A1-206ENST00000471037 TIGD1Q96MW7 591 aa9.9□□□□□ -0.82
SF3A1-206ENST00000471037 MMTAG2Q9BU76 263 aaKnown RBP9.9□□□□□ -0.82
SF3A1-206ENST00000471037 FAM126AQ9BYI3 521 aaPredicted RBP9.9□□□□□ -0.82
SF3A1-206ENST00000471037 PLA2G2FQ9BZM2 168 aa9.9□□□□□ -0.82
SF3A1-206ENST00000471037 PTPRHQ9HD43 1115 aa9.9□□□□□ -0.82
SF3A1-206ENST00000471037 TOPORSQ9NS56 1045 aaPredicted RBP9.9□□□□□ -0.82
SF3A1-206ENST00000471037 SLC38A7Q9NVC3 462 aa9.9□□□□□ -0.82
SF3A1-206ENST00000471037 ZSCAN32Q9NX65 697 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms