RNA–Protein interactions for RNA: ENST00000465902.1

USP19-210, Transcript of ubiquitin specific peptidase 19, human

TSL 3

Gene USP19, Length 617 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP19-210	ENST00000465902	KIAA1586	Q9HCI6	787 aa		19.23	■□□□□ 0.67
USP19-210	ENST00000465902	PDE11A	Q9HCR9	933 aa		19.23	■□□□□ 0.67
USP19-210	ENST00000465902	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	19.23	■□□□□ 0.67
USP19-210	ENST00000465902	DPP3	Q9NY33	737 aa		19.23	■□□□□ 0.67
USP19-210	ENST00000465902	CGN	Q9P2M7	1197 aa	Known RBP	19.23	■□□□□ 0.67
USP19-210	ENST00000465902	CD207	Q9UJ71	328 aa		19.23	■□□□□ 0.67
USP19-210	ENST00000465902	C2CD2	Q9Y426	696 aa		19.23	■□□□□ 0.67
USP19-210	ENST00000465902	MTCL1	Q9Y4B5	1905 aa	Known RBP	19.22	■□□□□ 0.67
USP19-210	ENST00000465902	TEX28	O15482	410 aa		19.22	■□□□□ 0.67
USP19-210	ENST00000465902	EPCAM	P16422	314 aa		19.22	■□□□□ 0.67
USP19-210	ENST00000465902	TKT	P29401	623 aa	Known RBP	19.22	■□□□□ 0.67
USP19-210	ENST00000465902	LRPAP1	P30533	357 aa		19.22	■□□□□ 0.67
USP19-210	ENST00000465902	CREM	Q03060	361 aa		19.22	■□□□□ 0.67
USP19-210	ENST00000465902	PSMD5	Q16401	504 aa		19.22	■□□□□ 0.67
USP19-210	ENST00000465902	PUS10	Q3MIT2	529 aa	Known RBP	19.22	■□□□□ 0.67
USP19-210	ENST00000465902	PTCRA	Q6ISU1	281 aa	Predicted RBP	19.22	■□□□□ 0.67
USP19-210	ENST00000465902	PALB2	Q86YC2	1186 aa		19.22	■□□□□ 0.67
USP19-210	ENST00000465902	CACTIN	Q8WUQ7	758 aa	Known RBP	19.22	■□□□□ 0.67
USP19-210	ENST00000465902	APOL5	Q9BWW9	433 aa		19.22	■□□□□ 0.67
USP19-210	ENST00000465902	CLEC1B	Q9P126	229 aa		19.22	■□□□□ 0.67
USP19-210	ENST00000465902	EXOC3	O60645	756 aa		19.21	■□□□□ 0.67
USP19-210	ENST00000465902	WNT7B	P56706	349 aa		19.21	■□□□□ 0.67
USP19-210	ENST00000465902	SNRNP35	Q16560	246 aa	Known RBP	19.21	■□□□□ 0.67
USP19-210	ENST00000465902	PDXDC1	Q6P996	788 aa		19.21	■□□□□ 0.67
USP19-210	ENST00000465902	DSTYK	Q6XUX3	929 aa		19.21	■□□□□ 0.67
USP19-210	ENST00000465902	NT5DC4	Q86YG4	428 aa		19.21	■□□□□ 0.67
USP19-210	ENST00000465902	EFCAB13	Q8IY85	973 aa		19.21	■□□□□ 0.67
USP19-210	ENST00000465902	SMYD4	Q8IYR2	804 aa	Predicted RBP	19.21	■□□□□ 0.67
USP19-210	ENST00000465902	GSDMA	Q96QA5	445 aa		19.21	■□□□□ 0.67
USP19-210	ENST00000465902	RXFP1	Q9HBX9	757 aa		19.21	■□□□□ 0.67
USP19-210	ENST00000465902	PCDHA5	Q9Y5H7	936 aa		19.21	■□□□□ 0.67
USP19-210	ENST00000465902	GRXCR2	A6NFK2	248 aa		19.2	■□□□□ 0.66
USP19-210	ENST00000465902	PPEF2	O14830	753 aa		19.2	■□□□□ 0.66
USP19-210	ENST00000465902	CALU	O43852	315 aa	Predicted RBP	19.2	■□□□□ 0.66
USP19-210	ENST00000465902	TMEM191B	P0C7N4	346 aa		19.2	■□□□□ 0.66
USP19-210	ENST00000465902	FGFR3	P22607	806 aa		19.2	■□□□□ 0.66
USP19-210	ENST00000465902	SURF1	Q15526	300 aa		19.2	■□□□□ 0.66
USP19-210	ENST00000465902	C9orf57	Q5W0N0	161 aa		19.2	■□□□□ 0.66
USP19-210	ENST00000465902	ISM2	Q6H9L7	571 aa		19.2	■□□□□ 0.66
USP19-210	ENST00000465902	ANKRD54	Q6NXT1	300 aa		19.2	■□□□□ 0.66
USP19-210	ENST00000465902	TMEM184A	Q6ZMB5	413 aa		19.2	■□□□□ 0.66
USP19-210	ENST00000465902	LNX1	Q8TBB1	728 aa	Predicted RBP	19.2	■□□□□ 0.66
USP19-210	ENST00000465902	SLC22A17	Q8WUG5	538 aa		19.2	■□□□□ 0.66
USP19-210	ENST00000465902	PIK3R5	Q8WYR1	880 aa		19.2	■□□□□ 0.66
USP19-210	ENST00000465902	KCTD10	Q9H3F6	313 aa		19.2	■□□□□ 0.66
USP19-210	ENST00000465902	FNIP2	Q9P278	1114 aa		19.2	■□□□□ 0.66
USP19-210	ENST00000465902	FAM50B	Q9Y247	325 aa		19.2	■□□□□ 0.66
USP19-210	ENST00000465902	R3HCC1	Q9Y3T6	440 aa	Known RBP	19.2	■□□□□ 0.66
USP19-210	ENST00000465902	PDXK	O00764	312 aa		19.19	■□□□□ 0.66
USP19-210	ENST00000465902	GLUD1	P00367	558 aa		19.19	■□□□□ 0.66
USP19-210	ENST00000465902	SPATA31D3	P0C874	917 aa		19.19	■□□□□ 0.66
USP19-210	ENST00000465902	DLAT	P10515	647 aa	Known RBP	19.19	■□□□□ 0.66
USP19-210	ENST00000465902	IL9	P15248	144 aa		19.19	■□□□□ 0.66
USP19-210	ENST00000465902	CLCN4	P51793	760 aa		19.19	■□□□□ 0.66
USP19-210	ENST00000465902	KCNC3	Q14003	757 aa		19.19	■□□□□ 0.66
USP19-210	ENST00000465902	LMBRD2	Q68DH5	695 aa	Predicted RBP	19.19	■□□□□ 0.66
USP19-210	ENST00000465902	SPATA31D4	Q6ZUB0	917 aa		19.19	■□□□□ 0.66
USP19-210	ENST00000465902	ANKS3	Q6ZW76	656 aa		19.19	■□□□□ 0.66
USP19-210	ENST00000465902	C12orf56	Q8IXR9	622 aa		19.19	■□□□□ 0.66
USP19-210	ENST00000465902	GPR65	Q8IYL9	337 aa		19.19	■□□□□ 0.66
USP19-210	ENST00000465902	GUF1	Q8N442	669 aa	Known RBP	19.19	■□□□□ 0.66
USP19-210	ENST00000465902	APPL2	Q8NEU8	664 aa		19.19	■□□□□ 0.66
USP19-210	ENST00000465902	CCDC127	Q96BQ5	260 aa		19.19	■□□□□ 0.66
USP19-210	ENST00000465902	ANKRD36BP1	Q96IX9	119 aa		19.19	■□□□□ 0.66
USP19-210	ENST00000465902	MSLNL	Q96KJ4	702 aa		19.19	■□□□□ 0.66
USP19-210	ENST00000465902	SUSD3	Q96L08	255 aa		19.19	■□□□□ 0.66
USP19-210	ENST00000465902	FBXL18	Q96ME1	805 aa		19.19	■□□□□ 0.66
USP19-210	ENST00000465902	GBP4	Q96PP9	640 aa		19.19	■□□□□ 0.66
USP19-210	ENST00000465902	FNBP1	Q96RU3	617 aa		19.19	■□□□□ 0.66
USP19-210	ENST00000465902	SYN3	O14994	580 aa		19.18	■□□□□ 0.66
USP19-210	ENST00000465902	TNNC2	P02585	160 aa		19.18	■□□□□ 0.66
USP19-210	ENST00000465902	NR3C1	P04150	777 aa		19.18	■□□□□ 0.66
USP19-210	ENST00000465902	ITGB3	P05106	788 aa		19.18	■□□□□ 0.66
USP19-210	ENST00000465902	KRT19	P08727	400 aa		19.18	■□□□□ 0.66
USP19-210	ENST00000465902	HOXB8	P17481	243 aa	Predicted RBP	19.18	■□□□□ 0.66
USP19-210	ENST00000465902	TNNI1	P19237	187 aa		19.18	■□□□□ 0.66
USP19-210	ENST00000465902	SMAD4	Q13485	552 aa	Known RBP	19.18	■□□□□ 0.66
USP19-210	ENST00000465902	VARS2	Q5ST30	1063 aa	Known RBP	19.18	■□□□□ 0.66
USP19-210	ENST00000465902	ZNF658	Q5TYW1	1059 aa	Predicted RBP	19.18	■□□□□ 0.66
USP19-210	ENST00000465902	CEP135	Q66GS9	1140 aa		19.18	■□□□□ 0.66
USP19-210	ENST00000465902	ELMSAN1	Q6PJG2	1045 aa		19.18	■□□□□ 0.66
USP19-210	ENST00000465902	CSGALNACT2	Q8N6G5	542 aa		19.18	■□□□□ 0.66
USP19-210	ENST00000465902	C12orf76	Q8N812	135 aa	Predicted RBP	19.18	■□□□□ 0.66
USP19-210	ENST00000465902	FAM84A	Q96KN4	292 aa		19.18	■□□□□ 0.66
USP19-210	ENST00000465902	CLSTN3	Q9BQT9	956 aa		19.18	■□□□□ 0.66
USP19-210	ENST00000465902	MTMR12	Q9C0I1	747 aa		19.18	■□□□□ 0.66
USP19-210	ENST00000465902	DZANK1	Q9NVP4	752 aa		19.18	■□□□□ 0.66
USP19-210	ENST00000465902	PCDHB8	Q9UN66	801 aa		19.18	■□□□□ 0.66
USP19-210	ENST00000465902	TIMM13	Q9Y5L4	95 aa	Predicted RBP	19.18	■□□□□ 0.66
USP19-210	ENST00000465902	ANO9	A1A5B4	782 aa		19.17	■□□□□ 0.66
USP19-210	ENST00000465902		H7C4K7	107 aa		19.17	■□□□□ 0.66
USP19-210	ENST00000465902	PIR	O00625	290 aa		19.17	■□□□□ 0.66
USP19-210	ENST00000465902	MBTPS2	O43462	519 aa		19.17	■□□□□ 0.66
USP19-210	ENST00000465902	POLR2B	P30876	1174 aa	Known RBP	19.17	■□□□□ 0.66
USP19-210	ENST00000465902	OR1D2	P34982	312 aa		19.17	■□□□□ 0.66
USP19-210	ENST00000465902	ARPP19	P56211	112 aa		19.17	■□□□□ 0.66
USP19-210	ENST00000465902	LILRA4	P59901	499 aa		19.17	■□□□□ 0.66
USP19-210	ENST00000465902	CYP24A1	Q07973	514 aa		19.17	■□□□□ 0.66
USP19-210	ENST00000465902	CAMK4	Q16566	473 aa		19.17	■□□□□ 0.66
USP19-210	ENST00000465902	RARS2	Q5T160	578 aa	Known RBP	19.17	■□□□□ 0.66

Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms