RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 PROSER1Q86XN7 944 aa10.76□□□□□ -0.69
USP39-212ENST00000465514 IFNLR1Q8IU57 520 aaPredicted RBP10.76□□□□□ -0.69
USP39-212ENST00000465514 ASAP3Q8TDY4 903 aa10.76□□□□□ -0.69
USP39-212ENST00000465514 HASPINQ8TF76 798 aa10.76□□□□□ -0.69
USP39-212ENST00000465514 CCDC51Q96ER9 411 aa10.76□□□□□ -0.69
USP39-212ENST00000465514 APOL6Q9BWW8 343 aa10.76□□□□□ -0.69
USP39-212ENST00000465514 TTC12Q9H892 705 aaPredicted RBP10.76□□□□□ -0.69
USP39-212ENST00000465514 ZFP14Q9HCL3 533 aa10.76□□□□□ -0.69
USP39-212ENST00000465514 BRMS1Q9HCU9 246 aa10.76□□□□□ -0.69
USP39-212ENST00000465514 TRPV5Q9NQA5 729 aa10.76□□□□□ -0.69
USP39-212ENST00000465514 ANKEF1Q9NU02 776 aa10.76□□□□□ -0.69
USP39-212ENST00000465514 KLK13Q9UKR3 277 aa10.76□□□□□ -0.69
USP39-212ENST00000465514 APC2O95996 2303 aa10.76□□□□□ -0.69
USP39-212ENST00000465514 SF3B1O75533 1304 aaKnown RBP eCLIP10.76□□□□□ -0.69
USP39-212ENST00000465514 THADAQ6YHU6 1953 aa10.76□□□□□ -0.69
USP39-212ENST00000465514 A0A087WWV3 80 aa10.75□□□□□ -0.69
USP39-212ENST00000465514 LNP1A1A4G5 178 aa10.75□□□□□ -0.69
USP39-212ENST00000465514 BTBD18B2RXH4 712 aa10.75□□□□□ -0.69
USP39-212ENST00000465514 B4GALT5O43286 388 aa10.75□□□□□ -0.69
USP39-212ENST00000465514 TADA2AO75478 443 aa10.75□□□□□ -0.69
USP39-212ENST00000465514 DGAT1O75907 488 aa10.75□□□□□ -0.69
USP39-212ENST00000465514 PSMC3P17980 439 aa10.75□□□□□ -0.69
USP39-212ENST00000465514 ARF4P18085 180 aaPredicted RBP10.75□□□□□ -0.69
USP39-212ENST00000465514 GLRA2P23416 452 aa10.75□□□□□ -0.69
USP39-212ENST00000465514 TXKP42681 527 aa10.75□□□□□ -0.69
USP39-212ENST00000465514 ME3Q16798 604 aa10.75□□□□□ -0.69
USP39-212ENST00000465514 CEP57Q86XR8 500 aa10.75□□□□□ -0.69
USP39-212ENST00000465514 LNX1Q8TBB1 728 aaPredicted RBP10.75□□□□□ -0.69
USP39-212ENST00000465514 ADAM32Q8TC27 787 aa10.75□□□□□ -0.69
USP39-212ENST00000465514 PIGOQ8TEQ8 1089 aa10.75□□□□□ -0.69
USP39-212ENST00000465514 PIK3R5Q8WYR1 880 aa10.75□□□□□ -0.69
USP39-212ENST00000465514 TTPALQ9BTX7 342 aa10.75□□□□□ -0.69
USP39-212ENST00000465514 TRIM6Q9C030 488 aaPredicted RBP10.75□□□□□ -0.69
USP39-212ENST00000465514 NXF3Q9H4D5 531 aaKnown RBP10.75□□□□□ -0.69
USP39-212ENST00000465514 GIT1Q9Y2X7 761 aa10.75□□□□□ -0.69
USP39-212ENST00000465514 MSRB2Q9Y3D2 182 aa10.75□□□□□ -0.69
USP39-212ENST00000465514 NCANO14594 1321 aa10.75□□□□□ -0.69
USP39-212ENST00000465514 ABCA7Q8IZY2 2146 aa10.75□□□□□ -0.69
USP39-212ENST00000465514 EIF4E1BA6NMX2 242 aaKnown RBP10.74□□□□□ -0.69
USP39-212ENST00000465514 WNT7AO00755 349 aa10.74□□□□□ -0.69
USP39-212ENST00000465514 EXTL3O43909 919 aa10.74□□□□□ -0.69
USP39-212ENST00000465514 NEMFO60524 1076 aa10.74□□□□□ -0.69
USP39-212ENST00000465514 LARGE1O95461 756 aa10.74□□□□□ -0.69
USP39-212ENST00000465514 NPTXRO95502 500 aa10.74□□□□□ -0.69
USP39-212ENST00000465514 CSRP1P21291 193 aaKnown RBP10.74□□□□□ -0.69
USP39-212ENST00000465514 AKAP5P24588 427 aa10.74□□□□□ -0.69
USP39-212ENST00000465514 SOX9P48436 509 aa10.74□□□□□ -0.69
USP39-212ENST00000465514 RARRES1P49788 294 aa10.74□□□□□ -0.69
USP39-212ENST00000465514 FOSBP53539 338 aa10.74□□□□□ -0.69
USP39-212ENST00000465514 ANAPC15P60006 121 aa10.74□□□□□ -0.69
USP39-212ENST00000465514 UVSSAQ2YD98 709 aa10.74□□□□□ -0.69
USP39-212ENST00000465514 FAM171A1Q5VUB5 890 aa10.74□□□□□ -0.69
USP39-212ENST00000465514 CDR2LQ86X02 465 aaPredicted RBP10.74□□□□□ -0.69
USP39-212ENST00000465514 HACE1Q8IYU2 909 aa10.74□□□□□ -0.69
USP39-212ENST00000465514 GSTCDQ8NEC7 633 aa10.74□□□□□ -0.69
USP39-212ENST00000465514 DEFB124Q8NES8 71 aa10.74□□□□□ -0.69
USP39-212ENST00000465514 GTF3C6Q969F1 213 aa10.74□□□□□ -0.69
USP39-212ENST00000465514 TCEAL4Q96EI5 215 aa10.74□□□□□ -0.69
USP39-212ENST00000465514 CCDC43Q96MW1 224 aaKnown RBP10.74□□□□□ -0.69
USP39-212ENST00000465514 ASB16Q96NS5 453 aa10.74□□□□□ -0.69
USP39-212ENST00000465514 MTMR9Q96QG7 549 aa10.74□□□□□ -0.69
USP39-212ENST00000465514 PAAF1Q9BRP4 392 aa10.74□□□□□ -0.69
USP39-212ENST00000465514 NFKBIZQ9BYH8 718 aa10.74□□□□□ -0.69
USP39-212ENST00000465514 POLR3FQ9H1D9 316 aaPredicted RBP10.74□□□□□ -0.69
USP39-212ENST00000465514 KLK14Q9P0G3 267 aa10.74□□□□□ -0.69
USP39-212ENST00000465514 TRIP11Q15643 1979 aa10.74□□□□□ -0.69
USP39-212ENST00000465514 SHROOM3Q8TF72 1996 aa10.74□□□□□ -0.69
USP39-212ENST00000465514 ASXL3Q9C0F0 2248 aa10.73□□□□□ -0.69
USP39-212ENST00000465514 NUP210Q8TEM1 1887 aaPredicted RBP10.73□□□□□ -0.69
USP39-212ENST00000465514 A0A1B0GUA9 196 aa10.73□□□□□ -0.69
USP39-212ENST00000465514 SLC38A8A6NNN8 435 aa10.73□□□□□ -0.69
USP39-212ENST00000465514 ARNTLO00327 626 aa10.73□□□□□ -0.69
USP39-212ENST00000465514 ZNF263O14978 683 aa10.73□□□□□ -0.69
USP39-212ENST00000465514 JAK2O60674 1132 aa10.73□□□□□ -0.69
USP39-212ENST00000465514 USO1O60763 962 aaKnown RBP10.73□□□□□ -0.69
USP39-212ENST00000465514 XRCC6P12956 609 aaKnown RBP eCLIP10.73□□□□□ -0.69
USP39-212ENST00000465514 VIPR2P41587 438 aa10.73□□□□□ -0.69
USP39-212ENST00000465514 CREB5Q02930 508 aa10.73□□□□□ -0.69
USP39-212ENST00000465514 HSP90AA2PQ14568 343 aaPredicted RBP10.73□□□□□ -0.69
USP39-212ENST00000465514 PRSS36Q5K4E3 855 aa10.73□□□□□ -0.69
USP39-212ENST00000465514 DGKKQ5KSL6 1271 aa10.73□□□□□ -0.69
USP39-212ENST00000465514 SLC27A1Q6PCB7 646 aa10.73□□□□□ -0.69
USP39-212ENST00000465514 TXNDC11Q6PKC3 985 aa10.73□□□□□ -0.69
USP39-212ENST00000465514 MAEAQ7L5Y9 396 aa10.73□□□□□ -0.69
USP39-212ENST00000465514 DIS3L2Q8IYB7 885 aaKnown RBP10.73□□□□□ -0.69
USP39-212ENST00000465514 NSUN7Q8NE18 718 aaKnown RBP10.73□□□□□ -0.69
USP39-212ENST00000465514 ZC3H10Q96K80 434 aaKnown RBP10.73□□□□□ -0.69
USP39-212ENST00000465514 PHF12Q96QT6 1004 aa10.73□□□□□ -0.69
USP39-212ENST00000465514 GPRC5CQ9NQ84 441 aa10.73□□□□□ -0.69
USP39-212ENST00000465514 AVENQ9NQS1 362 aaPredicted RBP10.73□□□□□ -0.69
USP39-212ENST00000465514 PARP2Q9UGN5 583 aa10.73□□□□□ -0.69
USP39-212ENST00000465514 UNC79Q9P2D8 2635 aa10.73□□□□□ -0.69
USP39-212ENST00000465514 CFAP46Q8IYW2 2715 aa10.73□□□□□ -0.69
USP39-212ENST00000465514 PI4KAP42356 2102 aa10.73□□□□□ -0.69
USP39-212ENST00000465514 KIAA1549LQ6ZVL6 1849 aa10.72□□□□□ -0.69
USP39-212ENST00000465514 MYO16Q9Y6X6 1858 aa10.72□□□□□ -0.69
USP39-212ENST00000465514 WDR27A2RRH5 827 aa10.72□□□□□ -0.69
USP39-212ENST00000465514 LRRIQ4A6NIV6 560 aa10.72□□□□□ -0.69
USP39-212ENST00000465514 KIF4AO95239 1232 aa10.72□□□□□ -0.69
USP39-212ENST00000465514 SEC24BO95487 1268 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms