RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 GOLGA8RI6L899 631 aa13.36□□□□□ -0.27
CLCNKA-204ENST00000464764 KIF3CO14782 793 aa13.36□□□□□ -0.27
CLCNKA-204ENST00000464764 LIN7AO14910 233 aaPredicted RBP13.36□□□□□ -0.27
CLCNKA-204ENST00000464764 TCF4P15884 667 aa13.36□□□□□ -0.27
CLCNKA-204ENST00000464764 RBM5P52756 815 aaKnown RBP eCLIP13.36□□□□□ -0.27
CLCNKA-204ENST00000464764 SPARCL1Q14515 664 aa13.36□□□□□ -0.27
CLCNKA-204ENST00000464764 MAPK6Q16659 721 aa13.36□□□□□ -0.27
CLCNKA-204ENST00000464764 CCDC125Q86Z20 511 aa13.36□□□□□ -0.27
CLCNKA-204ENST00000464764 PASD1Q8IV76 773 aa13.36□□□□□ -0.27
CLCNKA-204ENST00000464764 RFWD2Q8NHY2 731 aa13.36□□□□□ -0.27
CLCNKA-204ENST00000464764 DTX3LQ8TDB6 740 aa13.36□□□□□ -0.27
CLCNKA-204ENST00000464764 DNAJC9Q8WXX5 260 aa13.36□□□□□ -0.27
CLCNKA-204ENST00000464764 HAUS1Q96CS2 278 aa13.36□□□□□ -0.27
CLCNKA-204ENST00000464764 CCDC17Q96LX7 622 aa13.36□□□□□ -0.27
CLCNKA-204ENST00000464764 VPS37BQ9H9H4 285 aa13.36□□□□□ -0.27
CLCNKA-204ENST00000464764 STK24Q9Y6E0 443 aa13.36□□□□□ -0.27
CLCNKA-204ENST00000464764 TAF1LQ8IZX4 1826 aa13.35□□□□□ -0.27
CLCNKA-204ENST00000464764 C2orf71A6NGG8 1288 aa13.35□□□□□ -0.27
CLCNKA-204ENST00000464764 LGR5O75473 907 aa13.35□□□□□ -0.27
CLCNKA-204ENST00000464764 PLS3P13797 630 aa13.35□□□□□ -0.27
CLCNKA-204ENST00000464764 ADSSP30520 456 aa13.35□□□□□ -0.27
CLCNKA-204ENST00000464764 ECE1P42892 770 aa13.35□□□□□ -0.27
CLCNKA-204ENST00000464764 PSMC4P43686 418 aa13.35□□□□□ -0.27
CLCNKA-204ENST00000464764 MFAP3P55082 362 aa13.35□□□□□ -0.27
CLCNKA-204ENST00000464764 GAD2Q05329 585 aa13.35□□□□□ -0.27
CLCNKA-204ENST00000464764 EFTUD2Q15029 972 aaKnown RBP eCLIP13.35□□□□□ -0.27
CLCNKA-204ENST00000464764 NLRP9Q7RTR0 991 aa13.35□□□□□ -0.27
CLCNKA-204ENST00000464764 NRG4Q8WWG1 115 aa13.35□□□□□ -0.27
CLCNKA-204ENST00000464764 NMRK1Q9NWW6 199 aa13.35□□□□□ -0.27
CLCNKA-204ENST00000464764 ZFP69BQ9UJL9 534 aa13.35□□□□□ -0.27
CLCNKA-204ENST00000464764 SUGT1Q9Y2Z0 365 aa13.35□□□□□ -0.27
CLCNKA-204ENST00000464764 GH2P01242 217 aa13.35□□□□□ -0.27
CLCNKA-204ENST00000464764 PEX3P56589 373 aa13.35□□□□□ -0.27
CLCNKA-204ENST00000464764 KLF1Q13351 362 aaPredicted RBP13.35□□□□□ -0.27
CLCNKA-204ENST00000464764 MUM1Q2TAK8 710 aa13.35□□□□□ -0.27
CLCNKA-204ENST00000464764 CEP55Q53EZ4 464 aa13.35□□□□□ -0.27
CLCNKA-204ENST00000464764 LMBRD2Q68DH5 695 aaPredicted RBP13.35□□□□□ -0.27
CLCNKA-204ENST00000464764 LVRNQ6Q4G3 990 aa13.35□□□□□ -0.27
CLCNKA-204ENST00000464764 HAUS6Q7Z4H7 955 aa13.35□□□□□ -0.27
CLCNKA-204ENST00000464764 ANKMY2Q8IV38 441 aa13.35□□□□□ -0.27
CLCNKA-204ENST00000464764 RNF217Q8TC41 542 aa13.35□□□□□ -0.27
CLCNKA-204ENST00000464764 ACSF2Q96CM8 615 aaPredicted RBP13.35□□□□□ -0.27
CLCNKA-204ENST00000464764 TSC22D3Q99576 134 aa13.35□□□□□ -0.27
CLCNKA-204ENST00000464764 SH3GL3Q99963 347 aa13.35□□□□□ -0.27
CLCNKA-204ENST00000464764 PLVAPQ9BX97 442 aa13.35□□□□□ -0.27
CLCNKA-204ENST00000464764 C10orf88Q9H8K7 445 aa13.35□□□□□ -0.27
CLCNKA-204ENST00000464764 KANSL3Q9P2N6 904 aa13.35□□□□□ -0.27
CLCNKA-204ENST00000464764 CFAP69A5D8W1 941 aa13.34□□□□□ -0.27
CLCNKA-204ENST00000464764 MAGEB2O15479 319 aa13.34□□□□□ -0.27
CLCNKA-204ENST00000464764 KRT36O76013 467 aa13.34□□□□□ -0.27
CLCNKA-204ENST00000464764 PECAM1P16284 738 aaPredicted RBP13.34□□□□□ -0.27
CLCNKA-204ENST00000464764 CLEC16AQ2KHT3 1053 aa13.34□□□□□ -0.27
CLCNKA-204ENST00000464764 TEKT4Q8WW24 435 aa13.34□□□□□ -0.27
CLCNKA-204ENST00000464764 ZNF75CPQ92670 426 aaPredicted RBP13.34□□□□□ -0.27
CLCNKA-204ENST00000464764 MOV10L1Q9BXT6 1211 aaKnown RBP13.34□□□□□ -0.27
CLCNKA-204ENST00000464764 CADM1Q9BY67 442 aaKnown RBP13.34□□□□□ -0.27
CLCNKA-204ENST00000464764 DNPEPQ9ULA0 475 aa13.34□□□□□ -0.27
CLCNKA-204ENST00000464764 C10orf71Q711Q0 1435 aa13.34□□□□□ -0.27
CLCNKA-204ENST00000464764 LRRD1A4D1F6 860 aa13.34□□□□□ -0.27
CLCNKA-204ENST00000464764 IPO5O00410 1097 aaKnown RBP13.34□□□□□ -0.27
CLCNKA-204ENST00000464764 ADRA1DP25100 572 aa13.34□□□□□ -0.27
CLCNKA-204ENST00000464764 ALDH3A1P30838 453 aa13.34□□□□□ -0.27
CLCNKA-204ENST00000464764 PIK3CAP42336 1068 aa13.34□□□□□ -0.27
CLCNKA-204ENST00000464764 SNRNP35Q16560 246 aaKnown RBP13.34□□□□□ -0.27
CLCNKA-204ENST00000464764 PDK4Q16654 411 aa13.34□□□□□ -0.27
CLCNKA-204ENST00000464764 ZFYVE27Q5T4F4 411 aa13.34□□□□□ -0.27
CLCNKA-204ENST00000464764 HHATQ5VTY9 493 aa13.34□□□□□ -0.27
CLCNKA-204ENST00000464764 LMNTD2Q8IXW0 634 aa13.34□□□□□ -0.27
CLCNKA-204ENST00000464764 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.34□□□□□ -0.27
CLCNKA-204ENST00000464764 MCOLN2Q8IZK6 566 aa13.34□□□□□ -0.27
CLCNKA-204ENST00000464764 TEX9Q8N6V9 391 aa13.34□□□□□ -0.27
CLCNKA-204ENST00000464764 GRK7Q8WTQ7 553 aa13.34□□□□□ -0.27
CLCNKA-204ENST00000464764 TEKT1Q969V4 418 aa13.34□□□□□ -0.27
CLCNKA-204ENST00000464764 RBM17Q96I25 401 aaKnown RBP13.34□□□□□ -0.27
CLCNKA-204ENST00000464764 ACCSQ96QU6 501 aa13.34□□□□□ -0.27
CLCNKA-204ENST00000464764 SMC6Q96SB8 1091 aa13.34□□□□□ -0.27
CLCNKA-204ENST00000464764 OSBPL8Q9BZF1 889 aa13.34□□□□□ -0.27
CLCNKA-204ENST00000464764 PAPOLBQ9NRJ5 636 aaKnown RBP13.34□□□□□ -0.27
CLCNKA-204ENST00000464764 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.34□□□□□ -0.27
CLCNKA-204ENST00000464764 FAM198AQ9UFP1 575 aa13.34□□□□□ -0.27
CLCNKA-204ENST00000464764 USP20Q9Y2K6 914 aa13.34□□□□□ -0.27
CLCNKA-204ENST00000464764 COL16A1Q07092 1604 aaPredicted RBP13.34□□□□□ -0.27
CLCNKA-204ENST00000464764 UBE4BO95155 1302 aa13.34□□□□□ -0.27
CLCNKA-204ENST00000464764 A0A0G2JND7 137 aa13.33□□□□□ -0.27
CLCNKA-204ENST00000464764 KRT4P19013 534 aa13.33□□□□□ -0.27
CLCNKA-204ENST00000464764 KLRC2P26717 231 aa13.33□□□□□ -0.27
CLCNKA-204ENST00000464764 SOX10P56693 466 aa13.33□□□□□ -0.27
CLCNKA-204ENST00000464764 AP1ARQ63HQ0 302 aa13.33□□□□□ -0.27
CLCNKA-204ENST00000464764 SLC30A9Q6PML9 568 aa13.33□□□□□ -0.27
CLCNKA-204ENST00000464764 ZBED8Q8IZ13 594 aa13.33□□□□□ -0.27
CLCNKA-204ENST00000464764 ENDOVQ8N8Q3 282 aaKnown RBP13.33□□□□□ -0.27
CLCNKA-204ENST00000464764 CCDC89Q8N998 374 aa13.33□□□□□ -0.27
CLCNKA-204ENST00000464764 INPP5DQ92835 1189 aa13.33□□□□□ -0.27
CLCNKA-204ENST00000464764 PPP1R12CQ9BZL4 782 aa13.33□□□□□ -0.27
CLCNKA-204ENST00000464764 ARL8BQ9NVJ2 186 aa13.33□□□□□ -0.27
CLCNKA-204ENST00000464764 LARSQ9P2J5 1176 aaKnown RBP13.33□□□□□ -0.27
CLCNKA-204ENST00000464764 DCTN3O75935 186 aa13.33□□□□□ -0.28
CLCNKA-204ENST00000464764 ATP5HO75947 161 aa13.33□□□□□ -0.28
CLCNKA-204ENST00000464764 SERPINB2P05120 415 aa13.33□□□□□ -0.28
CLCNKA-204ENST00000464764 SP100P23497 879 aaPredicted RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms