RNA–Protein interactions for RNA: ENST00000463013.1

KDM3A-208, Transcript of lysine demethylase 3A, human

TSL 3

Gene KDM3A, Length 577 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KDM3A-208	ENST00000463013	KHDC1	Q4VXA5	237 aa	Known RBP	4.88	□□□□□ -1.63
KDM3A-208	ENST00000463013	MAPKAPK5	Q8IW41	473 aa		4.88	□□□□□ -1.63
KDM3A-208	ENST00000463013	ANKRD13A	Q8IZ07	590 aa		4.88	□□□□□ -1.63
KDM3A-208	ENST00000463013	C3orf20	Q8ND61	904 aa		4.88	□□□□□ -1.63
KDM3A-208	ENST00000463013	CPEB3	Q8NE35	698 aa	Known RBP	4.88	□□□□□ -1.63
KDM3A-208	ENST00000463013	TBC1D15	Q8TC07	691 aa		4.88	□□□□□ -1.63
KDM3A-208	ENST00000463013	NUP133	Q8WUM0	1156 aa		4.88	□□□□□ -1.63
KDM3A-208	ENST00000463013	CAMKK2	Q96RR4	588 aa		4.88	□□□□□ -1.63
KDM3A-208	ENST00000463013	VRK1	Q99986	396 aa	Predicted RBP	4.88	□□□□□ -1.63
KDM3A-208	ENST00000463013	ZSWIM1	Q9BR11	485 aa		4.88	□□□□□ -1.63
KDM3A-208	ENST00000463013	PACSIN1	Q9BY11	444 aa		4.88	□□□□□ -1.63
KDM3A-208	ENST00000463013	RTFDC1	Q9BY42	306 aa	Predicted RBP	4.88	□□□□□ -1.63
KDM3A-208	ENST00000463013	GTPBP4	Q9BZE4	634 aa	Known RBP	4.88	□□□□□ -1.63
KDM3A-208	ENST00000463013	ZNF180	Q9UJW8	692 aa		4.88	□□□□□ -1.63
KDM3A-208	ENST00000463013	POLH	Q9Y253	713 aa		4.88	□□□□□ -1.63
KDM3A-208	ENST00000463013	LRRC14B	A6NHZ5	514 aa		4.87	□□□□□ -1.63
KDM3A-208	ENST00000463013	SLC16A6	O15403	523 aa		4.87	□□□□□ -1.63
KDM3A-208	ENST00000463013	LPXN	O60711	386 aa		4.87	□□□□□ -1.63
KDM3A-208	ENST00000463013	SLC43A1	O75387	559 aa		4.87	□□□□□ -1.63
KDM3A-208	ENST00000463013	ARIH2	O95376	493 aa		4.87	□□□□□ -1.63
KDM3A-208	ENST00000463013	ELANE	P08246	267 aa		4.87	□□□□□ -1.63
KDM3A-208	ENST00000463013	BMP5	P22003	454 aa		4.87	□□□□□ -1.63
KDM3A-208	ENST00000463013	FGFR4	P22455	802 aa		4.87	□□□□□ -1.63
KDM3A-208	ENST00000463013	DDX6	P26196	483 aa	Known RBP eCLIP	4.87	□□□□□ -1.63
KDM3A-208	ENST00000463013	NOMO3	P69849	1222 aa		4.87	□□□□□ -1.63
KDM3A-208	ENST00000463013	MXRA7	P84157	204 aa		4.87	□□□□□ -1.63
KDM3A-208	ENST00000463013	SNAPC2	Q13487	334 aa		4.87	□□□□□ -1.63
KDM3A-208	ENST00000463013	PTPA	Q15257	358 aa		4.87	□□□□□ -1.63
KDM3A-208	ENST00000463013	PGS1	Q32NB8	556 aa		4.87	□□□□□ -1.63
KDM3A-208	ENST00000463013	NOMO2	Q5JPE7	1267 aa		4.87	□□□□□ -1.63
KDM3A-208	ENST00000463013	ARMC6	Q6NXE6	501 aa		4.87	□□□□□ -1.63
KDM3A-208	ENST00000463013	SLC4A10	Q6U841	1118 aa		4.87	□□□□□ -1.63
KDM3A-208	ENST00000463013	ZNF627	Q7L945	461 aa		4.87	□□□□□ -1.63
KDM3A-208	ENST00000463013	ARHGEF19	Q8IW93	802 aa		4.87	□□□□□ -1.63
KDM3A-208	ENST00000463013	ULK2	Q8IYT8	1036 aa		4.87	□□□□□ -1.63
KDM3A-208	ENST00000463013	TMEM132C	Q8N3T6	1108 aa		4.87	□□□□□ -1.63
KDM3A-208	ENST00000463013	JPH3	Q8WXH2	748 aa	Predicted RBP	4.87	□□□□□ -1.63
KDM3A-208	ENST00000463013	RGMA	Q96B86	450 aa		4.87	□□□□□ -1.63
KDM3A-208	ENST00000463013	ADAM2	Q99965	735 aa		4.87	□□□□□ -1.63
KDM3A-208	ENST00000463013	CDH19	Q9H159	772 aa		4.87	□□□□□ -1.63
KDM3A-208	ENST00000463013	JKAMP	Q9P055	326 aa		4.87	□□□□□ -1.63
KDM3A-208	ENST00000463013	PNMA8B	Q9ULN7	279 aa	Predicted RBP	4.87	□□□□□ -1.63
KDM3A-208	ENST00000463013	MAP3K2	Q9Y2U5	619 aa		4.87	□□□□□ -1.63
KDM3A-208	ENST00000463013	THRAP3	Q9Y2W1	955 aa	Known RBP	4.87	□□□□□ -1.63
KDM3A-208	ENST00000463013	CCDC78	A2IDD5	438 aa		4.86	□□□□□ -1.63
KDM3A-208	ENST00000463013	NT5C1B-RDH14	C9J2C7	533 aa		4.86	□□□□□ -1.63
KDM3A-208	ENST00000463013	F2RL2	O00254	374 aa		4.86	□□□□□ -1.63
KDM3A-208	ENST00000463013	AGFG2	O95081	481 aa		4.86	□□□□□ -1.63
KDM3A-208	ENST00000463013	S100B	P04271	92 aa	Predicted RBP	4.86	□□□□□ -1.63
KDM3A-208	ENST00000463013	HK3	P52790	923 aa		4.86	□□□□□ -1.63
KDM3A-208	ENST00000463013	HSD11B2	P80365	405 aa		4.86	□□□□□ -1.63
KDM3A-208	ENST00000463013	MRPS21	P82921	87 aa	Known RBP	4.86	□□□□□ -1.63
KDM3A-208	ENST00000463013	GUCY1B3	Q02153	619 aa		4.86	□□□□□ -1.63
KDM3A-208	ENST00000463013	SLFN5	Q08AF3	891 aa		4.86	□□□□□ -1.63
KDM3A-208	ENST00000463013	REST	Q13127	1097 aa		4.86	□□□□□ -1.63
KDM3A-208	ENST00000463013	NOG	Q13253	232 aa		4.86	□□□□□ -1.63
KDM3A-208	ENST00000463013	SPDYE7P	Q495Y7	208 aa		4.86	□□□□□ -1.63
KDM3A-208	ENST00000463013	FLYWCH1	Q4VC44	716 aa		4.86	□□□□□ -1.63
KDM3A-208	ENST00000463013	UTP14C	Q5TAP6	766 aa	Known RBP	4.86	□□□□□ -1.63
KDM3A-208	ENST00000463013	B3GNTL1	Q67FW5	361 aa	Predicted RBP	4.86	□□□□□ -1.63
KDM3A-208	ENST00000463013	ZNF365	Q70YC5	407 aa		4.86	□□□□□ -1.63
KDM3A-208	ENST00000463013	HPS3	Q969F9	1004 aa		4.86	□□□□□ -1.63
KDM3A-208	ENST00000463013	MVB12A	Q96EY5	273 aa		4.86	□□□□□ -1.63
KDM3A-208	ENST00000463013	MARS2	Q96GW9	593 aa	Known RBP	4.86	□□□□□ -1.63
KDM3A-208	ENST00000463013	PNKP	Q96T60	521 aa		4.86	□□□□□ -1.63
KDM3A-208	ENST00000463013	SIDT1	Q9NXL6	827 aa	Known RBP	4.86	□□□□□ -1.63
KDM3A-208	ENST00000463013	ZIM2	Q9NZV7	527 aa		4.86	□□□□□ -1.63
KDM3A-208	ENST00000463013	USP25	Q9UHP3	1055 aa		4.86	□□□□□ -1.63
KDM3A-208	ENST00000463013	KCNE5	Q9UJ90	142 aa		4.86	□□□□□ -1.63
KDM3A-208	ENST00000463013	AATK	Q6ZMQ8	1374 aa		4.86	□□□□□ -1.63
KDM3A-208	ENST00000463013	UNC119B	A6NIH7	251 aa		4.85	□□□□□ -1.63
KDM3A-208	ENST00000463013	OFD1	O75665	1012 aa		4.85	□□□□□ -1.63
KDM3A-208	ENST00000463013	CDKL5	O76039	1030 aa		4.85	□□□□□ -1.63
KDM3A-208	ENST00000463013	GPANK1	O95872	356 aa		4.85	□□□□□ -1.63
KDM3A-208	ENST00000463013	FTL	P02792	175 aa	Predicted RBP	4.85	□□□□□ -1.63
KDM3A-208	ENST00000463013	FTH1P19	P0C7X4	201 aa		4.85	□□□□□ -1.63
KDM3A-208	ENST00000463013	FCER1A	P12319	257 aa		4.85	□□□□□ -1.63
KDM3A-208	ENST00000463013	SMARCA1	P28370	1054 aa		4.85	□□□□□ -1.63
KDM3A-208	ENST00000463013	CYP2C19	P33261	490 aa		4.85	□□□□□ -1.63
KDM3A-208	ENST00000463013	CXADR	P78310	365 aa		4.85	□□□□□ -1.63
KDM3A-208	ENST00000463013	ATAT1	Q5SQI0	421 aa		4.85	□□□□□ -1.63
KDM3A-208	ENST00000463013	IFIT1B	Q5T764	474 aa	Known RBP	4.85	□□□□□ -1.63
KDM3A-208	ENST00000463013	FOXR2	Q6PJQ5	311 aa		4.85	□□□□□ -1.63
KDM3A-208	ENST00000463013		Q6ZPA2	131 aa		4.85	□□□□□ -1.63
KDM3A-208	ENST00000463013	FAM43A	Q8N2R8	423 aa		4.85	□□□□□ -1.63
KDM3A-208	ENST00000463013	AIFM3	Q96NN9	605 aa		4.85	□□□□□ -1.63
KDM3A-208	ENST00000463013	MED15	Q96RN5	788 aa		4.85	□□□□□ -1.63
KDM3A-208	ENST00000463013	MAP3K14	Q99558	947 aa		4.85	□□□□□ -1.63
KDM3A-208	ENST00000463013	TTPAL	Q9BTX7	342 aa		4.85	□□□□□ -1.63
KDM3A-208	ENST00000463013	SLC12A5	Q9H2X9	1139 aa		4.85	□□□□□ -1.63
KDM3A-208	ENST00000463013	SERHL2	Q9H4I8	314 aa		4.85	□□□□□ -1.63
KDM3A-208	ENST00000463013	KMT5A	Q9NQR1	393 aa		4.85	□□□□□ -1.63
KDM3A-208	ENST00000463013	GNL3L	Q9NVN8	582 aa	Known RBP	4.85	□□□□□ -1.63
KDM3A-208	ENST00000463013	RNF181	Q9P0P0	153 aa		4.85	□□□□□ -1.63
KDM3A-208	ENST00000463013	ANKFY1	Q9P2R3	1169 aa		4.85	□□□□□ -1.63
KDM3A-208	ENST00000463013	HSFX1	Q9UBD0	423 aa		4.85	□□□□□ -1.63
KDM3A-208	ENST00000463013	PCDHA3	Q9Y5H8	950 aa		4.85	□□□□□ -1.63
KDM3A-208	ENST00000463013	NOX1	Q9Y5S8	564 aa		4.85	□□□□□ -1.63
KDM3A-208	ENST00000463013	RFPL1	O75677	317 aa		4.84	□□□□□ -1.63
KDM3A-208	ENST00000463013	SPDEF	O95238	335 aa		4.84	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms