RNA–Protein interactions for RNA: ENST00000463004.5

RBM39-223, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 4,580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-223ENST00000463004 TNFSF13BQ9Y275 285 aa12.45□□□□□ -0.42
RBM39-223ENST00000463004 GLI3P10071 1580 aa12.45□□□□□ -0.42
RBM39-223ENST00000463004 SYNJ2BP-COX16A0A087WUM0 186 aa12.45□□□□□ -0.42
RBM39-223ENST00000463004 ATP1A1P05023 1023 aaKnown RBP12.45□□□□□ -0.42
RBM39-223ENST00000463004 PRKCIP41743 596 aa12.45□□□□□ -0.42
RBM39-223ENST00000463004 CLCN6P51797 869 aa12.45□□□□□ -0.42
RBM39-223ENST00000463004 BOLA3Q53S33 107 aa12.45□□□□□ -0.42
RBM39-223ENST00000463004 ZNF662Q6ZS27 426 aa12.45□□□□□ -0.42
RBM39-223ENST00000463004 CCDC60Q8IWA6 550 aaPredicted RBP12.45□□□□□ -0.42
RBM39-223ENST00000463004 REXO1L1PQ8IX06 675 aa12.45□□□□□ -0.42
RBM39-223ENST00000463004 C10orf67Q8IYJ2 551 aa12.45□□□□□ -0.42
RBM39-223ENST00000463004 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.45□□□□□ -0.42
RBM39-223ENST00000463004 CCDC68Q9H2F9 335 aa12.45□□□□□ -0.42
RBM39-223ENST00000463004 COX16Q9P0S2 106 aa12.45□□□□□ -0.42
RBM39-223ENST00000463004 SEPT10Q9P0V9 454 aa12.45□□□□□ -0.42
RBM39-223ENST00000463004 CES2O00748 559 aa12.44□□□□□ -0.42
RBM39-223ENST00000463004 PSTPIP1O43586 416 aa12.44□□□□□ -0.42
RBM39-223ENST00000463004 MX2P20592 715 aa12.44□□□□□ -0.42
RBM39-223ENST00000463004 BTBD8Q5XKL5 378 aa12.44□□□□□ -0.42
RBM39-223ENST00000463004 GPR142Q7Z601 462 aa12.44□□□□□ -0.42
RBM39-223ENST00000463004 MMGT1Q8N4V1 131 aa12.44□□□□□ -0.42
RBM39-223ENST00000463004 WDR24Q96S15 920 aa12.44□□□□□ -0.42
RBM39-223ENST00000463004 KIFC3Q9BVG8 833 aa12.44□□□□□ -0.42
RBM39-223ENST00000463004 AP1M1Q9BXS5 423 aa12.44□□□□□ -0.42
RBM39-223ENST00000463004 TTLL3Q9Y4R7 772 aa12.44□□□□□ -0.42
RBM39-223ENST00000463004 PPP1R12AO14974 1030 aaPredicted RBP12.44□□□□□ -0.42
RBM39-223ENST00000463004 PAEPP09466 180 aa12.44□□□□□ -0.42
RBM39-223ENST00000463004 GNL1P36915 607 aaPredicted RBP12.44□□□□□ -0.42
RBM39-223ENST00000463004 MSH2P43246 934 aa12.44□□□□□ -0.42
RBM39-223ENST00000463004 LHX1P48742 406 aa12.44□□□□□ -0.42
RBM39-223ENST00000463004 IL9RQ01113 521 aa12.44□□□□□ -0.42
RBM39-223ENST00000463004 SNX1Q13596 522 aa12.44□□□□□ -0.42
RBM39-223ENST00000463004 LRRC55Q6ZSA7 311 aa12.44□□□□□ -0.42
RBM39-223ENST00000463004 KSR1Q8IVT5 923 aa12.44□□□□□ -0.42
RBM39-223ENST00000463004 CCDC110Q8TBZ0 833 aa12.44□□□□□ -0.42
RBM39-223ENST00000463004 CCT6BQ92526 530 aa12.44□□□□□ -0.42
RBM39-223ENST00000463004 ZNF668Q96K58 619 aaPredicted RBP12.44□□□□□ -0.42
RBM39-223ENST00000463004 RSAD1Q9HA92 442 aa12.44□□□□□ -0.42
RBM39-223ENST00000463004 SNCAIPQ9Y6H5 919 aa12.44□□□□□ -0.42
RBM39-223ENST00000463004 DCDC2CA8MYV0 355 aa12.44□□□□□ -0.42
RBM39-223ENST00000463004 TADA2AO75478 443 aa12.44□□□□□ -0.42
RBM39-223ENST00000463004 BASP1P80723 227 aaKnown RBP12.44□□□□□ -0.42
RBM39-223ENST00000463004 C1QBPQ07021 282 aaKnown RBP12.44□□□□□ -0.42
RBM39-223ENST00000463004 NPY5RQ15761 445 aa12.44□□□□□ -0.42
RBM39-223ENST00000463004 SCN4BQ8IWT1 228 aa12.44□□□□□ -0.42
RBM39-223ENST00000463004 HSPH1Q92598 858 aa12.44□□□□□ -0.42
RBM39-223ENST00000463004 SEPT8Q92599 483 aa12.44□□□□□ -0.42
RBM39-223ENST00000463004 VIPAS39Q9H9C1 493 aa12.44□□□□□ -0.42
RBM39-223ENST00000463004 L2HGDHQ9H9P8 463 aa12.44□□□□□ -0.42
RBM39-223ENST00000463004 MAD1L1Q9Y6D9 718 aa12.44□□□□□ -0.42
RBM39-223ENST00000463004 A0A087WZ62 844 aa12.44□□□□□ -0.42
RBM39-223ENST00000463004 H7C4K7 107 aa12.44□□□□□ -0.42
RBM39-223ENST00000463004 FOXN3O00409 490 aaPredicted RBP12.44□□□□□ -0.42
RBM39-223ENST00000463004 MTSS1O43312 755 aa12.44□□□□□ -0.42
RBM39-223ENST00000463004 PHF2O75151 1096 aa12.44□□□□□ -0.42
RBM39-223ENST00000463004 FBXO21O94952 628 aa12.44□□□□□ -0.42
RBM39-223ENST00000463004 PPARGP37231 505 aaPredicted RBP12.44□□□□□ -0.42
RBM39-223ENST00000463004 FSCN1Q16658 493 aaKnown RBP12.44□□□□□ -0.42
RBM39-223ENST00000463004 ABHD15Q6UXT9 468 aa12.44□□□□□ -0.42
RBM39-223ENST00000463004 ARHGAP24Q8N264 748 aa12.44□□□□□ -0.42
RBM39-223ENST00000463004 CLEC4DQ8WXI8 215 aa12.44□□□□□ -0.42
RBM39-223ENST00000463004 FDXACB1Q9BRP7 624 aaPredicted RBP12.44□□□□□ -0.42
RBM39-223ENST00000463004 CAPS2Q9BXY5 557 aa12.44□□□□□ -0.42
RBM39-223ENST00000463004 NIFKQ9BYG3 293 aaKnown RBP12.44□□□□□ -0.42
RBM39-223ENST00000463004 AAASQ9NRG9 546 aa12.44□□□□□ -0.42
RBM39-223ENST00000463004 ATP8A1Q9Y2Q0 1164 aa12.44□□□□□ -0.42
RBM39-223ENST00000463004 RASGRF2O14827 1237 aa12.43□□□□□ -0.42
RBM39-223ENST00000463004 ITGB3P05106 788 aa12.43□□□□□ -0.42
RBM39-223ENST00000463004 CYP11B1P15538 503 aa12.43□□□□□ -0.42
RBM39-223ENST00000463004 ARPP19P56211 112 aa12.43□□□□□ -0.42
RBM39-223ENST00000463004 POU5F1Q01860 360 aaKnown RBP12.43□□□□□ -0.42
RBM39-223ENST00000463004 ITKQ08881 620 aa12.43□□□□□ -0.42
RBM39-223ENST00000463004 COL9A3Q14050 684 aaPredicted RBP12.43□□□□□ -0.42
RBM39-223ENST00000463004 KLHL38Q2WGJ6 581 aa12.43□□□□□ -0.42
RBM39-223ENST00000463004 GPAT2Q6NUI2 795 aa12.43□□□□□ -0.42
RBM39-223ENST00000463004 CC2D1AQ6P1N0 951 aaPredicted RBP12.43□□□□□ -0.42
RBM39-223ENST00000463004 ZNF467Q7Z7K2 595 aaPredicted RBP12.43□□□□□ -0.42
RBM39-223ENST00000463004 TMEM161BQ8NDZ6 487 aa12.43□□□□□ -0.42
RBM39-223ENST00000463004 PPTC7Q8NI37 304 aa12.43□□□□□ -0.42
RBM39-223ENST00000463004 GSDMBQ8TAX9 411 aa12.43□□□□□ -0.42
RBM39-223ENST00000463004 FBF1Q8TES7 1133 aa12.43□□□□□ -0.42
RBM39-223ENST00000463004 SNF8Q96H20 258 aa12.43□□□□□ -0.42
RBM39-223ENST00000463004 TMEM117Q9H0C3 514 aa12.43□□□□□ -0.42
RBM39-223ENST00000463004 TRPV2Q9Y5S1 764 aa12.43□□□□□ -0.42
RBM39-223ENST00000463004 MARF1Q9Y4F3 1742 aaKnown RBP12.43□□□□□ -0.42
RBM39-223ENST00000463004 M0R2N6 131 aa12.43□□□□□ -0.42
RBM39-223ENST00000463004 PDGFRAP16234 1089 aa12.43□□□□□ -0.42
RBM39-223ENST00000463004 ADORA2BP29275 332 aa12.43□□□□□ -0.42
RBM39-223ENST00000463004 RASSF2P50749 326 aa12.43□□□□□ -0.42
RBM39-223ENST00000463004 PMS1P54277 932 aaKnown RBP12.43□□□□□ -0.42
RBM39-223ENST00000463004 DUSP28Q4G0W2 176 aa12.43□□□□□ -0.42
RBM39-223ENST00000463004 SPRYD7Q5W111 196 aa12.43□□□□□ -0.42
RBM39-223ENST00000463004 MMS22LQ6ZRQ5 1243 aa12.43□□□□□ -0.42
RBM39-223ENST00000463004 ZDHHC17Q8IUH5 632 aa12.43□□□□□ -0.42
RBM39-223ENST00000463004 PPP4R1Q8TF05 950 aa12.43□□□□□ -0.42
RBM39-223ENST00000463004 SH3TC2Q8TF17 1288 aa12.43□□□□□ -0.42
RBM39-223ENST00000463004 PYROXD1Q8WU10 500 aa12.43□□□□□ -0.42
RBM39-223ENST00000463004 N4BP2Q86UW6 1770 aaPredicted RBP12.43□□□□□ -0.42
RBM39-223ENST00000463004 IGLV3-22A0A075B6J6 115 aa12.43□□□□□ -0.42
RBM39-223ENST00000463004 IQANK1A0A1B0GTG1 560 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms