RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 NASPP49321 788 aaPredicted RBP8.69□□□□□ -1.02
CDC42BPA-210ENST00000462553 CLCNKBP51801 687 aa8.69□□□□□ -1.02
CDC42BPA-210ENST00000462553 SLC12A3P55017 1021 aa8.69□□□□□ -1.02
CDC42BPA-210ENST00000462553 PRKCQQ04759 706 aa8.69□□□□□ -1.02
CDC42BPA-210ENST00000462553 MAPK6Q16659 721 aa8.69□□□□□ -1.02
CDC42BPA-210ENST00000462553 UPP1Q16831 310 aa8.69□□□□□ -1.02
CDC42BPA-210ENST00000462553 ZNF528Q3MIS6 628 aa8.69□□□□□ -1.02
CDC42BPA-210ENST00000462553 PABPC1LQ4VXU2 614 aaKnown RBP8.69□□□□□ -1.02
CDC42BPA-210ENST00000462553 NT5DC1Q5TFE4 455 aa8.69□□□□□ -1.02
CDC42BPA-210ENST00000462553 PDXDC1Q6P996 788 aa8.69□□□□□ -1.02
CDC42BPA-210ENST00000462553 C1orf186Q6ZWK4 172 aa8.69□□□□□ -1.02
CDC42BPA-210ENST00000462553 USP49Q70CQ1 688 aa8.69□□□□□ -1.02
CDC42BPA-210ENST00000462553 ZNF687Q8N1G0 1237 aa8.69□□□□□ -1.02
CDC42BPA-210ENST00000462553 CEP120Q8N960 986 aa8.69□□□□□ -1.02
CDC42BPA-210ENST00000462553 ING5Q8WYH8 240 aa8.69□□□□□ -1.02
CDC42BPA-210ENST00000462553 RUBCNQ92622 972 aa8.69□□□□□ -1.02
CDC42BPA-210ENST00000462553 NELL1Q92832 810 aa8.69□□□□□ -1.02
CDC42BPA-210ENST00000462553 AK8Q96MA6 479 aa8.69□□□□□ -1.02
CDC42BPA-210ENST00000462553 PLA2G2FQ9BZM2 168 aa8.69□□□□□ -1.02
CDC42BPA-210ENST00000462553 ZSCAN16Q9H4T2 348 aaPredicted RBP8.69□□□□□ -1.02
CDC42BPA-210ENST00000462553 POLD4Q9HCU8 107 aa8.69□□□□□ -1.02
CDC42BPA-210ENST00000462553 LTB4R2Q9NPC1 389 aa8.69□□□□□ -1.02
CDC42BPA-210ENST00000462553 BLOC1S4Q9NUP1 217 aa8.69□□□□□ -1.02
CDC42BPA-210ENST00000462553 DLL3Q9NYJ7 618 aa8.69□□□□□ -1.02
CDC42BPA-210ENST00000462553 KCNH3Q9ULD8 1083 aa8.69□□□□□ -1.02
CDC42BPA-210ENST00000462553 GDAQ9Y2T3 454 aa8.69□□□□□ -1.02
CDC42BPA-210ENST00000462553 CDY1Q9Y6F8 540 aa8.69□□□□□ -1.02
CDC42BPA-210ENST00000462553 GREB1Q4ZG55 1949 aa8.69□□□□□ -1.02
CDC42BPA-210ENST00000462553 ZNF638Q14966 1978 aaKnown RBP8.69□□□□□ -1.02
CDC42BPA-210ENST00000462553 SCN1AP35498 2009 aa8.69□□□□□ -1.02
CDC42BPA-210ENST00000462553 ASPMQ8IZT6 3477 aa8.68□□□□□ -1.02
CDC42BPA-210ENST00000462553 KIAA1549LQ6ZVL6 1849 aa8.68□□□□□ -1.02
CDC42BPA-210ENST00000462553 MYO16Q9Y6X6 1858 aa8.68□□□□□ -1.02
CDC42BPA-210ENST00000462553 ATG2BQ96BY7 2078 aa8.68□□□□□ -1.02
CDC42BPA-210ENST00000462553 WDR27A2RRH5 827 aa8.68□□□□□ -1.02
CDC42BPA-210ENST00000462553 SLC26A4O43511 780 aa8.68□□□□□ -1.02
CDC42BPA-210ENST00000462553 LILRB5O75023 590 aa8.68□□□□□ -1.02
CDC42BPA-210ENST00000462553 ECI2O75521 394 aa8.68□□□□□ -1.02
CDC42BPA-210ENST00000462553 F13A1P00488 732 aa8.68□□□□□ -1.02
CDC42BPA-210ENST00000462553 RHOP08100 348 aa8.68□□□□□ -1.02
CDC42BPA-210ENST00000462553 ZSCAN22P10073 491 aaPredicted RBP8.68□□□□□ -1.02
CDC42BPA-210ENST00000462553 LIG1P18858 919 aa8.68□□□□□ -1.02
CDC42BPA-210ENST00000462553 PLCG1P19174 1290 aa8.68□□□□□ -1.02
CDC42BPA-210ENST00000462553 TARSP26639 723 aaKnown RBP8.68□□□□□ -1.02
CDC42BPA-210ENST00000462553 MARCKSP29966 332 aaPredicted RBP8.68□□□□□ -1.02
CDC42BPA-210ENST00000462553 LONP1P36776 959 aaKnown RBP8.68□□□□□ -1.02
CDC42BPA-210ENST00000462553 BRCC3P46736 316 aa8.68□□□□□ -1.02
CDC42BPA-210ENST00000462553 ROR1Q01973 937 aa8.68□□□□□ -1.02
CDC42BPA-210ENST00000462553 FZD5Q13467 585 aa8.68□□□□□ -1.02
CDC42BPA-210ENST00000462553 UBXN2BQ14CS0 331 aa8.68□□□□□ -1.02
CDC42BPA-210ENST00000462553 UVSSAQ2YD98 709 aa8.68□□□□□ -1.02
CDC42BPA-210ENST00000462553 DCAF4L1Q3SXM0 396 aa8.68□□□□□ -1.02
CDC42BPA-210ENST00000462553 SLC44A4Q53GD3 710 aa8.68□□□□□ -1.02
CDC42BPA-210ENST00000462553 ARSHQ5FYA8 562 aa8.68□□□□□ -1.02
CDC42BPA-210ENST00000462553 XKR4Q5GH76 650 aa8.68□□□□□ -1.02
CDC42BPA-210ENST00000462553 PRSS36Q5K4E3 855 aa8.68□□□□□ -1.02
CDC42BPA-210ENST00000462553 FOXD4L5Q5VV16 416 aaPredicted RBP8.68□□□□□ -1.02
CDC42BPA-210ENST00000462553 RINT1Q6NUQ1 792 aa8.68□□□□□ -1.02
CDC42BPA-210ENST00000462553 TAS1R3Q7RTX0 852 aa8.68□□□□□ -1.02
CDC42BPA-210ENST00000462553 DGLUCYQ7Z3D6 616 aa8.68□□□□□ -1.02
CDC42BPA-210ENST00000462553 SPRYD3Q8NCJ5 442 aa8.68□□□□□ -1.02
CDC42BPA-210ENST00000462553 ZBTB44Q8NCP5 570 aa8.68□□□□□ -1.02
CDC42BPA-210ENST00000462553 FOXD4L4Q8WXT5 416 aaPredicted RBP8.68□□□□□ -1.02
CDC42BPA-210ENST00000462553 CLDN23Q96B33 292 aa8.68□□□□□ -1.02
CDC42BPA-210ENST00000462553 SHDQ96IW2 340 aa8.68□□□□□ -1.02
CDC42BPA-210ENST00000462553 CLIC6Q96NY7 704 aa8.68□□□□□ -1.02
CDC42BPA-210ENST00000462553 PLIN2Q99541 437 aa8.68□□□□□ -1.02
CDC42BPA-210ENST00000462553 ADPGKQ9BRR6 497 aa8.68□□□□□ -1.02
CDC42BPA-210ENST00000462553 OSBPL6Q9BZF3 934 aa8.68□□□□□ -1.02
CDC42BPA-210ENST00000462553 AVENQ9NQS1 362 aaPredicted RBP8.68□□□□□ -1.02
CDC42BPA-210ENST00000462553 PRMT8Q9NR22 394 aaPredicted RBP8.68□□□□□ -1.02
CDC42BPA-210ENST00000462553 SPATA6Q9NWH7 488 aaPredicted RBP8.68□□□□□ -1.02
CDC42BPA-210ENST00000462553 FBXO4Q9UKT5 387 aa8.68□□□□□ -1.02
CDC42BPA-210ENST00000462553 POLIQ9UNA4 740 aa8.68□□□□□ -1.02
CDC42BPA-210ENST00000462553 DNM3Q9UQ16 869 aa8.68□□□□□ -1.02
CDC42BPA-210ENST00000462553 SRPRBQ9Y5M8 271 aaKnown RBP8.68□□□□□ -1.02
CDC42BPA-210ENST00000462553 BACE2Q9Y5Z0 518 aa8.68□□□□□ -1.02
CDC42BPA-210ENST00000462553 NCANO14594 1321 aa8.68□□□□□ -1.02
CDC42BPA-210ENST00000462553 A0A087X0B3 334 aa8.67□□□□□ -1.02
CDC42BPA-210ENST00000462553 SMIM28A0A1B0GU29 152 aa8.67□□□□□ -1.02
CDC42BPA-210ENST00000462553 ARHGEF37A1IGU5 675 aa8.67□□□□□ -1.02
CDC42BPA-210ENST00000462553 FAM170BA6NMN3 283 aa8.67□□□□□ -1.02
CDC42BPA-210ENST00000462553 ABLIM1O14639 778 aa8.67□□□□□ -1.02
CDC42BPA-210ENST00000462553 SPTLC1O15269 473 aa8.67□□□□□ -1.02
CDC42BPA-210ENST00000462553 TBC1D4O60343 1298 aa8.67□□□□□ -1.02
CDC42BPA-210ENST00000462553 KINO60870 393 aaKnown RBP8.67□□□□□ -1.02
CDC42BPA-210ENST00000462553 HIP1RO75146 1068 aa8.67□□□□□ -1.02
CDC42BPA-210ENST00000462553 B3GAT3O94766 335 aa8.67□□□□□ -1.02
CDC42BPA-210ENST00000462553 ABLIM3O94929 683 aa8.67□□□□□ -1.02
CDC42BPA-210ENST00000462553 PLA2G4BP0C869 781 aa8.67□□□□□ -1.02
CDC42BPA-210ENST00000462553 TDGF1P13385 188 aa8.67□□□□□ -1.02
CDC42BPA-210ENST00000462553 GUCY2CP25092 1073 aa8.67□□□□□ -1.02
CDC42BPA-210ENST00000462553 CCR2P41597 374 aa8.67□□□□□ -1.02
CDC42BPA-210ENST00000462553 PFKPQ01813 784 aa8.67□□□□□ -1.02
CDC42BPA-210ENST00000462553 CEBPZQ03701 1054 aaKnown RBP8.67□□□□□ -1.02
CDC42BPA-210ENST00000462553 SLC39A14Q15043 492 aa8.67□□□□□ -1.02
CDC42BPA-210ENST00000462553 KARSQ15046 597 aaKnown RBP8.67□□□□□ -1.02
CDC42BPA-210ENST00000462553 ZRSR1Q15695 479 aaKnown RBP8.67□□□□□ -1.02
CDC42BPA-210ENST00000462553 ATF7IP2Q5U623 682 aa8.67□□□□□ -1.02
CDC42BPA-210ENST00000462553 TANGO2Q6ICL3 276 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms