RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 RSAD2Q8WXG1 361 aa10.52□□□□□ -0.73
USP54-207ENST00000451492 ING5Q8WYH8 240 aa10.52□□□□□ -0.73
USP54-207ENST00000451492 CHAMP1Q96JM3 812 aa10.52□□□□□ -0.73
USP54-207ENST00000451492 MYADMQ96S97 322 aa10.52□□□□□ -0.73
USP54-207ENST00000451492 PCIF1Q9H4Z3 704 aa10.52□□□□□ -0.73
USP54-207ENST00000451492 WDR6Q9NNW5 1121 aaKnown RBP10.52□□□□□ -0.73
USP54-207ENST00000451492 CPSF3Q9UKF6 684 aaKnown RBP10.52□□□□□ -0.73
USP54-207ENST00000451492 UBQLN1Q9UMX0 589 aaKnown RBP10.52□□□□□ -0.73
USP54-207ENST00000451492 COL4A3Q01955 1670 aa10.51□□□□□ -0.73
USP54-207ENST00000451492 GOLGA8IPA6NC78 632 aa10.51□□□□□ -0.73
USP54-207ENST00000451492 GOLGA8JA6NMD2 632 aa10.51□□□□□ -0.73
USP54-207ENST00000451492 PRRG1O14668 218 aa10.51□□□□□ -0.73
USP54-207ENST00000451492 NARSO43776 548 aaKnown RBP10.51□□□□□ -0.73
USP54-207ENST00000451492 XYLBO75191 536 aa10.51□□□□□ -0.73
USP54-207ENST00000451492 PRPF6O94906 941 aaKnown RBP10.51□□□□□ -0.73
USP54-207ENST00000451492 OR4Q2P0C623 313 aa10.51□□□□□ -0.73
USP54-207ENST00000451492 ELF1P32519 619 aa10.51□□□□□ -0.73
USP54-207ENST00000451492 RPL9P32969 192 aaKnown RBP10.51□□□□□ -0.73
USP54-207ENST00000451492 ABCD1P33897 745 aa10.51□□□□□ -0.73
USP54-207ENST00000451492 RAB33AQ14088 237 aa10.51□□□□□ -0.73
USP54-207ENST00000451492 KYAT1Q16773 422 aa10.51□□□□□ -0.73
USP54-207ENST00000451492 ZNF280DQ6N043 979 aa10.51□□□□□ -0.73
USP54-207ENST00000451492 CCDC65Q8IXS2 484 aa10.51□□□□□ -0.73
USP54-207ENST00000451492 GPR65Q8IYL9 337 aa10.51□□□□□ -0.73
USP54-207ENST00000451492 GRAMD1CQ8IYS0 662 aa10.51□□□□□ -0.73
USP54-207ENST00000451492 GLIS3Q8NEA6 775 aa10.51□□□□□ -0.73
USP54-207ENST00000451492 HVCN1Q96D96 273 aa10.51□□□□□ -0.73
USP54-207ENST00000451492 FAM122AQ96E09 287 aa10.51□□□□□ -0.73
USP54-207ENST00000451492 ASIC4Q96FT7 647 aa10.51□□□□□ -0.73
USP54-207ENST00000451492 FAM84AQ96KN4 292 aa10.51□□□□□ -0.73
USP54-207ENST00000451492 SUSD3Q96L08 255 aa10.51□□□□□ -0.73
USP54-207ENST00000451492 MFSD14AQ96MC6 490 aa10.51□□□□□ -0.73
USP54-207ENST00000451492 ACCSQ96QU6 501 aa10.51□□□□□ -0.73
USP54-207ENST00000451492 FAM213AQ9BRX8 229 aa10.51□□□□□ -0.73
USP54-207ENST00000451492 PLEKHA5Q9HAU0 1116 aa10.51□□□□□ -0.73
USP54-207ENST00000451492 CYP4F11Q9HBI6 524 aa10.51□□□□□ -0.73
USP54-207ENST00000451492 SEL1LQ9UBV2 794 aa10.51□□□□□ -0.73
USP54-207ENST00000451492 FBXL5Q9UKA1 691 aa10.51□□□□□ -0.73
USP54-207ENST00000451492 USTQ9Y2C2 406 aa10.51□□□□□ -0.73
USP54-207ENST00000451492 H7C4K7 107 aa10.5□□□□□ -0.73
USP54-207ENST00000451492 SYN3O14994 580 aa10.5□□□□□ -0.73
USP54-207ENST00000451492 POLR2DO15514 142 aaKnown RBP10.5□□□□□ -0.73
USP54-207ENST00000451492 PPP1R37O75864 691 aa10.5□□□□□ -0.73
USP54-207ENST00000451492 LRG1P02750 347 aa10.5□□□□□ -0.73
USP54-207ENST00000451492 CFHP08603 1231 aa10.5□□□□□ -0.73
USP54-207ENST00000451492 SCP2P22307 547 aa10.5□□□□□ -0.73
USP54-207ENST00000451492 FSHRP23945 695 aa10.5□□□□□ -0.73
USP54-207ENST00000451492 LRPAP1P30533 357 aa10.5□□□□□ -0.73
USP54-207ENST00000451492 AFMP43652 599 aa10.5□□□□□ -0.73
USP54-207ENST00000451492 VCPP55072 806 aaKnown RBP10.5□□□□□ -0.73
USP54-207ENST00000451492 E2F4Q16254 413 aa10.5□□□□□ -0.73
USP54-207ENST00000451492 SLFN12LQ6IEE8 588 aa10.5□□□□□ -0.73
USP54-207ENST00000451492 EFCAB13Q8IY85 973 aa10.5□□□□□ -0.73
USP54-207ENST00000451492 APPL2Q8NEU8 664 aa10.5□□□□□ -0.73
USP54-207ENST00000451492 KCNG4Q8TDN1 519 aa10.5□□□□□ -0.73
USP54-207ENST00000451492 PGLYRP2Q96PD5 576 aa10.5□□□□□ -0.73
USP54-207ENST00000451492 BLZF1Q9H2G9 400 aa10.5□□□□□ -0.73
USP54-207ENST00000451492 TNMDQ9H2S6 317 aa10.5□□□□□ -0.73
USP54-207ENST00000451492 MFSD1Q9H3U5 465 aa10.5□□□□□ -0.73
USP54-207ENST00000451492 ST6GALNAC4Q9H4F1 302 aa10.5□□□□□ -0.73
USP54-207ENST00000451492 KCNK12Q9HB15 430 aa10.5□□□□□ -0.73
USP54-207ENST00000451492 FAM13BQ9NYF5 915 aa10.5□□□□□ -0.73
USP54-207ENST00000451492 FBXL21Q9UKT6 434 aa10.5□□□□□ -0.73
USP54-207ENST00000451492 PCDHB8Q9UN66 801 aa10.5□□□□□ -0.73
USP54-207ENST00000451492 PCDHA7Q9UN72 937 aa10.5□□□□□ -0.73
USP54-207ENST00000451492 EXOC7Q9UPT5 735 aa10.5□□□□□ -0.73
USP54-207ENST00000451492 BACE2Q9Y5Z0 518 aa10.5□□□□□ -0.73
USP54-207ENST00000451492 MORC2Q9Y6X9 1032 aaPredicted RBP10.5□□□□□ -0.73
USP54-207ENST00000451492 MIA3Q5JRA6 1907 aa10.5□□□□□ -0.73
USP54-207ENST00000451492 FRMD3A2A2Y4 597 aa10.49□□□□□ -0.73
USP54-207ENST00000451492 SEC24AO95486 1093 aa10.49□□□□□ -0.73
USP54-207ENST00000451492 HNRNPA1P09651 372 aaKnown RBP eCLIP10.49□□□□□ -0.73
USP54-207ENST00000451492 ODC1P11926 461 aa10.49□□□□□ -0.73
USP54-207ENST00000451492 CYP3A5P20815 502 aa10.49□□□□□ -0.73
USP54-207ENST00000451492 ADSSP30520 456 aa10.49□□□□□ -0.73
USP54-207ENST00000451492 PLA2G5P39877 138 aa10.49□□□□□ -0.73
USP54-207ENST00000451492 WNT7BP56706 349 aa10.49□□□□□ -0.73
USP54-207ENST00000451492 YWHAHQ04917 246 aaPredicted RBP10.49□□□□□ -0.73
USP54-207ENST00000451492 ADCY1Q08828 1119 aa10.49□□□□□ -0.73
USP54-207ENST00000451492 TDGQ13569 410 aa10.49□□□□□ -0.73
USP54-207ENST00000451492 PABPC1LQ4VXU2 614 aaKnown RBP10.49□□□□□ -0.73
USP54-207ENST00000451492 SPATA1Q5VX52 437 aa10.49□□□□□ -0.73
USP54-207ENST00000451492 C9orf57Q5W0N0 161 aa10.49□□□□□ -0.73
USP54-207ENST00000451492 LMBRD2Q68DH5 695 aaPredicted RBP10.49□□□□□ -0.73
USP54-207ENST00000451492 ARMCX5Q6P1M9 558 aa10.49□□□□□ -0.73
USP54-207ENST00000451492 CRELD2Q6UXH1 353 aaPredicted RBP10.49□□□□□ -0.73
USP54-207ENST00000451492 CYP26C1Q6V0L0 522 aa10.49□□□□□ -0.73
USP54-207ENST00000451492 RNF19BQ6ZMZ0 732 aa10.49□□□□□ -0.73
USP54-207ENST00000451492 USP37Q86T82 979 aa10.49□□□□□ -0.73
USP54-207ENST00000451492 NELFCDQ8IXH7 590 aa10.49□□□□□ -0.73
USP54-207ENST00000451492 UBALD2Q8IYN6 164 aa10.49□□□□□ -0.73
USP54-207ENST00000451492 FBXL6Q8N531 539 aa10.49□□□□□ -0.73
USP54-207ENST00000451492 IQUBQ8NA54 791 aa10.49□□□□□ -0.73
USP54-207ENST00000451492 FLCNQ8NFG4 579 aa10.49□□□□□ -0.73
USP54-207ENST00000451492 ITFG1Q8TB96 612 aa10.49□□□□□ -0.73
USP54-207ENST00000451492 CORO1BQ9BR76 489 aa10.49□□□□□ -0.73
USP54-207ENST00000451492 CBWD1Q9BRT8 395 aa10.49□□□□□ -0.73
USP54-207ENST00000451492 STRA6Q9BX79 667 aa10.49□□□□□ -0.73
USP54-207ENST00000451492 TRIM9Q9C026 710 aa10.49□□□□□ -0.73
USP54-207ENST00000451492 OLFML3Q9NRN5 406 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms