RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 USP6NLQ92738 828 aa16.75■□□□□ 0.27
SNX13-204ENST00000444712 ZBTB10Q96DT7 871 aa16.75■□□□□ 0.27
SNX13-204ENST00000444712 APBA2Q99767 749 aa16.75■□□□□ 0.27
SNX13-204ENST00000444712 GOLGA6L10A0A0M3HER8 536 aa16.75■□□□□ 0.27
SNX13-204ENST00000444712 CCDC66A2RUB6 948 aa16.75■□□□□ 0.27
SNX13-204ENST00000444712 CST3P01034 146 aaPredicted RBP16.75■□□□□ 0.27
SNX13-204ENST00000444712 IQCF3P0C7M6 154 aa16.75■□□□□ 0.27
SNX13-204ENST00000444712 STAG3L1P0CL83 205 aa16.75■□□□□ 0.27
SNX13-204ENST00000444712 CXCL8P10145 99 aa16.75■□□□□ 0.27
SNX13-204ENST00000444712 ATICP31939 592 aa16.75■□□□□ 0.27
SNX13-204ENST00000444712 MESDQ14696 234 aa16.75■□□□□ 0.27
SNX13-204ENST00000444712 DCAF4L1Q3SXM0 396 aa16.75■□□□□ 0.27
SNX13-204ENST00000444712 SAPCD2Q86UD0 394 aa16.75■□□□□ 0.27
SNX13-204ENST00000444712 EFCAB13Q8IY85 973 aa16.75■□□□□ 0.27
SNX13-204ENST00000444712 ELMO3Q96BJ8 720 aa16.75■□□□□ 0.27
SNX13-204ENST00000444712 PLVAPQ9BX97 442 aa16.75■□□□□ 0.27
SNX13-204ENST00000444712 SMIM35A0A1B0GVV1 85 aa16.74■□□□□ 0.27
SNX13-204ENST00000444712 GPR25O00155 361 aa16.74■□□□□ 0.27
SNX13-204ENST00000444712 KRIT1O00522 736 aa16.74■□□□□ 0.27
SNX13-204ENST00000444712 THAP12O43422 761 aa16.74■□□□□ 0.27
SNX13-204ENST00000444712 SASH3O75995 380 aa16.74■□□□□ 0.27
SNX13-204ENST00000444712 ZNF865P0CJ78 1059 aaPredicted RBP16.74■□□□□ 0.27
SNX13-204ENST00000444712 ARF4P18085 180 aaPredicted RBP16.74■□□□□ 0.27
SNX13-204ENST00000444712 CTNNA2P26232 953 aa16.74■□□□□ 0.27
SNX13-204ENST00000444712 EPHB4P54760 987 aa16.74■□□□□ 0.27
SNX13-204ENST00000444712 OSTNP61366 133 aa16.74■□□□□ 0.27
SNX13-204ENST00000444712 CASP8Q14790 479 aa16.74■□□□□ 0.27
SNX13-204ENST00000444712 KIAA0319LQ8IZA0 1049 aa16.74■□□□□ 0.27
SNX13-204ENST00000444712 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.74■□□□□ 0.27
SNX13-204ENST00000444712 KRT12Q99456 494 aa16.74■□□□□ 0.27
SNX13-204ENST00000444712 ZSWIM1Q9BR11 485 aa16.74■□□□□ 0.27
SNX13-204ENST00000444712 KATNAL1Q9BW62 490 aa16.74■□□□□ 0.27
SNX13-204ENST00000444712 GCOM2Q9BZD3 368 aaPredicted RBP16.74■□□□□ 0.27
SNX13-204ENST00000444712 AP5M1Q9H0R1 490 aa16.74■□□□□ 0.27
SNX13-204ENST00000444712 SLITRK6Q9H5Y7 841 aa16.74■□□□□ 0.27
SNX13-204ENST00000444712 FAM124BQ9H5Z6 455 aaPredicted RBP16.74■□□□□ 0.27
SNX13-204ENST00000444712 MRPL47Q9HD33 250 aaKnown RBP16.74■□□□□ 0.27
SNX13-204ENST00000444712 LCMT1Q9UIC8 334 aa16.74■□□□□ 0.27
SNX13-204ENST00000444712 SCINQ9Y6U3 715 aa16.74■□□□□ 0.27
SNX13-204ENST00000444712 TSPAN1O60635 241 aa16.74■□□□□ 0.27
SNX13-204ENST00000444712 LSM8O95777 96 aaKnown RBP16.74■□□□□ 0.27
SNX13-204ENST00000444712 P4HA1P13674 534 aa16.74■□□□□ 0.27
SNX13-204ENST00000444712 PLA2G4AP47712 749 aa16.74■□□□□ 0.27
SNX13-204ENST00000444712 NOMO3P69849 1222 aa16.74■□□□□ 0.27
SNX13-204ENST00000444712 SEL1L2Q5TEA6 688 aa16.74■□□□□ 0.27
SNX13-204ENST00000444712 PHF13Q86YI8 300 aaPredicted RBP16.74■□□□□ 0.27
SNX13-204ENST00000444712 CEP120Q8N960 986 aa16.74■□□□□ 0.27
SNX13-204ENST00000444712 EIF1ADQ8N9N8 165 aaKnown RBP16.74■□□□□ 0.27
SNX13-204ENST00000444712 CCDC102AQ96A19 550 aa16.74■□□□□ 0.27
SNX13-204ENST00000444712 RNPC3Q96LT9 517 aaKnown RBP16.74■□□□□ 0.27
SNX13-204ENST00000444712 DMGDHQ9UI17 866 aaKnown RBP16.74■□□□□ 0.27
SNX13-204ENST00000444712 UMODL1Q5DID0 1318 aa16.73■□□□□ 0.27
SNX13-204ENST00000444712 A0A1B0GUA9 196 aa16.73■□□□□ 0.27
SNX13-204ENST00000444712 DCAF8L1A6NGE4 600 aa16.73■□□□□ 0.27
SNX13-204ENST00000444712 ADCY6O43306 1168 aa16.73■□□□□ 0.27
SNX13-204ENST00000444712 ATMINO43313 823 aaPredicted RBP16.73■□□□□ 0.27
SNX13-204ENST00000444712 SPOPO43791 374 aa16.73■□□□□ 0.27
SNX13-204ENST00000444712 HEXIM1O94992 359 aaKnown RBP16.73■□□□□ 0.27
SNX13-204ENST00000444712 SMIM10L2AP0DMW4 78 aa16.73■□□□□ 0.27
SNX13-204ENST00000444712 SMIM10L2BP0DMW5 78 aa16.73■□□□□ 0.27
SNX13-204ENST00000444712 COMTP21964 271 aa16.73■□□□□ 0.27
SNX13-204ENST00000444712 SLC1A1P43005 524 aa16.73■□□□□ 0.27
SNX13-204ENST00000444712 RNASE9P60153 205 aaKnown RBP16.73■□□□□ 0.27
SNX13-204ENST00000444712 C1QBPQ07021 282 aaKnown RBP16.73■□□□□ 0.27
SNX13-204ENST00000444712 PTPROQ16827 1216 aa16.73■□□□□ 0.27
SNX13-204ENST00000444712 ZNF667Q5HYK9 610 aa16.73■□□□□ 0.27
SNX13-204ENST00000444712 NAA35Q5VZE5 725 aa16.73■□□□□ 0.27
SNX13-204ENST00000444712 EMBQ6PCB8 327 aa16.73■□□□□ 0.27
SNX13-204ENST00000444712 MON1BQ7L1V2 547 aa16.73■□□□□ 0.27
SNX13-204ENST00000444712 CCDC26Q8TAB7 109 aa16.73■□□□□ 0.27
SNX13-204ENST00000444712 ZNF518BQ9C0D4 1074 aa16.73■□□□□ 0.27
SNX13-204ENST00000444712 CISHQ9NSE2 258 aa16.73■□□□□ 0.27
SNX13-204ENST00000444712 C2CD2Q9Y426 696 aa16.73■□□□□ 0.27
SNX13-204ENST00000444712 TMEM110-MUSTN1A8MSY1 372 aa16.72■□□□□ 0.27
SNX13-204ENST00000444712 LACTBL1A8MY62 500 aa16.72■□□□□ 0.27
SNX13-204ENST00000444712 CTNNA1P35221 906 aaKnown RBP16.72■□□□□ 0.27
SNX13-204ENST00000444712 TNNT3P45378 269 aaPredicted RBP16.72■□□□□ 0.27
SNX13-204ENST00000444712 PAK2Q13177 524 aa16.72■□□□□ 0.27
SNX13-204ENST00000444712 MFSD10Q14728 455 aa16.72■□□□□ 0.27
SNX13-204ENST00000444712 MAATS1Q7Z4T9 603 aa16.72■□□□□ 0.27
SNX13-204ENST00000444712 CDR2LQ86X02 465 aaPredicted RBP16.72■□□□□ 0.27
SNX13-204ENST00000444712 AENQ8WTP8 325 aaKnown RBP16.72■□□□□ 0.27
SNX13-204ENST00000444712 CPB2Q96IY4 423 aa16.72■□□□□ 0.27
SNX13-204ENST00000444712 ACAP3Q96P50 834 aa16.72■□□□□ 0.27
SNX13-204ENST00000444712 XYLT2Q9H1B5 865 aa16.72■□□□□ 0.27
SNX13-204ENST00000444712 VRTNQ9H8Y1 702 aa16.72■□□□□ 0.27
SNX13-204ENST00000444712 GDF3Q9NR23 364 aa16.72■□□□□ 0.27
SNX13-204ENST00000444712 SETD4Q9NVD3 440 aa16.72■□□□□ 0.27
SNX13-204ENST00000444712 CEP83Q9Y592 693 aa16.72■□□□□ 0.27
SNX13-204ENST00000444712 MBLAC1A4D2B0 266 aaPredicted RBP16.72■□□□□ 0.27
SNX13-204ENST00000444712 TNPO2O14787 897 aaKnown RBP16.72■□□□□ 0.27
SNX13-204ENST00000444712 FGGP02679 453 aa16.72■□□□□ 0.27
SNX13-204ENST00000444712 GRM5P41594 1212 aa16.72■□□□□ 0.27
SNX13-204ENST00000444712 NNTQ13423 1086 aa16.72■□□□□ 0.27
SNX13-204ENST00000444712 TTC39CQ8N584 583 aa16.72■□□□□ 0.27
SNX13-204ENST00000444712 ZNF606Q8WXB4 792 aa16.72■□□□□ 0.27
SNX13-204ENST00000444712 CPA5Q8WXQ8 436 aa16.72■□□□□ 0.27
SNX13-204ENST00000444712 CD101Q93033 1021 aa16.72■□□□□ 0.27
SNX13-204ENST00000444712 CYFIP2Q96F07 1278 aa16.72■□□□□ 0.27
SNX13-204ENST00000444712 PPP1R16BQ96T49 567 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms