RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 MSTO1Q9BUK6 570 aa15.25■□□□□ 0.03
TREX1-202ENST00000444177 MFSD1Q9H3U5 465 aa15.25■□□□□ 0.03
TREX1-202ENST00000444177 ST6GALNAC4Q9H4F1 302 aa15.25■□□□□ 0.03
TREX1-202ENST00000444177 CIZ1Q9ULV3 898 aaPredicted RBP15.25■□□□□ 0.03
TREX1-202ENST00000444177 DUSP12Q9UNI6 340 aa15.25■□□□□ 0.03
TREX1-202ENST00000444177 ATP6V1DQ9Y5K8 247 aa15.25■□□□□ 0.03
TREX1-202ENST00000444177 BACE2Q9Y5Z0 518 aa15.25■□□□□ 0.03
TREX1-202ENST00000444177 RIF1Q5UIP0 2472 aaKnown RBP15.25■□□□□ 0.03
TREX1-202ENST00000444177 KMT2EQ8IZD2 1858 aa15.25■□□□□ 0.03
TREX1-202ENST00000444177 FRMD3A2A2Y4 597 aa15.24■□□□□ 0.03
TREX1-202ENST00000444177 TISP43B9A030 160 aa15.24■□□□□ 0.03
TREX1-202ENST00000444177 I3L4J1 428 aa15.24■□□□□ 0.03
TREX1-202ENST00000444177 PODXLO00592 558 aa15.24■□□□□ 0.03
TREX1-202ENST00000444177 OGTO15294 1046 aa15.24■□□□□ 0.03
TREX1-202ENST00000444177 NARSO43776 548 aaKnown RBP15.24■□□□□ 0.03
TREX1-202ENST00000444177 C8AP07357 584 aa15.24■□□□□ 0.03
TREX1-202ENST00000444177 FSHRP23945 695 aa15.24■□□□□ 0.03
TREX1-202ENST00000444177 CLCN5P51795 746 aa15.24■□□□□ 0.03
TREX1-202ENST00000444177 CASP5P51878 434 aa15.24■□□□□ 0.03
TREX1-202ENST00000444177 ASIC1P78348 528 aa15.24■□□□□ 0.03
TREX1-202ENST00000444177 KYAT1Q16773 422 aa15.24■□□□□ 0.03
TREX1-202ENST00000444177 UVSSAQ2YD98 709 aa15.24■□□□□ 0.03
TREX1-202ENST00000444177 SLC10A6Q3KNW5 377 aa15.24■□□□□ 0.03
TREX1-202ENST00000444177 ZBTB41Q5SVQ8 909 aa15.24■□□□□ 0.03
TREX1-202ENST00000444177 SLC39A4Q6P5W5 647 aa15.24■□□□□ 0.03
TREX1-202ENST00000444177 ANKS3Q6ZW76 656 aa15.24■□□□□ 0.03
TREX1-202ENST00000444177 GRASPQ7Z6J2 395 aaPredicted RBP15.24■□□□□ 0.03
TREX1-202ENST00000444177 LEO1Q8WVC0 666 aaPredicted RBP15.24■□□□□ 0.03
TREX1-202ENST00000444177 NXPE3Q969Y0 559 aa15.24■□□□□ 0.03
TREX1-202ENST00000444177 C18orf25Q96B23 403 aaPredicted RBP15.24■□□□□ 0.03
TREX1-202ENST00000444177 OLFML3Q9NRN5 406 aa15.24■□□□□ 0.03
TREX1-202ENST00000444177 KBTBD4Q9NVX7 518 aa15.24■□□□□ 0.03
TREX1-202ENST00000444177 RCOR1Q9UKL0 485 aa15.24■□□□□ 0.03
TREX1-202ENST00000444177 FBXL21Q9UKT6 434 aa15.24■□□□□ 0.03
TREX1-202ENST00000444177 EXOC7Q9UPT5 735 aa15.24■□□□□ 0.03
TREX1-202ENST00000444177 CDY1Q9Y6F8 540 aa15.24■□□□□ 0.03
TREX1-202ENST00000444177 PDCD11Q14690 1871 aaKnown RBP15.24■□□□□ 0.03
TREX1-202ENST00000444177 VWA8A3KMH1 1905 aa15.23■□□□□ 0.03
TREX1-202ENST00000444177 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.23■□□□□ 0.03
TREX1-202ENST00000444177 ANKRD63C9JTQ0 380 aa15.23■□□□□ 0.03
TREX1-202ENST00000444177 H0Y858 1186 aa15.23■□□□□ 0.03
TREX1-202ENST00000444177 CCL16O15467 120 aa15.23■□□□□ 0.03
TREX1-202ENST00000444177 GALR2O43603 387 aaPredicted RBP15.23■□□□□ 0.03
TREX1-202ENST00000444177 PPP1R37O75864 691 aa15.23■□□□□ 0.03
TREX1-202ENST00000444177 NPR3P17342 541 aa15.23■□□□□ 0.03
TREX1-202ENST00000444177 HOXA9P31269 272 aa15.23■□□□□ 0.03
TREX1-202ENST00000444177 RPL9P32969 192 aaKnown RBP15.23■□□□□ 0.03
TREX1-202ENST00000444177 NTHL1P78549 312 aa15.23■□□□□ 0.03
TREX1-202ENST00000444177 AMPD3Q01432 767 aa15.23■□□□□ 0.03
TREX1-202ENST00000444177 SPAG1Q07617 926 aa15.23■□□□□ 0.03
TREX1-202ENST00000444177 L1TD1Q5T7N2 865 aaKnown RBP15.23■□□□□ 0.03
TREX1-202ENST00000444177 ADALQ6DHV7 355 aa15.23■□□□□ 0.03
TREX1-202ENST00000444177 GET4Q7L5D6 327 aaPredicted RBP15.23■□□□□ 0.03
TREX1-202ENST00000444177 FLCNQ8NFG4 579 aa15.23■□□□□ 0.03
TREX1-202ENST00000444177 SLC7A14Q8TBB6 771 aa15.23■□□□□ 0.03
TREX1-202ENST00000444177 FAM212AQ96EL1 285 aa15.23■□□□□ 0.03
TREX1-202ENST00000444177 KIF12Q96FN5 646 aa15.23■□□□□ 0.03
TREX1-202ENST00000444177 ACCSQ96QU6 501 aa15.23■□□□□ 0.03
TREX1-202ENST00000444177 PYM1Q9BRP8 204 aaKnown RBP15.23■□□□□ 0.03
TREX1-202ENST00000444177 FGFBP2Q9BYJ0 223 aa15.23■□□□□ 0.03
TREX1-202ENST00000444177 TRIM9Q9C026 710 aa15.23■□□□□ 0.03
TREX1-202ENST00000444177 IRF2BPLQ9H1B7 796 aa15.23■□□□□ 0.03
TREX1-202ENST00000444177 IKZF4Q9H2S9 585 aa15.23■□□□□ 0.03
TREX1-202ENST00000444177 RPF1Q9H9Y2 349 aaKnown RBP15.23■□□□□ 0.03
TREX1-202ENST00000444177 MAGEF1Q9HAY2 307 aa15.23■□□□□ 0.03
TREX1-202ENST00000444177 WNT16Q9UBV4 365 aa15.23■□□□□ 0.03
TREX1-202ENST00000444177 TUBGCP4Q9UGJ1 667 aa15.23■□□□□ 0.03
TREX1-202ENST00000444177 A0A0B4J269 797 aa15.22■□□□□ 0.03
TREX1-202ENST00000444177 ANHXE9PGG2 379 aa15.22■□□□□ 0.03
TREX1-202ENST00000444177 PI15O43692 258 aa15.22■□□□□ 0.03
TREX1-202ENST00000444177 FAM189A1O60320 539 aa15.22■□□□□ 0.03
TREX1-202ENST00000444177 XYLBO75191 536 aa15.22■□□□□ 0.03
TREX1-202ENST00000444177 CFHP08603 1231 aa15.22■□□□□ 0.03
TREX1-202ENST00000444177 KCNA1Q09470 495 aa15.22■□□□□ 0.03
TREX1-202ENST00000444177 ALCAMQ13740 583 aa15.22■□□□□ 0.03
TREX1-202ENST00000444177 ENOX2Q16206 610 aaKnown RBP15.22■□□□□ 0.03
TREX1-202ENST00000444177 SLFN12LQ6IEE8 588 aa15.22■□□□□ 0.03
TREX1-202ENST00000444177 RTL10Q7L3V2 364 aa15.22■□□□□ 0.03
TREX1-202ENST00000444177 CEP57L1Q8IYX8 460 aa15.22■□□□□ 0.03
TREX1-202ENST00000444177 SYCP3Q8IZU3 236 aa15.22■□□□□ 0.03
TREX1-202ENST00000444177 SIX5Q8N196 739 aa15.22■□□□□ 0.03
TREX1-202ENST00000444177 ST13P5Q8NFI4 369 aaPredicted RBP15.22■□□□□ 0.03
TREX1-202ENST00000444177 POMGNT1Q8WZA1 660 aa15.22■□□□□ 0.03
TREX1-202ENST00000444177 ATOH1Q92858 354 aaPredicted RBP15.22■□□□□ 0.03
TREX1-202ENST00000444177 PLEKHA5Q9HAU0 1116 aa15.22■□□□□ 0.03
TREX1-202ENST00000444177 FAM86C1Q9NVL1 165 aa15.22■□□□□ 0.03
TREX1-202ENST00000444177 AGO2Q9UKV8 859 aaKnown RBP15.22■□□□□ 0.03
TREX1-202ENST00000444177 KCNH3Q9ULD8 1083 aa15.22■□□□□ 0.03
TREX1-202ENST00000444177 POLIQ9UNA4 740 aa15.22■□□□□ 0.03
TREX1-202ENST00000444177 NUB1Q9Y5A7 615 aa15.22■□□□□ 0.03
TREX1-202ENST00000444177 PCDHB13Q9Y5F0 798 aa15.22■□□□□ 0.03
TREX1-202ENST00000444177 ZFP37Q9Y6Q3 630 aaPredicted RBP15.22■□□□□ 0.03
TREX1-202ENST00000444177 TTC26A0AVF1 554 aa15.21■□□□□ 0.03
TREX1-202ENST00000444177 LACTBL1A8MY62 500 aa15.21■□□□□ 0.03
TREX1-202ENST00000444177 PRPF6O94906 941 aaKnown RBP15.21■□□□□ 0.03
TREX1-202ENST00000444177 POU2F2P09086 479 aa15.21■□□□□ 0.03
TREX1-202ENST00000444177 PFKFB1P16118 471 aa15.21■□□□□ 0.03
TREX1-202ENST00000444177 HTR4Q13639 388 aa15.21■□□□□ 0.03
TREX1-202ENST00000444177 VARS2Q5ST30 1063 aaKnown RBP15.21■□□□□ 0.03
TREX1-202ENST00000444177 CWF19L1Q69YN2 538 aaKnown RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms