RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 B3GNT5Q9BYG0 378 aa4.75□□□□□ -1.65
LSM1P1-201ENST00000438629 ZNF703Q9H7S9 590 aaPredicted RBP4.75□□□□□ -1.65
LSM1P1-201ENST00000438629 ARMT1Q9H993 441 aa4.75□□□□□ -1.65
LSM1P1-201ENST00000438629 DDX20Q9UHI6 824 aaKnown RBP4.75□□□□□ -1.65
LSM1P1-201ENST00000438629 PCDHA1Q9Y5I3 950 aa4.75□□□□□ -1.65
LSM1P1-201ENST00000438629 GAGE12BA1L429 117 aa4.74□□□□□ -1.65
LSM1P1-201ENST00000438629 CFAP69A5D8W1 941 aa4.74□□□□□ -1.65
LSM1P1-201ENST00000438629 GAGE12HA6NDE8 117 aa4.74□□□□□ -1.65
LSM1P1-201ENST00000438629 TPP1O14773 563 aa4.74□□□□□ -1.65
LSM1P1-201ENST00000438629 FRS3O43559 492 aa4.74□□□□□ -1.65
LSM1P1-201ENST00000438629 PLIN1O60240 522 aa4.74□□□□□ -1.65
LSM1P1-201ENST00000438629 CHEK2O96017 543 aa4.74□□□□□ -1.65
LSM1P1-201ENST00000438629 HLA-DOAP06340 250 aa4.74□□□□□ -1.65
LSM1P1-201ENST00000438629 THP07101 528 aa4.74□□□□□ -1.65
LSM1P1-201ENST00000438629 GJB1P08034 283 aa4.74□□□□□ -1.65
LSM1P1-201ENST00000438629 MYBP10242 640 aa4.74□□□□□ -1.65
LSM1P1-201ENST00000438629 TRIM27P14373 513 aa4.74□□□□□ -1.65
LSM1P1-201ENST00000438629 PHKG2P15735 406 aa4.74□□□□□ -1.65
LSM1P1-201ENST00000438629 ZNF20P17024 532 aa4.74□□□□□ -1.65
LSM1P1-201ENST00000438629 RHCEP18577 417 aa4.74□□□□□ -1.65
LSM1P1-201ENST00000438629 RPL17P18621 184 aaKnown RBP4.74□□□□□ -1.65
LSM1P1-201ENST00000438629 GCSHP23434 173 aa4.74□□□□□ -1.65
LSM1P1-201ENST00000438629 USP14P54578 494 aa4.74□□□□□ -1.65
LSM1P1-201ENST00000438629 ADAM17P78536 824 aa4.74□□□□□ -1.65
LSM1P1-201ENST00000438629 RHDQ02161 417 aa4.74□□□□□ -1.65
LSM1P1-201ENST00000438629 HABP2Q14520 560 aaPredicted RBP4.74□□□□□ -1.65
LSM1P1-201ENST00000438629 R3HDM1Q15032 1099 aaKnown RBP4.74□□□□□ -1.65
LSM1P1-201ENST00000438629 CNN3Q15417 329 aaKnown RBP4.74□□□□□ -1.65
LSM1P1-201ENST00000438629 CSRP2Q16527 193 aa4.74□□□□□ -1.65
LSM1P1-201ENST00000438629 KIAA0753Q2KHM9 967 aa4.74□□□□□ -1.65
LSM1P1-201ENST00000438629 RABL3Q5HYI8 236 aa4.74□□□□□ -1.65
LSM1P1-201ENST00000438629 AGAP9Q5VTM2 703 aa4.74□□□□□ -1.65
LSM1P1-201ENST00000438629 ARMC6Q6NXE6 501 aa4.74□□□□□ -1.65
LSM1P1-201ENST00000438629 FOXR2Q6PJQ5 311 aa4.74□□□□□ -1.65
LSM1P1-201ENST00000438629 FBXO41Q8TF61 875 aa4.74□□□□□ -1.65
LSM1P1-201ENST00000438629 MED15Q96RN5 788 aa4.74□□□□□ -1.65
LSM1P1-201ENST00000438629 PNKPQ96T60 521 aa4.74□□□□□ -1.65
LSM1P1-201ENST00000438629 SARGQ9BW04 601 aa4.74□□□□□ -1.65
LSM1P1-201ENST00000438629 RNPEPQ9H4A4 650 aa4.74□□□□□ -1.65
LSM1P1-201ENST00000438629 RSAD1Q9HA92 442 aa4.74□□□□□ -1.65
LSM1P1-201ENST00000438629 DDX21Q9NR30 783 aaKnown RBP eCLIP4.74□□□□□ -1.65
LSM1P1-201ENST00000438629 FBXO34Q9NWN3 711 aa4.74□□□□□ -1.65
LSM1P1-201ENST00000438629 TPCN1Q9ULQ1 816 aa4.74□□□□□ -1.65
LSM1P1-201ENST00000438629 SORCS3Q9UPU3 1222 aa4.74□□□□□ -1.65
LSM1P1-201ENST00000438629 ISM1B1AKI9 464 aa4.73□□□□□ -1.65
LSM1P1-201ENST00000438629 AGFG2O95081 481 aa4.73□□□□□ -1.65
LSM1P1-201ENST00000438629 SCAF4O95104 1147 aaKnown RBP4.73□□□□□ -1.65
LSM1P1-201ENST00000438629 PEX11BO96011 259 aa4.73□□□□□ -1.65
LSM1P1-201ENST00000438629 ITGB1P05556 798 aa4.73□□□□□ -1.65
LSM1P1-201ENST00000438629 SBK3P0C264 359 aa4.73□□□□□ -1.65
LSM1P1-201ENST00000438629 RARBP10826 455 aa4.73□□□□□ -1.65
LSM1P1-201ENST00000438629 APOBEC3AP31941 199 aaPredicted RBP4.73□□□□□ -1.65
LSM1P1-201ENST00000438629 KCNJ5P48544 419 aa4.73□□□□□ -1.65
LSM1P1-201ENST00000438629 NOMO3P69849 1222 aa4.73□□□□□ -1.65
LSM1P1-201ENST00000438629 PIGFQ07326 219 aa4.73□□□□□ -1.65
LSM1P1-201ENST00000438629 AMOTQ4VCS5 1084 aa4.73□□□□□ -1.65
LSM1P1-201ENST00000438629 FAM102AQ5T9C2 384 aaPredicted RBP4.73□□□□□ -1.65
LSM1P1-201ENST00000438629 LCE3BQ5TA77 95 aa4.73□□□□□ -1.65
LSM1P1-201ENST00000438629 TSHZ3Q63HK5 1081 aa4.73□□□□□ -1.65
LSM1P1-201ENST00000438629 KSR2Q6VAB6 950 aa4.73□□□□□ -1.65
LSM1P1-201ENST00000438629 GDF7Q7Z4P5 450 aa4.73□□□□□ -1.65
LSM1P1-201ENST00000438629 PPP1R3BQ86XI6 285 aa4.73□□□□□ -1.65
LSM1P1-201ENST00000438629 SYT12Q8IV01 421 aa4.73□□□□□ -1.65
LSM1P1-201ENST00000438629 C1orf210Q8IVY1 113 aa4.73□□□□□ -1.65
LSM1P1-201ENST00000438629 FAM156AQ8NDB6 213 aa4.73□□□□□ -1.65
LSM1P1-201ENST00000438629 PLBD2Q8NHP8 589 aa4.73□□□□□ -1.65
LSM1P1-201ENST00000438629 LRTOMTQ8WZ04 291 aa4.73□□□□□ -1.65
LSM1P1-201ENST00000438629 C1orf43Q9BWL3 253 aa4.73□□□□□ -1.65
LSM1P1-201ENST00000438629 SLC46A2Q9BY10 475 aa4.73□□□□□ -1.65
LSM1P1-201ENST00000438629 LRRC27Q9C0I9 530 aa4.73□□□□□ -1.65
LSM1P1-201ENST00000438629 NUP62CLQ9H1M0 184 aa4.73□□□□□ -1.65
LSM1P1-201ENST00000438629 GPR35Q9HC97 309 aa4.73□□□□□ -1.65
LSM1P1-201ENST00000438629 SLAMF7Q9NQ25 335 aa4.73□□□□□ -1.65
LSM1P1-201ENST00000438629 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.73□□□□□ -1.65
LSM1P1-201ENST00000438629 CPA4Q9UI42 421 aa4.73□□□□□ -1.65
LSM1P1-201ENST00000438629 PCDHA6Q9UN73 950 aa4.73□□□□□ -1.65
LSM1P1-201ENST00000438629 NEU2Q9Y3R4 380 aa4.73□□□□□ -1.65
LSM1P1-201ENST00000438629 PAXBP1Q9Y5B6 917 aa4.73□□□□□ -1.65
LSM1P1-201ENST00000438629 ARID1BQ8NFD5 2236 aaPredicted RBP4.73□□□□□ -1.65
LSM1P1-201ENST00000438629 CDHR4A6H8M9 788 aa4.72□□□□□ -1.65
LSM1P1-201ENST00000438629 BTBD11A6QL63 1104 aa4.72□□□□□ -1.65
LSM1P1-201ENST00000438629 LEFTY2O00292 366 aa4.72□□□□□ -1.65
LSM1P1-201ENST00000438629 RNASET2O00584 256 aaKnown RBP4.72□□□□□ -1.65
LSM1P1-201ENST00000438629 MATN4O95460 622 aa4.72□□□□□ -1.65
LSM1P1-201ENST00000438629 NBPF7P0C2Y1 421 aaPredicted RBP4.72□□□□□ -1.65
LSM1P1-201ENST00000438629 SLC6A2P23975 617 aa4.72□□□□□ -1.65
LSM1P1-201ENST00000438629 RNASE9P60153 205 aaKnown RBP4.72□□□□□ -1.65
LSM1P1-201ENST00000438629 ZNF844Q08AG5 666 aa4.72□□□□□ -1.65
LSM1P1-201ENST00000438629 POLD3Q15054 466 aaPredicted RBP4.72□□□□□ -1.65
LSM1P1-201ENST00000438629 SAFBQ15424 915 aaKnown RBP eCLIP4.72□□□□□ -1.65
LSM1P1-201ENST00000438629 SPDYE7PQ495Y7 208 aa4.72□□□□□ -1.65
LSM1P1-201ENST00000438629 NRN1LQ496H8 165 aa4.72□□□□□ -1.65
LSM1P1-201ENST00000438629 USP39Q53GS9 565 aaKnown RBP4.72□□□□□ -1.65
LSM1P1-201ENST00000438629 COBLL1Q53SF7 1204 aa4.72□□□□□ -1.65
LSM1P1-201ENST00000438629 METRNLQ641Q3 311 aa4.72□□□□□ -1.65
LSM1P1-201ENST00000438629 CYB5RLQ6IPT4 315 aa4.72□□□□□ -1.65
LSM1P1-201ENST00000438629 PRRT2Q7Z6L0 340 aaPredicted RBP4.72□□□□□ -1.65
LSM1P1-201ENST00000438629 ZFPM1Q8IX07 1006 aa4.72□□□□□ -1.65
LSM1P1-201ENST00000438629 PALM2Q8IXS6 379 aa4.72□□□□□ -1.65
LSM1P1-201ENST00000438629 SLC17A8Q8NDX2 589 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms