RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 A1CFQ9NQ94 594 aaKnown RBP16.8■□□□□ 0.28
CDH1-202ENST00000422392 USP15Q9Y4E8 981 aaPredicted RBP16.8■□□□□ 0.28
CDH1-202ENST00000422392 PROSCO94903 275 aa16.79■□□□□ 0.28
CDH1-202ENST00000422392 ATP6V1G2O95670 118 aa16.79■□□□□ 0.28
CDH1-202ENST00000422392 OAS1P00973 400 aaKnown RBP16.79■□□□□ 0.28
CDH1-202ENST00000422392 KRT10P13645 584 aa16.79■□□□□ 0.28
CDH1-202ENST00000422392 GTF2H1P32780 548 aa16.79■□□□□ 0.28
CDH1-202ENST00000422392 GSCP56915 257 aaPredicted RBP16.79■□□□□ 0.28
CDH1-202ENST00000422392 KCNJ2P63252 427 aa16.79■□□□□ 0.28
CDH1-202ENST00000422392 CENPCQ03188 943 aa16.79■□□□□ 0.28
CDH1-202ENST00000422392 ZNF365Q70YC5 407 aa16.79■□□□□ 0.28
CDH1-202ENST00000422392 USP37Q86T82 979 aa16.79■□□□□ 0.28
CDH1-202ENST00000422392 SAMD3Q8N6K7 520 aa16.79■□□□□ 0.28
CDH1-202ENST00000422392 GRK7Q8WTQ7 553 aa16.79■□□□□ 0.28
CDH1-202ENST00000422392 SPIRE2Q8WWL2 714 aa16.79■□□□□ 0.28
CDH1-202ENST00000422392 OSBPL8Q9BZF1 889 aa16.79■□□□□ 0.28
CDH1-202ENST00000422392 POLR3FQ9H1D9 316 aaPredicted RBP16.79■□□□□ 0.28
CDH1-202ENST00000422392 AVENQ9NQS1 362 aaPredicted RBP16.79■□□□□ 0.28
CDH1-202ENST00000422392 NAALADL1Q9UQQ1 740 aa16.79■□□□□ 0.28
CDH1-202ENST00000422392 RGS20O76081 388 aa16.79■□□□□ 0.28
CDH1-202ENST00000422392 VNN1O95497 513 aa16.79■□□□□ 0.28
CDH1-202ENST00000422392 CYP1A1P04798 512 aaPredicted RBP16.79■□□□□ 0.28
CDH1-202ENST00000422392 NR3C2P08235 984 aa16.79■□□□□ 0.28
CDH1-202ENST00000422392 LIG4P49917 911 aa16.79■□□□□ 0.28
CDH1-202ENST00000422392 BRDTQ58F21 947 aaPredicted RBP16.79■□□□□ 0.28
CDH1-202ENST00000422392 WDR44Q5JSH3 913 aa16.79■□□□□ 0.28
CDH1-202ENST00000422392 IZUMO3Q5VZ72 239 aa16.79■□□□□ 0.28
CDH1-202ENST00000422392 GSTA5Q7RTV2 222 aa16.79■□□□□ 0.28
CDH1-202ENST00000422392 ADAM33Q9BZ11 813 aa16.79■□□□□ 0.28
CDH1-202ENST00000422392 PDGFDQ9GZP0 370 aaPredicted RBP16.79■□□□□ 0.28
CDH1-202ENST00000422392 RNF146Q9NTX7 359 aa16.79■□□□□ 0.28
CDH1-202ENST00000422392 ADAM22Q9P0K1 906 aa16.79■□□□□ 0.28
CDH1-202ENST00000422392 PNMA3Q9UL41 463 aa16.79■□□□□ 0.28
CDH1-202ENST00000422392 NEU2Q9Y3R4 380 aa16.79■□□□□ 0.28
CDH1-202ENST00000422392 ZNF541Q9H0D2 1346 aa16.78■□□□□ 0.28
CDH1-202ENST00000422392 GSTTP1A0A1W2PQM5 241 aa16.78■□□□□ 0.28
CDH1-202ENST00000422392 ZSCAN5DPP0CG00 497 aa16.78■□□□□ 0.28
CDH1-202ENST00000422392 ETS1P14921 441 aa16.78■□□□□ 0.28
CDH1-202ENST00000422392 SLC1A1P43005 524 aa16.78■□□□□ 0.28
CDH1-202ENST00000422392 PRKCEQ02156 737 aa16.78■□□□□ 0.28
CDH1-202ENST00000422392 MAMLD1Q13495 774 aa16.78■□□□□ 0.28
CDH1-202ENST00000422392 P3H1Q32P28 736 aa16.78■□□□□ 0.28
CDH1-202ENST00000422392 PREPLQ4J6C6 727 aaPredicted RBP16.78■□□□□ 0.28
CDH1-202ENST00000422392 ZFYVE27Q5T4F4 411 aa16.78■□□□□ 0.28
CDH1-202ENST00000422392 CAPN12Q6ZSI9 719 aa16.78■□□□□ 0.28
CDH1-202ENST00000422392 KIF2BQ8N4N8 673 aa16.78■□□□□ 0.28
CDH1-202ENST00000422392 LPAR1Q92633 364 aa16.78■□□□□ 0.28
CDH1-202ENST00000422392 TMEM143Q96AN5 459 aa16.78■□□□□ 0.28
CDH1-202ENST00000422392 ACSF2Q96CM8 615 aaPredicted RBP16.78■□□□□ 0.28
CDH1-202ENST00000422392 TGS1Q96RS0 853 aaKnown RBP16.78■□□□□ 0.28
CDH1-202ENST00000422392 NOD2Q9HC29 1040 aa16.78■□□□□ 0.28
CDH1-202ENST00000422392 PCDHB4Q9Y5E5 795 aa16.78■□□□□ 0.28
CDH1-202ENST00000422392 ACO1P21399 889 aaKnown RBP16.78■□□□□ 0.28
CDH1-202ENST00000422392 RPL7AP62424 266 aaKnown RBP16.78■□□□□ 0.28
CDH1-202ENST00000422392 IRX3P78415 501 aaPredicted RBP16.78■□□□□ 0.28
CDH1-202ENST00000422392 ZACNQ401N2 412 aa16.78■□□□□ 0.28
CDH1-202ENST00000422392 TMEM63BQ5T3F8 832 aa16.78■□□□□ 0.28
CDH1-202ENST00000422392 VSIG10LQ86VR7 867 aa16.78■□□□□ 0.28
CDH1-202ENST00000422392 THOC1Q96FV9 657 aaKnown RBP16.78■□□□□ 0.28
CDH1-202ENST00000422392 FHDC1Q9C0D6 1143 aaPredicted RBP16.78■□□□□ 0.28
CDH1-202ENST00000422392 KIAA1683Q9H0B3 1180 aa16.78■□□□□ 0.28
CDH1-202ENST00000422392 FZD1Q9UP38 647 aa16.78■□□□□ 0.28
CDH1-202ENST00000422392 C4BPAP04003 597 aaKnown RBP16.77■□□□□ 0.28
CDH1-202ENST00000422392 KCNA2P16389 499 aa16.77■□□□□ 0.28
CDH1-202ENST00000422392 GARTP22102 1010 aa16.77■□□□□ 0.28
CDH1-202ENST00000422392 GNA15P30679 374 aa16.77■□□□□ 0.28
CDH1-202ENST00000422392 STX2P32856 288 aa16.77■□□□□ 0.28
CDH1-202ENST00000422392 NCALDP61601 193 aa16.77■□□□□ 0.28
CDH1-202ENST00000422392 NOMO3P69849 1222 aa16.77■□□□□ 0.28
CDH1-202ENST00000422392 TMED2Q15363 201 aa16.77■□□□□ 0.28
CDH1-202ENST00000422392 FKBP1CQ5VVH2 108 aa16.77■□□□□ 0.28
CDH1-202ENST00000422392 CGB2Q6NT52 195 aa16.77■□□□□ 0.28
CDH1-202ENST00000422392 ENOSF1Q7L5Y1 443 aa16.77■□□□□ 0.28
CDH1-202ENST00000422392 CKAP2Q8WWK9 683 aa16.77■□□□□ 0.28
CDH1-202ENST00000422392 RMDN2Q96LZ7 410 aa16.77■□□□□ 0.28
CDH1-202ENST00000422392 PAIP2Q9BPZ3 127 aaKnown RBP16.77■□□□□ 0.28
CDH1-202ENST00000422392 CYP26B1Q9NR63 512 aa16.77■□□□□ 0.28
CDH1-202ENST00000422392 ARHGAP28Q9P2N2 729 aa16.77■□□□□ 0.28
CDH1-202ENST00000422392 ANKFY1Q9P2R3 1169 aa16.77■□□□□ 0.28
CDH1-202ENST00000422392 TRIM33Q9UPN9 1127 aa16.77■□□□□ 0.28
CDH1-202ENST00000422392 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.77■□□□□ 0.28
CDH1-202ENST00000422392 LOC102724159A0A0B4J2E5 919 aa16.77■□□□□ 0.27
CDH1-202ENST00000422392 VWA5AO00534 786 aa16.77■□□□□ 0.27
CDH1-202ENST00000422392 TLR3O15455 904 aaKnown RBP16.77■□□□□ 0.27
CDH1-202ENST00000422392 GSTA1P08263 222 aa16.77■□□□□ 0.27
CDH1-202ENST00000422392 HARSP12081 509 aaKnown RBP16.77■□□□□ 0.27
CDH1-202ENST00000422392 ATF7P17544 494 aaPredicted RBP16.77■□□□□ 0.27
CDH1-202ENST00000422392 MAP3K10Q02779 954 aa16.77■□□□□ 0.27
CDH1-202ENST00000422392 PWP2Q15269 919 aaKnown RBP16.77■□□□□ 0.27
CDH1-202ENST00000422392 CRELD2Q6UXH1 353 aaPredicted RBP16.77■□□□□ 0.27
CDH1-202ENST00000422392 RHOT1Q8IXI2 618 aa16.77■□□□□ 0.27
CDH1-202ENST00000422392 FITM2Q8N6M3 262 aa16.77■□□□□ 0.27
CDH1-202ENST00000422392 MAIP1Q8WWC4 291 aa16.77■□□□□ 0.27
CDH1-202ENST00000422392 HAUS1Q96CS2 278 aa16.77■□□□□ 0.27
CDH1-202ENST00000422392 IFT74Q96LB3 600 aa16.77■□□□□ 0.27
CDH1-202ENST00000422392 RBM15Q96T37 977 aaKnown RBP eCLIP16.77■□□□□ 0.27
CDH1-202ENST00000422392 ECT2Q9H8V3 914 aa16.77■□□□□ 0.27
CDH1-202ENST00000422392 PDLIM7Q9NR12 457 aa16.77■□□□□ 0.27
CDH1-202ENST00000422392 AGO2Q9UKV8 859 aaKnown RBP16.77■□□□□ 0.27
CDH1-202ENST00000422392 EXTL3O43909 919 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms