RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 ANKRD44Q8N8A2 993 aa6.23□□□□□ -1.41
ECHDC1-206ENST00000417628 LSM14AQ8ND56 463 aaKnown RBP6.23□□□□□ -1.41
ECHDC1-206ENST00000417628 BAHD1Q8TBE0 780 aaPredicted RBP6.23□□□□□ -1.41
ECHDC1-206ENST00000417628 ZNF669Q96BR6 464 aaPredicted RBP6.23□□□□□ -1.41
ECHDC1-206ENST00000417628 KLHL5Q96PQ7 755 aa6.23□□□□□ -1.41
ECHDC1-206ENST00000417628 OSBPL6Q9BZF3 934 aa6.23□□□□□ -1.41
ECHDC1-206ENST00000417628 ACAD9Q9H845 621 aa6.23□□□□□ -1.41
ECHDC1-206ENST00000417628 RAVER2Q9HCJ3 691 aaKnown RBP6.23□□□□□ -1.41
ECHDC1-206ENST00000417628 ENTPD7Q9NQZ7 604 aa6.23□□□□□ -1.41
ECHDC1-206ENST00000417628 HOMER2Q9NSB8 354 aa6.23□□□□□ -1.41
ECHDC1-206ENST00000417628 TMEM260Q9NX78 707 aa6.23□□□□□ -1.41
ECHDC1-206ENST00000417628 MKL2Q9ULH7 1088 aa6.23□□□□□ -1.41
ECHDC1-206ENST00000417628 ZKSCAN5Q9Y2L8 839 aa6.23□□□□□ -1.41
ECHDC1-206ENST00000417628 HCFC2Q9Y5Z7 792 aa6.23□□□□□ -1.41
ECHDC1-206ENST00000417628 DENND4AQ7Z401 1863 aa6.23□□□□□ -1.41
ECHDC1-206ENST00000417628 PLXNA4Q9HCM2 1894 aa6.22□□□□□ -1.41
ECHDC1-206ENST00000417628 CCDC189A1A4V9 331 aa6.22□□□□□ -1.41
ECHDC1-206ENST00000417628 DHX16O60231 1041 aaKnown RBP6.22□□□□□ -1.41
ECHDC1-206ENST00000417628 SUSD5O60279 629 aa6.22□□□□□ -1.41
ECHDC1-206ENST00000417628 RNGTTO60942 597 aaKnown RBP6.22□□□□□ -1.41
ECHDC1-206ENST00000417628 ZBED4O75132 1171 aa6.22□□□□□ -1.41
ECHDC1-206ENST00000417628 EIF3JO75822 258 aaKnown RBP6.22□□□□□ -1.41
ECHDC1-206ENST00000417628 ZNF806P0C7X5 589 aa6.22□□□□□ -1.41
ECHDC1-206ENST00000417628 TDGF1P13385 188 aa6.22□□□□□ -1.41
ECHDC1-206ENST00000417628 CD151P48509 253 aa6.22□□□□□ -1.41
ECHDC1-206ENST00000417628 PMS1P54277 932 aaKnown RBP6.22□□□□□ -1.41
ECHDC1-206ENST00000417628 PTPN14Q15678 1187 aa6.22□□□□□ -1.41
ECHDC1-206ENST00000417628 SLC10A6Q3KNW5 377 aa6.22□□□□□ -1.41
ECHDC1-206ENST00000417628 GNPTABQ3T906 1256 aa6.22□□□□□ -1.41
ECHDC1-206ENST00000417628 PAN2Q504Q3 1202 aaKnown RBP6.22□□□□□ -1.41
ECHDC1-206ENST00000417628 ANKRD34AQ69YU3 496 aa6.22□□□□□ -1.41
ECHDC1-206ENST00000417628 NAA16Q6N069 864 aaPredicted RBP6.22□□□□□ -1.41
ECHDC1-206ENST00000417628 FDX2Q6P4F2 183 aa6.22□□□□□ -1.41
ECHDC1-206ENST00000417628 CLEC10AQ8IUN9 316 aa6.22□□□□□ -1.41
ECHDC1-206ENST00000417628 SMYD4Q8IYR2 804 aaPredicted RBP6.22□□□□□ -1.41
ECHDC1-206ENST00000417628 SLC44A3Q8N4M1 653 aa6.22□□□□□ -1.41
ECHDC1-206ENST00000417628 KCT2Q8NC54 265 aa6.22□□□□□ -1.41
ECHDC1-206ENST00000417628 MORC4Q8TE76 937 aa6.22□□□□□ -1.41
ECHDC1-206ENST00000417628 THAP3Q8WTV1 239 aaPredicted RBP6.22□□□□□ -1.41
ECHDC1-206ENST00000417628 RSAD2Q8WXG1 361 aa6.22□□□□□ -1.41
ECHDC1-206ENST00000417628 ANKRD7Q92527 254 aa6.22□□□□□ -1.41
ECHDC1-206ENST00000417628 ERCC4Q92889 916 aaPredicted RBP6.22□□□□□ -1.41
ECHDC1-206ENST00000417628 SGSM3Q96HU1 749 aa6.22□□□□□ -1.41
ECHDC1-206ENST00000417628 CCDC74BQ96LY2 380 aa6.22□□□□□ -1.41
ECHDC1-206ENST00000417628 SLC6A18Q96N87 628 aa6.22□□□□□ -1.41
ECHDC1-206ENST00000417628 TCF25Q9BQ70 676 aa6.22□□□□□ -1.41
ECHDC1-206ENST00000417628 KATNAL1Q9BW62 490 aa6.22□□□□□ -1.41
ECHDC1-206ENST00000417628 A1CFQ9NQ94 594 aaKnown RBP6.22□□□□□ -1.41
ECHDC1-206ENST00000417628 SLC2A4RGQ9NR83 387 aa6.22□□□□□ -1.41
ECHDC1-206ENST00000417628 SUSD2Q9UGT4 822 aa6.22□□□□□ -1.41
ECHDC1-206ENST00000417628 ANAPC4Q9UJX5 808 aa6.22□□□□□ -1.41
ECHDC1-206ENST00000417628 PCDHB12Q9Y5F1 795 aa6.22□□□□□ -1.41
ECHDC1-206ENST00000417628 MYO9AB2RTY4 2548 aa6.22□□□□□ -1.41
ECHDC1-206ENST00000417628 LOC102724159A0A0B4J2E5 919 aa6.21□□□□□ -1.42
ECHDC1-206ENST00000417628 FAM170BA6NMN3 283 aa6.21□□□□□ -1.42
ECHDC1-206ENST00000417628 HIDE1A8MVS5 230 aa6.21□□□□□ -1.42
ECHDC1-206ENST00000417628 PYCARD-AS1I3L0S3 204 aa6.21□□□□□ -1.42
ECHDC1-206ENST00000417628 CAPN9O14815 690 aa6.21□□□□□ -1.42
ECHDC1-206ENST00000417628 CAND2O75155 1236 aa6.21□□□□□ -1.42
ECHDC1-206ENST00000417628 CDC45O75419 566 aa6.21□□□□□ -1.42
ECHDC1-206ENST00000417628 ALDH1L1O75891 902 aa6.21□□□□□ -1.42
ECHDC1-206ENST00000417628 FGF18O76093 207 aa6.21□□□□□ -1.42
ECHDC1-206ENST00000417628 REC8O95072 547 aa6.21□□□□□ -1.42
ECHDC1-206ENST00000417628 IPO7O95373 1038 aaKnown RBP6.21□□□□□ -1.42
ECHDC1-206ENST00000417628 CSRP1P21291 193 aaKnown RBP6.21□□□□□ -1.42
ECHDC1-206ENST00000417628 PREPP48147 710 aa6.21□□□□□ -1.42
ECHDC1-206ENST00000417628 OAZ1P54368 228 aa6.21□□□□□ -1.42
ECHDC1-206ENST00000417628 SARNPP82979 210 aaKnown RBP6.21□□□□□ -1.42
ECHDC1-206ENST00000417628 SSRP1Q08945 709 aaKnown RBP6.21□□□□□ -1.42
ECHDC1-206ENST00000417628 SCAPQ12770 1279 aa6.21□□□□□ -1.42
ECHDC1-206ENST00000417628 PWP2Q15269 919 aaKnown RBP6.21□□□□□ -1.42
ECHDC1-206ENST00000417628 DAB2IPQ5VWQ8 1189 aa6.21□□□□□ -1.42
ECHDC1-206ENST00000417628 Q6ZS46 218 aa6.21□□□□□ -1.42
ECHDC1-206ENST00000417628 RASGRP2Q7LDG7 609 aa6.21□□□□□ -1.42
ECHDC1-206ENST00000417628 SERINC5Q86VE9 423 aa6.21□□□□□ -1.42
ECHDC1-206ENST00000417628 SIAH1Q8IUQ4 282 aa6.21□□□□□ -1.42
ECHDC1-206ENST00000417628 THNSL1Q8IYQ7 743 aa6.21□□□□□ -1.42
ECHDC1-206ENST00000417628 C12orf76Q8N812 135 aaPredicted RBP6.21□□□□□ -1.42
ECHDC1-206ENST00000417628 CYB5D2Q8WUJ1 264 aa6.21□□□□□ -1.42
ECHDC1-206ENST00000417628 APPBP2Q92624 585 aa6.21□□□□□ -1.42
ECHDC1-206ENST00000417628 KAT2BQ92831 832 aa6.21□□□□□ -1.42
ECHDC1-206ENST00000417628 DHRS1Q96LJ7 313 aa6.21□□□□□ -1.42
ECHDC1-206ENST00000417628 ALG1Q9BT22 464 aa6.21□□□□□ -1.42
ECHDC1-206ENST00000417628 DDX23Q9BUQ8 820 aaKnown RBP6.21□□□□□ -1.42
ECHDC1-206ENST00000417628 ACSS3Q9H6R3 686 aa6.21□□□□□ -1.42
ECHDC1-206ENST00000417628 PIDD1Q9HB75 910 aa6.21□□□□□ -1.42
ECHDC1-206ENST00000417628 NGRNQ9NPE2 291 aaKnown RBP6.21□□□□□ -1.42
ECHDC1-206ENST00000417628 LRP2BPQ9P2M1 347 aa6.21□□□□□ -1.42
ECHDC1-206ENST00000417628 SUCOQ9UBS9 1254 aaKnown RBP6.21□□□□□ -1.42
ECHDC1-206ENST00000417628 LZTS1Q9Y250 596 aa6.21□□□□□ -1.42
ECHDC1-206ENST00000417628 RAXQ9Y2V3 346 aa6.21□□□□□ -1.42
ECHDC1-206ENST00000417628 MTF2Q9Y483 593 aaPredicted RBP6.21□□□□□ -1.42
ECHDC1-206ENST00000417628 CNTNAP5Q8WYK1 1306 aa6.21□□□□□ -1.42
ECHDC1-206ENST00000417628 DMXL2Q8TDJ6 3036 aa6.2□□□□□ -1.42
ECHDC1-206ENST00000417628 CACNA1IQ9P0X4 2223 aa6.2□□□□□ -1.42
ECHDC1-206ENST00000417628 C9IYK1 514 aa6.2□□□□□ -1.42
ECHDC1-206ENST00000417628 FAM153BP0C7A2 387 aa6.2□□□□□ -1.42
ECHDC1-206ENST00000417628 RPS9P46781 194 aaKnown RBP6.2□□□□□ -1.42
ECHDC1-206ENST00000417628 GABPAQ06546 454 aa6.2□□□□□ -1.42
ECHDC1-206ENST00000417628 DDX10Q13206 875 aaKnown RBP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms